XLOC_032667 (gene) - C. hemisphaerica

Overview
NameXLOC_032667
Unique NameXLOC_032667
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_202:1180556..1184920+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032667 ID=XLOC_032667|Name=XLOC_032667|organism=Clytia hemisphaerica|type=gene|length=4365bp|location=Sequence derived from alignment at scaffold_202:1180556..1184920+ (Clytia hemisphaerica)
ATTTTGTAATGAGGTGATTACGCTGTACCCGACTGAGTGGCCTGCGttca ttgaaattttccttGTTCGTCTggaaaactttctttttatagGGGAAGTA caggtatttttttcatttctgtttATAAACACTGAAAGTTTGAGGGTGTT AGGATCATCAGGTCTTGCAGTGCTTCCTTTCATATTGTATTGCGTTTTAT ACAGTTTATTTCATTATTACATATTCGGATAATAAACTTCACCATTTTGA ACATTTGAATATAACTAGGGAATCGAAAAGAATTATATTGAACTTCAATT TGGAGGtaaaaatgtttatatttttaacaaATACCTAGATTTACTGTTTT AATTACAGGGTGGCCAGAGCTCAGTCAGGGATATCCTTGCAATACTCCTT TAGGAGAACGCAACAgtctatagaccttttttcaaagaggacgtcctgtt gaataattatgtagtccagccataaaaacaatgatagtgtACTGTATcaa gcatattgtaataattatgcatggttttatcattgtttttctgctggact acataattattcaacagggtggcctctttgaaaaaaggtctctatcagga ttagaaactaggctaggcTTATCTCTTTTATCTCTCCCtgccctttacaa caatacaatgctgacaagttgacacaacacattgactaGTAATCCCTGta gagagaagtttatattgaaatctgcgacaaaaaacgaaagtggtttcttc tactgattgcttcctggCGCTCCTTCatagctgtttatcaaatttccacc aatgagattgccaCATTTCACACGACCTTTCTATGTATTTTTGGAAGATA GTATGTATTTTGAAAGATACCGGTAGTATTTTTGTTCACTGGAAAGTATT CTTTCCataaaactaaaaatcttcaaattttgacaattttttatttttcg atgacatcattgtttatgacgtcatttccttaatatctcctgacatattt attttcagatataggttgtgacctttttttatcagtttttcatgctcttt cgattgcaacaaaaacttttcaattttactactttttattttggttgcca tagtaaccagtgacgtcagtttccatggcaacaggTGATCACACCCaacc ccacctctcaaattttgatcttctacattcaaggaacaactTTTAGcact taaatattttttgtagcttTAAAAACATGGCATAGCACAGTTGAGAGATA AAGGTTGTCTGTCGACTTAAGACAAATTTACTATAAATAAGACTCAATAA TTCCAAAAATAACACACAAATTTCTTTGACAATATGGAGGGCTCATGCAC CAACAAAAAACATTCTAGAATTTTAGCACTAGAAAAAGGGCAAACTCAAA CAAATAATGTATCTTGAAGCTAATCAATAACATCATAACCTGTCATCGCA ATTAACAGAAGGTTTCTTTTGGTATTACTTATTGACTTTATTTTAACGCA TGGTGTATTCTTATTTTGTTTGTAGGTTGAAATGGCTGAAGAAGGAAAAC CGCAAACAAAAAgacttgaaaatattgaaaataatggCTTTGGTCCATTG CCGAAAGCTCGTGGCATGCGTGATACTATCCTCTTCAGTTTACTAGTCCT TCTTGTGTATTTAAGCAGTGCTGCAGTATACCGAAATTTTTACCAAGGAA AACGAGCTCTACTTTCACAAGATGTTGGAGATGCCTTTGTAATACTTTTT GGAATCTGTCTTGGGGAGTTGTTGCGCTCAATTGTGCTTTACGGAGAGGA GAAGAATCACACAGTATCGCGATATTCAAACTCTCATTGGAGGGCTTTAC AGGCTTGTGTTCCATACTCTTGGAAGCAAATTTGTGTTTTCAAGGTAAAA TTGGTTTTTTAACATTATTGGAAGTAGTATGTTGAAGATGTCTGACTTTT CTTAACTTACAGGGTTGATTACAAAAGacttctgaattttttttatcaac atAGGGCTGATAAATTTTAAACTCCCTCCTCCCATGCTGTTATCAAACAA GATTTTTCGAAACAAAGTTTTACCCTTTTTGGAAACAATTTTCCCAACCA TGTCCATCAGCATCagaggaattttttattttttatttttttatcactgT TTTTAAAGAGATTTAATCTGATTGATTTAAATTTTTNAGTATCGCGATAT TCAAACTCTCATTGGAAGGCTTTACAGGCTTGTGTTCCATACTCTTGGAA GCAAATTTGTGTTTTCAAGGTAAAATTGGTCTTTTAACATTATTGGAAAT AGTATGTTGAAGATGTCTGACTTTTCTTAACTTACGGATTTGATTACAAa agacttttgaattttttttatcaacatAGGGCTGATAAATTTTAAACTCC CTCCTCCCATGCTGttatcaaacaaaatttttcgaaacaaAGTTTTACCC TTTTTGGAAACAATTTTCCCAACCATGTCCATCAGCATCAgaggaatttt tttattttttatttttttatcactgtttttaaagagatttaatctgatta atttaaattttcattttagattatttttttggTTATATCTTTTTGTGGAA CTGCTGTATACtggatttttgctgaaaaggtgtcGTTCAATGCATTCCAT TTGTTATCCATAACAGTTTTCAGTGCAATCAATCAAGTGGTTCTGTCCAA AGCTGAAGTCTCCCATTTGAATGAAACTGAAAACAAACATGTTGCTGATG GCCTTGCATGGAGTTATTACTTTGGCTACCTCAAAATCATGTTGCCTGGT ATGAAAGGAATGTTGGCTTTAGCTCAAGGAGATGAGTACAAAATTGATGG CGAAGATATTCGTGATAAATTATCTTCAGAAAAGCTTCACATTGTGATTC CCAAAAATTGTTACACCTATGATTCTTTTAAAGAAGTAGATAAAAGAATC ACTTTTAAATGCAGTATGCCACCAATCAAGAAAACCAGAGGAGGAGTTCA AGAGCGTGTCTACAAGAATactgtttgggaggtaaaactTGAAGATGATG AAGAACCACTGTACGTGCTTATGGAATATGCCACACCTGTCCTATCCATG TATGAcatgaagaaagaagaaagtgCTCACTTCCATGGACAGGATCTTGA AGACCAAGTTAAAGAATTTACAACCAAACTGCAGAAGATTTTggatgaag atgaagaatgcAAAAATAAGTATGAAATTGTCTTATGCGGTGATGTCAAA TCCCAAAAACTCAGCGAGATCATGCGCAGAACCATtcaaaaggaaaagga aaataaagaaaaggatAAAAACATATAAGCTAACATAATGGTagttttga attgaaatatgaaatgaAGTTCCCAGGAAAAAAACCGATTCcaccttttt ttatttcagaagtGGTATATTTCCAATCACAGCTATTTTTGGACCCAGGG ATGTAATAGCGTTTGAGAATGTATATGCCGAACAGGCCACTGAACACTGA GCCAACTCTATAGAGAgatttgatttttgtgaaaaagtttacaaaatcAA CGAAAAAGTGTTCCTCAGAgatacaattttgaaaaaatttctaaccTTAG AGACCTTAGAGAGATCTTTTCTTGGTttccaaaaaaggaaaaatcccaac cttagagagacttgaattttttttctaaactccTAGTGATCGTCTGCACA TACCCAGAActatttttgcctaaattcCTCTCCCCCGTTTTTCAGTAACT ACTATGTTGTGAACAGTATTAAATCATTTAAGATAATAACCCACTGAGAA CTGTAGAATCTTTCCAATAAATGTGACATGAAGTCAGAAAACTGGAAACT TCTCAAAACTAAAGTTTGGATGGGCTATAACTATCATGACTATAGTTTTG CGTTTTTGtgaattattaaaaaatattaaatttaagTTTTAGGGTAATTT GAAGGGCTAGTTTTTGTCTCGTTTGTATATACCCTTTTCAAGccattttt gtagattttctcaattttcCATACATCATCCCGAATCTTATTGTATAATT GAAAACTTTTgtctttaaattttatttttagtatCAATCTTTGTATGGAT TTATTAAACACAAAACTTATAAAAGCGACACCATTTTCACAAGTATTTTT AACGATTATCAAGtatagaaaacaatttttaggataaaatataatgttta ttgttgtttttgtaATGTTTTAATTCTTTTATTCCTTGTTAATGGAAGAA ATTTATTCCATAATCTTGTTGTAAAAGGTGAATGTATTAAAATAAGCAGG TTATATTGTAAGAATTCTTTATTTGAAAGACACATATGATTGAAAAAGTT GCGCTAATAGCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051573TCONS_00051573Clytia hemisphaericatranscript
TCONS_00051574TCONS_00051574Clytia hemisphaericatranscript
TCONS_00051575TCONS_00051575Clytia hemisphaericatranscript
TCONS_00051576TCONS_00051576Clytia hemisphaericatranscript
TCONS_00051577TCONS_00051577Clytia hemisphaericatranscript
TCONS_00051578TCONS_00051578Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051574-proteinTCONS_00051574-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1180556..1184920 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM173stimulator of interferon genes protein isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.21 7.37 2.95 1.22 8.29 6.59 15.11 19.03 32.02 53.73 35.53 33.77 65.9 63.74 93.62 80.84 33.01 32.7 59.42 87.51 25.9 24.5 36.94 39.47 36.2 34.87 74.41 90.57 49.09 41.72