XLOC_032749 (gene) - C. hemisphaerica

Overview
NameXLOC_032749
Unique NameXLOC_032749
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_203:9665..19987+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032749 ID=XLOC_032749|Name=XLOC_032749|organism=Clytia hemisphaerica|type=gene|length=10323bp|location=Sequence derived from alignment at scaffold_203:9665..19987+ (Clytia hemisphaerica)
tttttattctaagaaataaataaatcaaataaaaaatcaaaacaaacaca aagagcatgttaaaagttgtgTAATCGTTGGTCAATCGTTGGTTgcaaag gattttcaaaaaagtaaaatgtaagtgaaaaatttgaatcaaagtaaaat gtaagtgaaaaatttgaatcaaaaaattttggtcgCCAACTGGCAGGGTA CtctaacttggtctaatgttgacatccctctctCGTCTAAATTTGACACC CTTTTGTAGATCTAGAGTAGAGCTGAAAAATAAAggtcgaaattattttt ctttgcttagtggttcCCTTAcagataaatcttttttcaatcaccgattc caactttcatattattcctatctctaaagaagggtgtcgaaattagaaga cagatgtcgaaattagaccaAAATACGGTATGATGGACggagaatagacc ttttcacctttctatccgccatattgaatggtatgcaaaaattatggtgg ccgaattgccatgGTGagattcccttagaaagtatgcaaaacatatgcaa aaagaaagtattaatataaaacttacgtgcataattggcattatattaaa gtgtaatcttgtagaaaaaaaattaaatttgcttctcttgaagactaaaa ataattatatttgcTCATCAACTCTTAGAACAAGcccttcaaaaaaccat aacattagacataaactcaagctgaaaaatcaccagtGAAGGTACAAAAA TGAACCTTATTTGGCTGACTGTaaaaattattctcctgggaatagaacag CCAAATGATCGATTTAAAGCATTGATCTGAACCCCCCTGATTTACAGCTG CTTTTACTAACGTGTTGCATTTGACCTTGTCcagttttgatattttcttg cACGGGTaagaatgtgtgacgtcataattattgctttcagggtgttttaa aagtttgatgtgtgtactccgtctttgtggaattttttaatggcatgaaa acagaatatgccttgtctttaagaacaaatttctaaaaggcttttgttgt tttaACGTTATATTGATTCAAaaggttaaaataaaaaaagtacaaagcta actttggaaaaatatacaagaCTATATATGGAAAATATTGTCTCTAATTC AGTACTGTCTCTAGTTCGGTACTGTTGTTTTGTATGAGATCCCTATTTCC ACACTcagattcttgtcacttttccaGAATCTGTTTGGTTTTTTTTCTGG GATAACCGGCACAACTTTTAAGATTCGTTTGGAAAGTGTTTGGCTCATTT TTCTTCAACTGCCCAAAGTCCTGGTTTTTTCCCtctagaaaagtggcaaa ggaatcttagtgtggaagtgggaatcttatacaaaacaacggtaccatag aacagaaaaaaacatgggacggcaattcagccaccatttcaccgaacctc caaagtcatttgatttgagttaatgaacagcgaattaaaaaatactcaat ttttctttcgcatcaagtaggcttttaaatcgaaatatgaaaaaaatctg tagtggaacacatgcgaatgtctggaacaaagaagaccatattagtggca aaacgatggagcttTTGACGTCatgcggcaagttacacactcattatttg ttaatcccgCAGATCCTGGCATGGAAAGAATAGGTCTTGCAGGAAAGTCA TTCTTGTGAAATTTTATCAATCCCATCTAAACAAGGGGTTGTCTCCCTAT CAGTTTGAGATACTAATATACTAATGCTACACAAATAAAATATACTTANG TGTCTCCCTATCAGTTTGAGATACTAATATACTAATGCTACACAAATAAA ATATACTTACTAAATTGACAATGTTTTGGGGCTAGTTAAGCTGTCAGCAG TCTCATTCAACAAGTATgggaaaaaataatgaaaaatatgttGTTGTGAA CTATATCACTTTATCACTTTATTCACTTTATCATCCACCACATACACTCT CTTTCATGTGTGAGAAATTTCTGCGGAGAACTTTCTAACATTTTTATCTT ATATCATACTGTAAAtcacgaaatttaatacacattaaaaaattccagac AGTGGCATTTGCAAAACTGAGTATTCACGAAACATGtttcttggaaaaaa attagtacCCACAAAAATATACACACtttacaatcaaggtcataatattt tgataattttggttattttaacgtttttcaagatttaaagttccggcgag aaagtcgattttgggctgtNGTCATAATTATTGCTTTCAGGGTGTTTtaa aagtttgatgtgtgtactccgtctttgtggaattttttaatggcatgaaa acagaatatgccttgtctttaagaacaaatttctaaaaggcttttgttgt tttaACGTTATATTGATTCAAaaggttaaaataaaaaaagtacaaagcta actttggaaaaatatacaagaCTATATATGGAAAATATTGTCTCTAATTC AGTACTGTCTCTAGTTCGGTACTGTTGTTTTGTATGAGATCCCTATTTCC ACACTcagattcttgtcacttttccaGAATCTGTTTGGTTTTTTTTCTGG GATAACCGGCACAACTTTTAAGATTCGTTTGGAAAGTGTTTGGCTCATTT TTCTTCAACTGCCCAAAGTCCTGGTTTTTTCCCtctagaaaagtggcaaa ggaatcttagtgtggaagtgggaatcttatacaaaacaacggtaccatag aacagaaaaaaacatgggacggcaattcagccaccatttcaccgaacctc caaagtcatttgatttgagttaatgaacagcgaattaaaaaatactcaat ttttctttcgcatcaagtaggcttttaaatcgaaatatgaaaaaaatctg tagtggaacacatgcgaatgtctggaacaaagaagaccatattagtggca aaacgatggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNGGTaagaatgtgtgacgtcataattattgctttcagggtgttt taaaagtttgatgtgtgtactccgtctttgtggaattttttaatggcatg aaaacagaatatgccttgtctttaagaacaaatttctaaaaggcttttgt tgttttaACGTTATATTGATTCAAaaggttaaaataaaaaaagtacaaag ctaactttggaaaaatatacaagaCTATATATGGAAAATATTGTCTCTAA TTCAGTACTGTCTCTAGTTCGGTACTGTTGTTTTGTATGAGATCCCTATT TCCACACTcagattcttgtcacttttccaGAATCTGTTTGGTTTTTTTTC TGGGATAACCGGCACAACTTTTAAGATTCGTTTGGAAAGTGTTTGGCTCA TTTTTCTTCAACTGCCCAAAGTCCTGGTTTTTTCCCtctagaaaagtggc aaaggaatcttagtgtggaagtgggaatcttatacaaaacaacggtacca tagaacagaaaaaaacatgggacggcaattcagccaccatttcaccgaac ctccaaagtcatttgatttgagttaatgaacagcaaattaaaaaatacac aatttttctttcgcaccaagtaggcttttaaatcgaaatatgaaaaaaat ctgtagtggaacacatgcgaatgtctggaacaaagaagaccatattagtg gcaaaacgatagAGCTTTTGACGTCatgcggcaagttacacactcattat ttgttaatcccgCAGATCCTGGCATGGAAAGAATAGGTCTTGCAGGAAAG TCATTCTTGTGAAATTTTATCAATCCCATCTAAACAAGGGGTTGTCTCCC TATCAGTTTGAGATACTAATATACTAATGCTACACAAATAAAATATACTT ACTAAATTGACAATGTTTTGGGGCTAGAAGCTGTCAGCAGTCTCATTCAA CAAGTATgggaaaaaataatgaaaaatatgttGTTGTGAACTATATCACT TTATTCACTTTATCATCCACCACATACACTCTCTTTCATGTGTGAGAAAT TTCTGCGGAGAACTTTCTAACATTTTTATCTTATATAAAATGCATATCAT ACTGTAAAtcacgaaatttaatacacattaaaaaattccagacAGTGGCA TTTGCAAAACTGAGTATTCAAGAAACATGtttcttggaaaaaaattggtA CCCACAAAAATATACACACTTTAGGTATTTATGTGACTTTTTCTCACCAT ATGACAAGAATGTCATTTTCCTTATTTTAAGAGAAAAGGTGTTTTCCAAG TGAGTAGAATTTTCAGAGGTGTTCCTTTTTATCTGTAGATGGTTGTAGCA GTTTTCACATATTACattgttttctattttagatTGAAAGCTATTCTGGA ATTGAAAGAAGGAAGCAGTGAAAGTCTCACTCATATCACAACAGTTATCA ATGAAACCTACCCTGGTGCTTCTGCTGCCACTGTTCATGAATGTCTTGTC AATGCATTCCCTGATCTTCAAGCACAACAGAGCAATGACCAGGAAGAGAT TTATTACTTGGGAATCAAATTGAATAATTACATTACAACAGAAGACAGAG TTGTTGATTGGTAAAACATTTATGTTTCTAATCCACtcaataattttatt ttattctgaaaaatgttaTGATAACATTTTATGCAAATatactttaaggg aagaaactttcgcgtttttggcacttttggcattttttcgcgaaagtttc tgccaggtaataAATTAACcaagaaattcgcgaaagttaatttcgcgaaa aatgagattttcctaaaaatcgcgaaagttttttccaagttttaaaagcc gAGGAGAGTCGACATTATCGATATTATTGCAGTGACTAGGATTCGGAATG GGAGGAAGAAGtgcaaatagtttatttttcatttattagcatATCACTCG TTCGATCTAAGAAAGAAATGAGATttgaagtaatttttcattCACTTTCC CCAGCCACTCGCGAAAGTTATTGCAGCTAAAATTGACACAAAAAACCGCT AAAAGTTTCCTCTGCAAATTTTCTTCTAaaagtaaaaatcgcgaaactta aatccgcgaaatttcgcaACTTTTCGCTCTCCCAAAGGTTTCTGcccgca aaagtttctgcccttaaagtatctATAAGCTTTCACCTAAGCTTCTAGAT TCAAATCACACTGCTGCTTTGTACAACCAGTGTAGATTTCAATTCATGTT TTCTCTCGAAAATTCTCAGTTTTGGTATTCCACCACAGCACTTTCACATG CATCCACTGTTTCTGCCAGGTTGAAAACACGATTCAAAGAAGATAAATAT GGGAGCATTTCTGTCAGTACTGTATCAGATATTGCAAACAAGGAAATCGG ATTCCAGAGGAGTAGTTTGATTGGTACATACCTTCGAAAAGCATTTCCTG AAGTGTATGTACGTCGATCAGATCGGTTGAGATGGTATTGTGGAATCACT TTGCCAGAGAAAGTCATGACTGAAGAAGAGCGACAGAGAGTTGCTTGGCT GGAAGCTGCTTGTGCATGGtaagtcattttttttttagtgAAAAGGGGTT AAAACAGGTTAAAATGAGTTTATTATTTGTTTGGTAATGCAGCTATTCTA AATGTCAAGTGCCTTTGGTTTGATGACCGAATGGTGATTATcggaaagaa ataaaaagttttcaaattaatCGATTTCAATTTGTACAGTATGCCAGTAC TCGAAGCTTTTTGAATTTCCAGGTTGAGACAAAATGTGAAGCGTCACGAG AATGGTAGAGAAAAATGCTCgttgatttttgctgcactcaTTCAGTACAT TGGTAAAGTGGGCGTAGAGAGTTGTTTGGCTGCCGTCAAATGTGTTTTCC CAAGCATCCAGCGAAAAACGTTCGACCGCACAGCGTATTACTGTGACATC CAACTGCGTGAACACGTGGATCGTGATGAAATTCAAGTTACAGAAAGCAA GAAGACGAAAGCAGACCTACGTGTCTTACCACCCATcactgaagaagaaa aagaaatggtCTTATGGTGCGTCTTATTTTTCAACATTATCACTCTCTTA AGAAATTCTAGTCTTCTGCTAGAGGATTCTAAGGAAAAGGTTCGTTATTG GAAGTACTTTGATCAGACTTGACATTAATGATAATTCGTACGGAAAAACA CCTACCGGAAGGTTTCTACCTAATTTATGAATACATACTCTGCTTATACT TTCAAACCTATACTTTTAATTTTGGTGTGTTGCACTAGTAAAGTTACCTG GGGTTTTCTCAAACAGTGACATTTCATTGTCAGATTTCATCAAAAGATTG CTATAGGAGCTCATAAACTTTcataaaatgtatttttgaagCATTGGACA TACtacaaaaagaaattgtcacatttaaaagattttgttgcATGAAATGG AAAACCCACTaccggtatttcttgaatttctggTGTTAACTCGGCAAATT TCCACCTGAATGCTTGATTATATTTCGAAACATTAAAACCTATAAAGCTA TAAAAAATACCATTGATGCTTTGTACTGGAGGGTTTATTGGTTTTGATCA TTTACAATTTTTGtgcctaaaaagaaaaacaacccTATAGCTATCATTCT TATACCTTTGACTATTTTTTAACTAGAAAAAATTTGTAACTTTGTATTTC AGCTAAGCCCTGCCAAGTTCGAAGTGGTAAATCTTTCACTCAAATGGCTA ATTGAATAAAGAGAAAGTGCATTTCTGTCAGTGTTGTGAAAAACCCCCAC ACCTAGCGGAAGGTGTGTTTACGAATTATCATTGACGTGCTTCTTCTTCA AAGCCGAATCATTCCTATAGCGGGTGACATTGTGTTTTTCCGCCTATAAC TGATAAAACCTACCATGTAAACAATGTGAATATTATCTGCTTTTCAGGTT ACGTAACACGATTCAAATAATGGAACGTCATCGCGAACGATTGAGCGACA TTCGTTGTATGATGATCGCCAAACTACAAGAAGACATCAGTGAGAAAGGA TGCTTGAAGTTCCTTCGCAAAGCCTTCCCTGCCATCGTCTATCGCAAGCG TGAAGGCGTAGCGTACGTTGGAGGTGTGGNAGTTCCTTCGCAAAGCCTTC CCTACCATCGTCTATCGCAAGCGTGAAGGCGTAGCGTACGTTGGAGGTGT GGAAATCAAAGAACAGTTTCGTCCTAAAGAGCCTTGGGTAGAGAAAGCTG TCGAGTGGTAAGCACTAGATTGTTAATTATAAATGCCGTATTCCCTCTAA TAAGCGACTGGcctttatttaattttcgtgACTTTAGGTGAGGGGCTTAT AAGAGGGCGGTGCTTATAAGAGGGCGGCGCTTATTTCAATATTTCAGATT TCAGGTTTCTGAAGTTTTTGTCTAATCTTCGAATTCGATCGGTTGGTTGG GTATCCTTAGAAAAAGAgttcttgctataaaatttgggGGTAAGTAACGT ACGAGAAAACCAAATTTCTTTGCTTTTCAACGAAcagcaaaatttctaaa atatcaTATGAGGAACAAGAATTGTAAACAAAGCTATCTAGAACTTTCTG TAGATGACTATTGCAATAAGAAAACTATACAATTCGAGTAAAAGTATTAA AAtctcattttctcttgattttcgTCGCATTTGAAGGTGCAGTGCTTATT AGAGGGCGGCACTCAtttcgaaattcaaattttaggtGCGGCGCTTATTA AAGGGCGGCGCTTATTGGAGGAAAGGTACTCAAGCCAGGCAAAGAAAAGC TCGGGGAAGGGATATGGATTCGACAATACACTCTTCTccagatgcataaa tttattgttgtcctcgttttcaaacagatttcattgctatgaaaaaTTAT ACATCTAAACCAATTTAAATTCCCAAAAGGCAAACATTAACTCtgaaaca aaagtacttgaaattcaaaatgtctcatgaggtgtaaacaacacaattat cattgtgaaaatgtaattttatagcaatgaaatctgtttgaaacgaggac aacaatgaacttatgcatctcgagaagagtgtatttaaGGGGAAGTTAGT TTTCTGTCTTAATTCGGTATTGTATTAGAAagacccggggggggtactag ggcaaaatgggttacggggatgctccgctggtcagggtaccttttttaac ctccacgagtccctggtagggtcgcaaaaacaccaaaatagaaaaattag tccctcgtagggtgcctatttttggaaaattcggggaaaaagtagaaatt ttgagaaaattttggaatttcagtcccattcagggtcacttttttcgcaa atttcgagtcccacgtagggtccatttttcgaacctcggcggagcacccc cgtcggtcaacaagggtagtaccccccccgggtagAAAGATTTACTTCAA AGCTATCTGACTATGATCACAGCACTTAAAAACGGAGCTTAACCATTTTG TTTGTTCTAAACAATACACAGGGTGAAGAAGATTATCATAGAGTGTGAGG AACAACACGTGGAAAAATACCATCCCATCAATATCGTATTACGTAAAGGT TTACAGACCACCAACCAATCCAAAATCAACCGCGTCTTTAATTTGGCCTT CCCGAACACGGAGATAAAAAAGACGCATGACGGTCGAATAGTGAACGGGG TGACGTTGCTACCGAATTACGCGGACGTCGATTTACCCGTGTTCACAGAG GAAGATTTTTGTGGTGATTTTACGGACATCGATATGAATGAAAGTCAAAA TGAGGACGAAGCGAGCGCTTCCTTCAACACCACACTCGATATTTCAGGTA ATATGCCATATTGTGTTGATCAGTAAAGGTTGCTTGTATTGTAAATAATG TAATGTAAACGCTTCCTTCCCGATCTAGCTATGCATTTTTCTCAATTCTT CGTCCGTAAGTGTGTATTACATACTTGGAAAATTGCGATTGTTTGGACCT TAAGGGGTGATTTTCGCACGTGGTGTGATACCAACATTTAGGATCAAAAT AGTTGAAATATAGTGAAGTTGAGCCATTGATTACACATCATGATTTTTCT TCAGGTGTTTCGATGGTTAACAGAACGAGTACCAGCGGAATGGCTTCAAA CATCAACGTCTCCGGTAAGGTTCTCTTCTTTTTTAGAAAGAAGTCTAAAG AAACCGATTTTTCTAACCATCTATTTTGTCAATCTTCGTTGTGCTTAGCA TTAATACGGAAAATGTTGATCTTTTTTGTTCCATAGATAACATGAAACTT CGTCAACTTTGTGAGAAAGTGGATGCGCTGAACGGACTCGTCAGTAAGTT CGTTTTTTACCTTTCTCCTTTTTTAAGGGTGTACCAAACGTTTCAACGAA AGATTTAAAACAGTCTCTCAAAGATTTAGTTTTTCTACATATCACCTTTT CCGTAAAAACGGACTGTCTAAAGGATCAGAGTTTTGATCCTTTGTATCCA TTGGCAATATCGAACCTTCTTTTTGCGTGGCTTATTTTTTGTGAAGACCT GATCGATTCACCGATTcgaaatttgatttctttttctttttcagctaACA TGAGTAAAGAGATCAAAATTCTACACGAGCAATTAGATCATTCATCGCGC CAGAAAGATTCGTTGATCGTTCAGTTGCAGCAAGCCTTGATGCTTCTCAC ACAACAACAATACTCTAAAATACTCAACATCCGGACCGGGGCCGGAGAAG AAGaggaagacgtcgtcgaaaaatGCGATGAGACTACAACCGTGGTAGGA GAAGAAAGCGTAGCGGCCGAGCTCGTTCAAAATGACGCTGACCTTCTACA ATGAGGACTCTGTGTATCTCGATGAACTAACTTTCGATCTTTCAAATTTC TGTGATAGTAAATATTCATTTTATTAGAAAAAGGATGGTTGATTCGAACT GGATGGATTGTATCCGGCATTTCGGGGCTGTTTGTTGAACAACATTGTCA TTATATATTCAAAGCTATTTAGTTtctatatttcgttgttttgtCCATCG GTAGGAAttggtttttctttttgaggATTGTTGTCAATGCATCATTTTTT GTAGTTTTATCTTGTCAGGATGGTTCAAtgtgtttgatttttttattgta atttttatttcCATTATATTATATCGAGtaatgtaaatattttaaaaagc taAAGAGACATTGAAAGAAATGGAACGAAGTAAATAATATTCCTCAGGCG TTTGTTATTACGGACTTCAAAGAGAAGAGAGGAAAGTTCGACCAAGCGAA TGTCTGTTGTGTGGTTGTTCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051718TCONS_00051718Clytia hemisphaericatranscript
TCONS_00051719TCONS_00051719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051718-proteinTCONS_00051718-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_203supercontigscaffold_203:9665..19987 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
35.16 33.17 81.13 83.54 92.1 71.06 65.2 71.6 43.65 49.13 40.14 33.16 26.25 25.31 29.79 34.26 45.27 45.44 21.07 22.93 31.64 32.65 38.73 36.06 64.21 56.56 23.17 17.11 27.93 30.64