XLOC_032822 (gene) - C. hemisphaerica

Overview
NameXLOC_032822
Unique NameXLOC_032822
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_205:163466..171715-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032822 ID=XLOC_032822|Name=XLOC_032822|organism=Clytia hemisphaerica|type=gene|length=8250bp|location=Sequence derived from alignment at scaffold_205:163466..171715- (Clytia hemisphaerica)
CAATATTTTAAATACTGTGGAGCTAATTTGTACCTTGATGGCCAACTTGG
GACAGATTTTGGAGTTAAACTCCCTTTTGAAAAACTTTAATTAGCTCCAT
TAGATTATTTGCTTGTCTTATCGGTTTGTGGGGAATTTTAGTTTGACGTA
GACTTGGTGGGATGCGGCTCTACGTGTTCACAACAACTTTGGTCTGCAGT
GCAGAAAAACACTGAAAGCGGTCAGATCCATTATATCAAACAATCCCAGT
CCAGCACTCAAATTCACAAGATGGTAAGTTTTTTTCATCACTTTACTCAT
TTGAGATGGTTAAGGATATTTGATGTCATCCCTGATAATCGAGTTTGATG
TTGAATTACACACAAAAGGAAGTCCTCTCTGGTTTTTTTTAAATTGCTGC
ATTGCTGTCAGTAGACTAGACTGTCGGACTGTTTACCAAATTTCAGTCAA
TAAGATTGTTTCATTTCACATGGTCCTTCTTTTCAGTCCCAGTGTTGGCC
TCACAGTGCCTAACATGAGGGGTGGCTGCAACATTCATAACATATCTTTT
TATTTGTTTCAATCCGTGATCCTAAGGCTTTTTCATAAGTTTCATTTAAT
TATTGCTTTTATCAAAATGGGGGATTCGGAAAATTTTTACATTTTACATG
TTTAATTTTTGCTCAAACCCCAGTTTGCAGAATATGGCAGAAACTGTTAA
GATTTCCAGGGCAGACAGTGCTCTTTTGTGAGAGGCAGGAGGAGAATAAT
TTGATCAAATTTTAATCTCGCTCAGGGTCGGAAAAGCTTAAAATTTCAAA
ATTTTAACCATTTTCAATGGCGTATTACTTCTAATAAAACGCCCCCTTCT
TTTAAATGCCCCCCTCGAATAAACGCCCCTCCTAAAAGGAAAATTATTTA
ATAAACGCACCCTATTCCAGCGGTATATAACACTGTGGACACGGGCTAGA
CGGCAAATTGGTAAAATGCCGAACGTTTTGCAACATTTTGAAAATTGTTT
GCCGACGGGAGAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGAAAATGTATTT
GAAGGCTGAAACTTTGTATGTTTATCAGAAAAAGGGTGAGGAATTCAAAA
ATCACATTCGCTAATTTTAGTTCTTTCATTTTCATGTAGATTTTTTCATT
TTTTTGTTTCTTTTGCATGGGAATGTCCCAAAAAAAAGTTTTTTTTTCTG
CCGAAATGGATTTTCTTTTCATTTGGGGTTTCTCCTTTCAGAAAAACTTA
TTCTTTACTCATAAGTTTTTGTTCCTCCATTTCCAGAGGTCCCTTGAAAA
TGGGTCCTACCACCTTTTTTGACTCATTTCAACCTTTTCCAAGCTACTTT
TATTCAAAAACAAAAATAAAACAATGCAATGTCTTCTTTTTTCAAAAAAA
GATATATCTTTCGTTATTTTGATAAATATACTAAATAAATATTTTATAAT
ATTTTTATATAATAATATTCTAACCTGTTCTAACACCATCAAAGAATTCT
CCCTCCAAATTTCAGGTCTCTAACTACACTAGAAAAAGAGATATGCAAAA
TTGAAGAAGCATGACTGGAAAAATTTTTTTCTTCTCTTTTTTGACACATT
TTTCGAATTTTTCCAAGCTATTTTCCTAACCTTTTTTTTGACATTTTTAG
TCAAATTTTTGACACTAAAATTTGAATATCTTTACAACCACTTATCCTCT
GGAGGCCTTTGACCCCTCATTTTCTTTCTTTTTCAAAGCTCTACAAGATA
GGATAGGTTTTGAAAAAAAAATTAAAATTTGAAAAATCTTCTGGAGTTGC
TAGGAGGGGCGTTTATTAGAAACTTGTGACTTTAATACTTCAATACCAGT
GTTGATTGGGTTTGAAAAGGAAGATTTAAGTCATTGTAACCAGAGCAGTT
TTCGATGCAATTTTAGTTGTTGAACCAAAGGAACTTTGCACTATAATCCT
GATAAAGAACTAAAACAAAGGGTACACATCGCTACCTTAATTCAAAAGGG
GCCTAAGTCCAGGTACCCCCCAGTTCAAAAGGGGCCTAAGTCCATTTTAA
TGAAATTTGAGATCTTTAGTTTTTCTCAATCTCTGGCTCATTTGCTCTCT
TTTGATGTACATAACAAGTAGTTTTTAAAGTTAAAAAGGTTCAAAACTTC
ATACTGAAGCTCTGATAAAAGTGATGTTTAATTCAAAAGAGGCCTAAGTC
CATCATCTTTTTACAATTAAGGGCCTAAGTCCATCAACTTTTTACAATAA
AAAGGCCTAAGTCCACCAAAATAAGTTTGTTAAGTTTTGAAGAGGCCTAA
GTCCAATTAATTTGCAAATGGGCCTAAGTCCATGCATTCTAAAAAGTTTA
ATTGAGTTTTTCTTTATTTTACTGAGATTGTCTTTTCTCTTTATCTTGAA
TCTAGGTGTAAGTGGTTTTATTTTGGAGTGTCATATGTGCANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTTAATTCAAAAAAGGCCTAAGTCC
ACTCTGCAAGATTTACTAAGTTGCACCTGTTACATACAAAAATACATTCC
TTTCAAACGAATGCCTTTTCATTGGAAAAAAAACTTATAGCTATGGCTTT
CAGAAAACATTTACTTCAAAGCTTTACCATCAAAAATGGTTTCAGAATCA
AGGAAAAACTTTAATTTCAATTTTCTCAAAATGACCCAAATGGACTTAGG
CCCCTTTTGAATTAAGGCTCACAGGACTTAGGCCCCTTTTGAATTAAGGT
AGCGACATTTGCTCTAAATATTCTACTTAAGACTAAAATACTTTAATAAA
CGCCCCCTTCTTTTAAACGCCCCCTCAAATAAACGCCCCTCGTAAAATCA
AAAAAATTTAAACACCCCTTTATTCGAAGTAATATGGTGTATATATTTTG
AGCAAGTTTGGCCATTTCAAGGGCAGGGTTTTTAATTTTCCACATTGGCT
AATTCTAGTTCTTTCATTTTCATGTAGTTTTTTTTTAACTTGTTTGCTTC
TCTAACATGGGAATGCCCCTAACATTGAAGTCAAGTTTGAAGATATTCTT
TATTAGAAAAACAGTTAAAAGCAGTCAAAACGCAATTTACCTTACCTCCT
GAGTTTGTCTTTGTTATGCTAAAATATAACAAACCTTTGTCATGTTGTCT
AATTACAAAAACCTCCAATCACTACTTCTCTGCCATCTTGTTTCACTTTA
AATGCGGTGTTTTAAAATTCCTTAGCTACATTATATGTACGGAAAAGGTT
TTCTCCAGGTTTTTTCAATCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTTCT
TTCTGTTCTAATATATGCAAATCACGTCGAAAAAAGAATATATTTCCGCC
TTTACTTTCACTTTCGCTTTCGTGTTACGCGATTCCAATTGGACGAATAC
TGCTCGCTAACAAATTCTGATTGGCTGTAAGAAAGTGGTCAGAAAGTATC
TACTAGGGGGGAGTGGAGGATATTTTGAAAAATCCCAAATTACTTTCGCA
CCCCCTCCCCTAGCCTGGAAAAAAATTTCGAACCCCTCCTCATAAGGCCC
AATATTTTTTCGCACCCCCCACTAGAAATTTTTTTACGCAAAAAAACAAT
TCATACAGATGCGGTGCAAAGAGTATTATTTGTTTGTATGACAGTTTTTT
ATGTCAAAATTAGGTAAGGGAGATAGTTTAGCCCTGTAAAGTTGAGTATA
GTCCTTTAGGAGATCTACCATTTTGATTGACATTTACACCACTGGATTTT
TTCAGTCGATTTCCATGGTTACGACGGAATTTCTCTGAAGTAAACAAAAG
AAAAAAACCCGTGGTGTAAACGTCAATCAAAATGGTAGATCTCCTATAGG
AATAGTCCAGGGTTAAAATAAGAATCAACGAGTTGAATTTTCTCTGAGTT
TCCCAAAGTTTTGGGAGAAAATTACAGCTTATTTTCCCTGATACATAATC
TCCCTACATTACAGAGGCATTACTCAATTACTCAAAATATCCTGAGGGGC
CACCAAAAGAAAATTTTGAAGATCAGGTACTCGAGACCCTAAAATACAAG
CTATTCTGTTGTTAAAAGGAGTCTGAAAAATAAAATTCTCTGAGTTTGAA
ATTTCCCTATAAACCTATATTTTCAGGTCTTTCAGGGTCTGTCAAAGCTC
TGTGTATATAATTTATAAGATATTAGTAGAGACTAAGGAGGCACAACCAT
GGTTTGCGCCGACGGGAGAAAATGTTGATGTTTTTCACCACCATTTTAGC
TAAAAGACACTTTGTTTTGACAAATTTCTTTCTAAAAAGTACTTTTTCAA
ACCACTCTGATGAGCTGTGAAAGCCACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAATTTTGGAACCCCCCCTAGAATCCTCCACCCCCCC
CCTAGTAGATACTTTCTGACCACTCCCTAAGTCTTTAGCTTCAGGATTCT
GATTGGATCATTTCCTGCGTCACGGTTGAGTTTTGATTGGTTGAAAGTTT
CTGAGCGTGAATTCTGATTGGATGAATACCTGAAAAGTAAACAATAGAAT
GTAAGTATTTTGCTTATCAAAACCTAAAGATTTCCAGGGGGTTTTATTTA
CTTTGCAAGACAATAATTAAGCCTACAAAACACCAAGAAAAAAACCCAAC
ATAGAACAGGTTTATTTTGTCATGTAGAATATGATAGTGTGAATCTTTTT
GAAATTCTATGTTAGGATTTTTTCTCAATGCCCCGTAACTATGCCCGGGG
TACCCGTTGCTAAGACCTTATGTTAAAAACGAAAGCGATTACGGCAAAAA
GTAGCGATTTTCGTAATACCTCAAATATTGATACTTGACTGTACTGCCTA
ACAAAAGTGATAATTTCTGCTGATGTGGATTTTCTTTTGATTTAGGGTTT
CTCTTTTCAGAAAAACTTATTCTTTACTCATAACGTTTTGCTCCTCCATT
TCCAGAGGTCCCTTGAAAATGGGTCCTACCACCTTTTTTTGACTTATTTC
AACCTTCCCCGAGCTAAACAATGCAATATCTTCTTTAAAAAAAACAGACA
TTGACATTTTTAGTCAAATTTTCAACACTAAAATTTTAATTATGTTCACA
ACCACTTACTGTGAAGTCAGGTAACTTGCATCAGTGGAGGCTAACATGCA
TAGCCCTCAAATGAATGACCTGTCTGGTCATTAAAATACAAAGTTAAATC
AAAACAAAAATTGTAGATTAGAGCTGCGAGTGGAGCTACGTGGTTAATTT
GTTTTGAAATTTTGCTGCTTTTACAATTTCTGAGGGAGGCATTGCAGGTT
TCCGGGGAGTTGTTGAAGATTTTCAGAGAATTCTTTAAGGTGTTCACTCT
CCCAAAAGACTAACAATATTTAGTTTTCCAGCCTCTTTCCCCAAGGTTTC
ACTTTCTAGGGTTGCTTCAAAAAACTTTCAACTTAGTATCTTGTGAAAAT
TTTTACACTGATTTTTTTCTCAAAAGTTTGATAGAGCTTGACTTGGTAGG
ATAATTATTTTCCAGGTGGGAATGCTGGAAATCACTTTTTTCCAATTTTC
TTGAGCTTTTAAATTTTCTCATTCTTTCTCCTATTTTTTATACAACAACC
CCCATATTGTTAATGCACAAAATTTAGCATAATAAAAATTGATATACAGG
TATCATGTATTTAGATCCTGACTTTCAGAAGCAGCCGACGAGCCTGTTTC
CCCAAAGTATCTGTTTCCCCAAAATATCTGTTTCCCTTTTCCAGGAGATA
GCTTTTAGTTGAAAAATTTGGAAGCATCAGAATTTCTAGGAAGAACGTTT
TCCTTACAATCATCTGTTTGCATTACATTGCATTGGAAACAAATGGAATT
TTCTAAGGGAAAACAGATATCAATCACAAACAAGTGTGAGAAAAAGATAA
AAAATTCTAGGAGAGGGAAACAGATGTCCAATACACCTGTTTTAGTAAAG
CACATTCGATATTGGGAAAGTTGTATTCCTTAAAAGCCTGGGAAAACAGA
TCAAAACTTTAATTTTTTAATTGTGGAGACAGATCAAATTTCTAGGGAAG
ACAGTTTGAGATTTTTGAAGAATACAAATTCTAAGAATAACATGGTATCA
GCTCCCCCTTTTTTGGGGGGTAGGGGCTAAGAAATATTTTATCCTTTCCC
TTAAAGAAACCGGGGCTAAGATTGGGGAACCTGGATTTTTTTGTGGGACC
TAGATTTTTTGGGGGGCCTAGATCTTACTATTAAATGAAATATAAAAAGC
AAAAGATGTGTAAACATTAAATATTTTAATACACATAAAGTTTAGTTTTC
ATTTGTCAGTACTGTACTTGCATATATTTTTTATTGACTTTTCTCTACGG
GGGAGCAAGGCAATTTTCTGGGGGAGTTAGAAACCTGGCTGGAGCTATGA
ATAAGATTTTTTAAACTTTTGGCCAAAAGATTGACTTTTCTAGCAGGGAA
GCTATATCTGGGAAACAGATATTAAAAAAATGTCCTCGCTGGATGCTGCA
GCTTCTTATGAATCCAGAACGTCGCGAGCACATTTCAACATGGAAATTTT
TTAATTCTTCTGATTGTTATTTTTTTCGCTTTTAGGATATCAGCATTGAA
CAGATGGGCCGATATATCAGTCCAGTGAACCCAAACATTTATCCTCACCT
TACACTCATCTTATTGGGCATTGGAATTTTCTTTACTGCTTGGTTTTTTG
TGTATCCTTTTCAAATAAGTTTTCCTGATTTTTCTAGCCATAGTAATCCA
TAGTAAAGTTATGGAAATCTAAGCCACAACTTACCATGCATACTTTCTCC
TGCAATTTTTTAAACATTTTGATGAATGACTTCTTGTTTTTTCCTTAACT
ATGGTTATAATTTTTAAACACTAACAGTTATGAAGTTACTTCCACAAAAT
ATTCACGAGATATCTACAAAGAATTATTGGTTGCATTATTCGCTGCTATT
TTCATGGGATTCGGATCGATGTTTTTACTACTCTGGGTTGGAATATATGT
ATGACGTTTCCGTCCGTTTAACAAGACCAACGTGATGCACGCATGTCAAT
TTATAGGGACTATAAAGAATTTGTAGATTTTTTGTTATCGCTTTTTGAAT
ATAATTATGAATACCAATTTTCCATAAAGATTGAATTCAATTTTTTAATC
ATTACCCTTTTCTCAAAAATAGATTTCATAAAAAACAATTATAACCTGTT
CCCAAAAATGACTAATGCCGTTCCAAGCCGTGTGTCAAGTTAGAAAACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051864TCONS_00051864Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:163466..171715 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
505.22	506.37	403.22	375.52	137.3	109.39	309.14	321.85	322.86	306.97	288.59	395.22	243.76	257.31	273.95	273.54	247.79	230.53	149.01	162	224.54	217.29	328.81	311.11	173.92	185.59	209.54	217.34	368.85	311.23