XLOC_032576 (gene) - C. hemisphaerica

Overview
NameXLOC_032576
Unique NameXLOC_032576
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_201:224476..230766-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032576 ID=XLOC_032576|Name=XLOC_032576|organism=Clytia hemisphaerica|type=gene|length=6291bp|location=Sequence derived from alignment at scaffold_201:224476..230766- (Clytia hemisphaerica)
ATATAGGAAAGAAAATAGAAAAATCAAACTGAAACATGTACATAATGATG AAGCAACGTCACAAAATGGATCCTCAGTAAAACTTACCAAAAAGCATACT ACCAAATCTGGTCAGTTAATCTTTATGCAAACATGACGTCTAGGCAACTC TCAGTGCATAACCAGAATGGATCTAGAAGGTCTCCTGACCAATCAGATTC CTCAACCATATCACACTCCTCACCTGGGCACAGAACACATGCTCCACGGT CAACCACCAGCCAACGAAGAACCACATCCAAACCACTTAACTTTCAACAA GCAATGAGTGATTTCCGTACCATGTTTCCAGAATTGGATACAGACGTTAT TGAAACTGTTTTAAGAGCAAATAATGGTGTTGTTCAAACTACAATAGACC AATTGCTTCAATTACAAGAATCTACGCAGGTTGAGAAAGCACAATCCGGA CCTGTTTTACCAAGTTATGAAAGCTCTATCGGTGATGGGGAAGAGCCACC CCCTGCTTATAACGACATTTGGGAGGACATAGGACCCCCAGAGCCTGATC CATTATTTCCAAATCCAAAAGTGAATGCAAAAATTCAATCACAACAAACT ATTGCAGTTGAAAAGCCAAAGAAATTTCCCAGAAATGCTTTATGGAATGC TCCACTTGTTGGGAAATTACCAAATGACTTTTTGCGAATCGATAATATTG TTTCTACTAATAACTCAAATGCTTTGACTGCTGATTCTAGGGAACAAAGC AATTACATGAACTTGAATAATAAGGATTGTAAACCAAAACATAATGAGAA AGACTTTATGACAGATGATGACTTGGAGAGGTTTATGGAGGACGAAAAAC TTGCTATCTTTCTACAGAACGAAGAATTTCTTAGAGAGCTGCGTAGGAAT AGAGAGTTTGTATCATCACTTGAAGCAGGTATCATTATTTTATAATGGAT AACACTTATCAAAGATAGGGTATATTTCTTTTAAGTTTTAGTCAAGGTTT TTTCCCTTCATTTTAAACAAAAAGAAACATCCTCTTTTTAAAGGTTACTA CTCTCTTATACTCAACTCTTAATTTTTCTTGCTATATTTGTGATACCTTT ATTTAGTTTAATAAAAGCTTTTAAGCCCAAAAATATTCTTCTTTAGATCA CCAGGAAGCTATGATGGCATCTGGAAGTGCAGCTACTCCACCTGCAGCTT CAGTGGGTAGTGGTGGTGCCCGTCCTCGAACTACACCAACACAAGAAGAC GCACAATTTCGTCAAAAATTACGACACATGGGAAAATGTAAGAGAGCCTT CCTTGGAAAATTCAATTGTTTACCACACTATGTTTCATGCTTTTACTTTT GATATACTCACAACATTTTGAAATGTGAAATGCCAGATCTGTTAGAATAC ACACTTTAGTTATTTTGAAAGTAAAGGGTATATTACTGTAAGCTGATCAG ATGATATTTTGTATTTTAATTGGATAAAGGAGGATGTAAAAATGAGATGA TCTTTTAACCACATATTTATTTTATCTTATTGAAGTCATCAGTTCTATCA TAAATCATTATTCATTATCTTTTTCAGCAACAAGGAAAAAGTTTGGAAAA ATGGCAAAGAAATTTTCACGAAACAAATCAAGCGGAAAACCTGCACCTCT TAGGTTAGTGTGCCAACTATCACTGTATTTGTTCTTGGAATCCCAATTTT ATAAAAGAATCTTAAAGATTTTAAAGGTTTTAGCTTAACCTAGGTTATTT TTGTAATCGTTTTTAATAAATGACCCCTAAAAGTTATTGTATTAACGCAA TCTTTGAAGCATCATTCTCTCCTGATTGGAAAATTGTGATATCCAATGCA GTAAGATGTAAAATTTAACAATTGTAGCAAGACAACCTTCTCCTCTACAA TTCTGTGTTTACTTTAATATTTTGAAAGAAAAACAATTGGAATCCTGTAA AAAAAACATGAGAGAAACTTTTTCTATTTTCTGTTAGTATGACATCGTCA GAATCAACATTCAATCTTCTTGGAGATGACGAGGACGAAGAACCTCCAAG AACCACTGACTTGTGTAAACTTTCAAATTAATCATTTTACTTTTTCATTA AAATGCTATTTTAAATCTGGTTACATTGATTTCAAAATTTTACTACGCTG CAATAGAATAATTGCCTATCGTGAATAAGTTTCTATTTTCCAACTGTACA ATCAAGATAATAATTCATTCATCTGAATTTCGGAAGATTCTATTTAAGTC CTCTCCATGTGTTCTGATGCTTAACATGTTTGAACTAAAAAATCATCAAA TAGCTGGGCAAAACCAAACAGGGGGAAATGGGATAAAAAGAAATCTAATT TTTGGACCTACCCCGGTGGAGGTCCTACAAATTAACCTTTGTCCTTTCGT TCGTCTGTTCGTTCGTTCGTTATTAGCTTTCCTCATGATTGGCTCGTTAG TTTTTTCTGATTTTTTGCACAAAGATGAATAACTATAAACCCTCGAATGT GACGGAGCCCGATTTTCAAAAAAAAAATTTTTGGGCAAATTCGGGCCAAA AAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTA ATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCGTAGGTAAAAGA TGGCTTAAGCAGATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAACGCAT GTTTATCTATAAGAATCGCTATCAATAAGCATACATCAATGTTCTTAGTC AAATTACTCAATTTTTTTATGAGATAGATGTTTTTTTTGCTCAGGAGGGC TTACTTTTAAAGAATATGTGTGTTTCGACATGAAATTTTGGTTGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGC CCGATTTTCAAAAAAAAAATTTTGGGGCAAATTTGGGCCAAAAAACGGCT AAAAAATGGGTCTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTC TGATTTTTTGCAGGAAAGTAAGGTACCATCATAGGTAAAAGATGGTTCAA GCGGATTAAATTTTTGCAAAAAAAATTTTGTTGGCTCAAAAAACGCATGT TTATCTATAAGAATCGCTATTAATAAGCATACATCAATGTTCTTAGTCAA ATTACTCAATTTTTTTTATGAGATAGATGTTTTTTTTGCTCATCAGGGCT TACTTTTAAAGAATATATGTGTTTAGACATGAAATTTTGTTTTCTTGGCT TGTTTTTTATAGAAAAACTGGTCAAATTCGATATTTTTCTATAAGCACAC TATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTTATTCTT TATGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGTGGCGG AGCTCGATTTTTGGGAAAAAAATTTTGGGGTAAATTTCAGCTAAAAAACG GCTTGTTATTTTCTGACTTTTTGCATGCAAGTAGGTAAAAAATGGCTCAA GCAAATTTTTGTAAAAAAAGGATTTTTCAGCTCAAAAAACGCATATTTAT TTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAAAATTACTG AATTTTTTGATGAGATATGTTTTTTTGCTCTCGATGTTTTGAATATGAAA GAATATTTCAAGAGCATGAAATTTTGGTCTTATTCTAAACGTGTTTTTTA TAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAA TGATTGTTTAATGGTCACGCTTATGTAGATATCAATTATATATGTGTTAA ATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTGGCTTTTAAATC ATGTTCAATTTAACAGGGTTGCCCTTCATTTAGAGCTGCTTAAGCAAAAC AAATCAGTGTTCAAAATCCCACCGTCTCAGACAGATTACCATCTTAGTGA AATAAATAAAGAGTCTTCCGTCTCAAAATTCTGTATAATTTACTGAAATT CCAAGATTATGTGCTAAATTTTTATGTAAAATCCGTTATCTGTCTCAGAT GAACAACCCTGGTTTGACAACTGACAAATGCAGTATTGNTTATGTAAAAT CCGTTATCTGTCTCAGATGAACAACCTTGGTTTGACCACTGACAAATGCA GTATTGATTTCTTAATTATCATTCTTGAAAACCTTTTTTCAGTTGCCATA GATGAAGATGATGATGATGATATGTTAAATCCTGGTGGTTTTGGTGCCAA TGTTCCTGGTGACCAACGTGAACAAGATAATCCTGATTCTACACCTTTCA ATAAATATGCTGTTCAAGTGAGAACTAATATAATAGATTTTTTTCCTATT CACATAGCACTAACTGTCCTGTGTTTTTTCAACGTTGAAATCGATAACAG TGTTGTTTGTCCCATTAAATTGCTTGAAAAAGGTACTTTCATACTTCAAG CCACTAAAAATCTCAAAGGAAACTCAGGCAAAGTATTGCTACAGCCGGCG ATAAGCTTTAATTTCCGATTTTTGAAAACTCAATCATTGATTTTGTACTA TTGTCATCACAAATTATATACATTGATGTTCTCAATATATTTCAACATTT CAAAACATTGGGAAATATTTAGTTTATTATTTGATATCTTCTCCTTCTTC TTTAGAATGAAAACAAAAGAGCCAGACCAAGACCTTCAGTCAAAGGTGGA CGACAATTACCCAAACCACCAGGTACCGCCACATCCACCACCACCACAAC CACAAACAATGGGGTGGCTGATGAACCTATTGTCTTTTATAGTGAAGATA ATGAGTTTGCATTCAAAAATGAATGAGAGTGAAGGAGTATCATTTTCTCA CTAGTGTTGCTCGTACTTTTCATTTTACTTTCCTTTCAAAAACGAAAATT TCTTTTTTTCTAGTTGATTGTTGATATCAATAGATAAATACAGTCAATTG ATTACGTAGGTAGCCCAGTAATCTAGAACTTTTAAGTCTTTCAATTGTTC TTACGGGGCCTACGACCAGCTGGCTTAGCTTTCTGAGAACTGAACAGAAT ATTGGAAGGAGTGGGGATTCGAACCGCGATCACAATCAGTTTTCCTTCTC TTTTAAAGTCTCGTCAGTTTCATCTGGTTAATGGTTTCTTTTCTCCCGCC CTCGAATTTCAAAGTAGTCAGACTCCTCACATTTCTTTGTAAAAATATTT CTTAAAATTCACGTAAAGTGGCTACTCAAACTTGACCCTTTAGGGTAAAT AAAGTTAATTTTTTTAATTTTCTCCATATATAGTACCTATGGAAAATGGC CGGTTCATTATTTTAGCGTTATTCGTATTTACCCGTTTAGCTCATTTTTA TGTTTGTTTATGTTTTTTTTTCGGCGTTTCGGGTTTTATCTTTTATACAA AATTTTATTTCTAAAAATTCTTTCTTTGCTTTTAATGAGCAAAATTTCGT TGTAATTGAAATTTTTCCTTTTCTTTTTGTATTTATATATATTTTCAATT GTTTTTGCTTTAATGTACATAGTACCTTTTCGATACACCATATTTTTTAC TAAAATACCTTTCTAACTTCGTTTAACTTTTGAATGAATATATCACCTTA TATTTCGCCAATTATTTTGAAAAAAGACTGAATTTCTATTGTTGTTTCTT TCTAGGGATATTTAGAAAAAAAAATCAAAAAAGTTGAATTTTGTGGGGCT CAATATTTTGTTTTGAAAGGTAAGGTGAACCGACTTGTTCCAATATTTTC ACACATTATTCATAAAAATACCATATCATTTTCATTCTAGACATTTAGTT TTAGGTATAAGTAATAATTATATTATTATTATTATTTTTGGAGAATTTAA TTTATTTCTTTGTTTTATGTTTGTTTTAAGAAAAAATATTATTTGTGATA GCCCCCCCCTATAAAATAGCTTGTAAATTATAGAAAAACCTCATTTAAGT ACGTCGCTTTAGATTTTTTTTATCATAAAGTTTTTGTTTTAAATTTTTCC CTCTATATAATTCAACATTTTATTCAGTCCGAAAAAATATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051405TCONS_00051405Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051405-proteinTCONS_00051405-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:224476..230766 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.25 3.29 1.45 1.42 30.8 23.92 26.46 26.85 16.45 17.9 17.89 12.62 16.24 14.55 11.34 11.76 16.81 17.23 11.39 15.26 18.25 18.1 11.86 13.77 21.13 20.58 16.4 12.51 10.87 10.11