XLOC_032808 (gene) - C. hemisphaerica

Overview
NameXLOC_032808
Unique NameXLOC_032808
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_205:319677..322951+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032808 ID=XLOC_032808|Name=XLOC_032808|organism=Clytia hemisphaerica|type=gene|length=3275bp|location=Sequence derived from alignment at scaffold_205:319677..322951+ (Clytia hemisphaerica)
CACCACCACCTCCTCCACCTCCACCAGGTTTTGGCCCACCTCCACCGCCC
CCACCTCCAGGACCACCAGGTATGGGAGGACCTCCCCCACCACCTCCTCC
TCCTGGAGGTGGTCCACCAGGACCGCCACCCCCACCAGGGGCTCCCCCAC
CACCAGGAGGATTTAGAGCTGGTCCTCAACTTCCTGCTGGATTAacacaa
aagaagaaattcaacCCTAAGAAACAACCGAAAAGAATTAATTGGGATCC
CATTCACGTCACCAAAATCAAAGGCGGATCATTCTGGACCAAAGTCAAAG
AAGAAAAACTGGAGAAGGAGGATTTCTTAGATCTCTTGTCTGAAACTTTC
GCATCCAAACCTGGGAAAAGAATTGGTGACCCCGGACCAGGAGGGGGTGG
CGCCGCAAccgaagaaaaacaaaagaagggACACGAGCTTAAAGTTTTGG
ATGGAAAAACTGCTCAAAATCTTTGTAAGTGATAACTTAACTGAATCAAT
CAACATCCttgaattattttaaagaatgtCGACAAAATGCTTACGATTTT
CCACTACTTCATTTTTCACTCAAGTTTGGCTCAAATCAGTCACGTTTTGA
CAAGTTTATCATTTacaatttttagccattttcgtTGGATCATTTGGTTC
CAAAATGTCGTATGAGGATATCAAGAAGAGAATTCTGGAGTTTGATGAAG
AAATTATCGACAGCAGCGCTCTTGAGAACATGCAAAAATTACTGCCAACT
AAAGAACAGGTANAAATTATCGACAGCAGCGCTCTTGAGAACATGCAAAA
ATTACTACCAACTAAAGAACAGGTGACTCTATCAAATATGAACAAATGAA
TTTTTTCATGCAGAAACTAGTAGaaagtcatcattttcaaaatgtttaat
tttcatgaaataaaatcTTGAGGCTAATTCTCTTCAAATTCATCGTCACA
ACAATGAACTTTTTTTCTCTAGATGGACCAACTGAAAGCATTCCAAAGTG
AATATGACCATCTCAATAAATCAGAACAGTTTGCCTTGGTTGTAAGTCTA
ATCTTTGTTTGTTCATCTACAGTATCGTAATTGTaatattgttttcgaaa
atccgcaaagcttttgattggtcaagcgctgaaattctgttgtaatgtca
cgtgacctcgTTAGGATTTCCTACCGAAATAcggcacgacatctagccct
tacggctttataaatctgttcATACAGTGCTGATGAGTCCCAATAAGGAc
aaaatgcatatgctgctctgctaCTCAATCTCCtaaaagaagatagttgg
acagaaagtCTTTGAATTTCTCTAAATATGCATTTTGGTGGTTATCGTAT
TTTCTAGATCTCATCGATTCCTCGGTTAGAACAACGTATCAATTGCATGA
AAGCCAAACTTGACTTCCTCGAACAAATGGTTGACGTTAAACCGGTGAGT
CTGACGCatttaataaaaacaatttgtaaatttttgacaTTGTTTCGTAA
ATACGAAAGCAAATTTCTTCAAGGTATCTTGACTTTTATTGCATTTGATC
TTTTTTTAGGATCTTGCGAATGCCATTGAATCATGCAAAGAAGTTAAAAA
CAGCCCAAGGTGGTCCAGATTCTTAGAGGTGGGTGTTATCTGTTCCCTGA
CGAcaatgtcaaaataaaattctatGTAATTCAGGCAGTATATTCCCACT
TAATCAACAAGTTAAGCCCAGTGCAAGCCTGAATAACTGAAATTGAGTTT
CTAATATTTACTCTTGTTTCGAAAACTCTTAATGTTATTCTgtgcttttt
ttttctttttagctctTGTTACTGGTGGGAAACTACATGAACTCTGGCAC
CAAGAAATCACAAGCTTTTGGTTTTGATTTGAACGTGTTGACCAAGGTTT
GATTTCAGTATCATATACCGTCATTTATCTAATCAAAAAGTCTACGATTG
AGGTGCTAAAACCTTTTCTTGTGACTTTAAactcaaaatgtttttatacT
ATTTTCAACAGATTGGCAACACAAAATCAGCAGACGGTAAATTGACGTTA
ACACATTTCTTAGCTGAGATGATCCAAGAAAAATATCCTGAAGTCGATGG
ATGGGAAAACGATCTGTCTCATCTTAAAGAAGGCCATCGAGGTAATATCT
CACTTTCAAATCCCATGACAACTGCAACTTTCTGATCGTGAAATTTTGGG
ATTCGCTCTTTGTTTTGAGCTTTTCGACTTTCAGCTATTAAGTGTCCACA
TTNGTTTGGGATTCGCTCTTTGTAAGAGCTTTTCGACTTTCAGCTATTAA
AAGTGTCcacatttcaaaatgtttaagtGACTTTAGGACCAACAATCCTG
CTTTTGCATAAGTTCAAATATTGGGCTTTGCGAATTGAAAGGTTTGCTTA
AACTGGTTGCCTAGGGTTTCTAGTTTTACCAGAGGTGACGGATATGTAGC
GGAATTTCAAATATCAACCCTTGGAAAAGAAAGAACTGCCATTTTTTTAA
TCCATTTATAATGTTCGATATTTTCCGTACTCTTGACCTTTGGGAAGTAA
AATTTCCCCTTCAGAACTGATGCCACTCTTCTTTCTTGCATTACAGTATC
AGACGAGCAAACGACGAAAACAGTGAACGGTTTGAATGCCATGTTGACGA
GGATTCGAAACGAATTGAAACATCATGATACGCCTTTCTCTGCTGATGAT
AAATTTGGAAACAAAATGACCGTATCTTTTCACGCCTGAAATCGTTTTAC
TGCTTTCcaaattttacttttatatcatttttagcGGTGTCCACCACTAA
AGTTTCTTTGTTTCGGATTTCAATTTTGCGATATCAGGAGTGGCACAGGT
AACGTTAGTCAGCTCGAAACCATCGCGCGGTGTTTTCATTGCCACTCTAG
GGTATCATAAAAAACCTAGAAGACTCAAGAATTAGCTTTAAAATGAAGGA
AtataataaatcaataaattaaTTCATAATGAATAAGGCATGTTTCTAGT
TCACTTTGGGAGAAAGAGAATTTTCTTTTAGTTCGAGACCTGTCGGTCTT
TTTATTAGGTCATAAGCCTCAGAATTTTAACCATCCTCAACGTGTTCGCC
GTatcgaaaactgtcaaaaaagttttgtcagaTCGAACACTAGCGGTCTC
TTTGAtctccacgagcccaaaaaagaggtcaaaaaaggGCTTAAATTTAG
GTAATGAGCCTCATGGCTGAAATTTTACAGGTGATTAGTACAACCCTTCA
ggacaatgaaaatcgaaaatctaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051828TCONS_00051828Clytia hemisphaericatranscript
TCONS_00051829TCONS_00051829Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051828-proteinTCONS_00051828-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:319677..322951 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.52	26.83	15.92	13.94	90.56	71.18	83.66	92.73	58.94	72.56	62.18	53.09	65.61	65.67	51.6	58.53	62.66	61.56	51.22	54.33	45.08	49.3	38.69	41.97	51.55	48.4	48.79	44.66	49.81	51.93