XLOC_032909 (gene) - C. hemisphaerica

Overview
NameXLOC_032909
Unique NameXLOC_032909
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_208:321294..326364+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032909 ID=XLOC_032909|Name=XLOC_032909|organism=Clytia hemisphaerica|type=gene|length=5071bp|location=Sequence derived from alignment at scaffold_208:321294..326364+ (Clytia hemisphaerica)
ATAAATTATCAATACAATTGAACAATTAAATGTAAACAATGATTTTAAAT GTTTGAGTTTGATTATCAAATGCTCGAAttcgaatgttcgaatgttcgaa tttgaatgtttgaatgtttacattgactcgGTAAACCTTCATTTTACTTT AGTGGGATCTGGTAGGATTTCAATAcattccaagaagtttggaagaatga tcttgggcaaacttggcttgatcaatttataatagaataactttacattt ctattttagcagataatttctgaGCCTATTTGTTTCCATACTGTTATATT ACTGAATTAATGCTAAATAGTCACAAtagatctttatttttcagctgttt CAGTCTGATTAGCTTTATATCTGTTTTAGATATCAAAGGTTTGAAAAGTT TCCTTGTTTCTTTCagtgaaaaaaatatgaattaaaaaGATCAGTGTTCC TTTTGTAGCAAAGACTTTTCAGAGCTTAACAAACACAATAAGGAGAAGCA TATTGAAGCTTGTAGAAAGAAGAATGGCAAGAGGAAATCTACATCGACGA TAACAGCATactatcagaaaaaaacaaatactTCTCAGACCTCCTCCTCT GAATCAAACTTAACAGAATCACTATCAGTAAGAGAAGAAAACAATTCAGA CAGGAACAGGCTTGACAATGATGTAGAAATTGTAGAAGAAGTACAGGTTC GAAAAACATGAGAATTGGTGTTGAACTGAAATACTGTTCTGGATTTTCCC CAAATCCCCCGATTAACATACTTCAAGACTTTCCCTACCAAATACTGGAC AGTCAGCCTTTtgtgatttcaaaacaaaaatttcataccAAACAATGTAG TCTGAAAGACTTTGTGATGGACATCAATGTTGATGGAGAAATAAACAAAG ACTGTTCTCTGTTAGGAAAAGACTCATCTCTAAAAAGAATCCTAGCACGT TCTCAAAACGATGATCCTTCAACCCATATTCCAAATGAATGTTTGACATT CAATCAATTGAAAAACAAGTTCGAGAAAAATCAGAAGTAAGACTCTCTCC TTTCTATTGAGAATTACAAACTTAACAACAAGGTGGAGCAACTTGGTAAA ACGCTTTCTTTTTACAAACGCTTTGTTATCTATATTGCTGAAAATAAAGT TCCACGACTGCACTTTCTTGTCAATGTTGCCCTAAATAACAATCAGAGTA TCCAATATATTCTTGGCAAGTGCACAGATGCTGTGGCAGGTGTTTATAAA GCCAGGATGATAAAGACCTGGCGTTTTTGGTTTTAAAGTTTGGAGGCCCA TTACTACTGGATATTTTGTACAGGGCAAATGTCCTCCCAAGTACATCCCT TGCTAACAGAATGAGTAAAAAAGGTATTTCATTTAtcattatttcaaaac aaacacaagAAATACTTTTAAATGCGTTATATTGTATTGAACTCAGTTGA ACAATGCTCTTTTATTACtgtattgttttttattataaacatcTACCATC TACCTGTATCTACTCTCGATAAcagtttgttgtttttttatacctttttt tattttaaggagCACATTTGAAATTATTCCGGGATATGTCATACAAAGat tctttcaatgaaaatttcaacATGAAGTTTGAAGGAGATGAAAGTTCAAA ATTTGGTTTGTCTATCAAATCAGATGAGACATTTATCAATCCTCGGTTTC GATACGATTCAAAAGCCAATAAGATTGTTGGTACCTGCTACGAACACCAT GGCAATGTAAGCCTAGATTTTAACACAATGGAAGATGCTGAAATCCTACA AGAAAAACTTTCAGCAGGGGGGATCCATATTCCCAAAGAATGTCTGGTTA CTGGTAAGTGAAGTTTGTAGCTATATGATATTTAGGTCATTTCCACTGTC AGTCACTGCTTCATTCCCTGCAATTTTGAGGCTGATCCAACAATACATAA CTGACTTAATTTTCTGATGACATAGACGAATTGGAACAGTCAACAACATC AGCCAGagcatcaaaaacaaaatagatgCAAACCCTTTGAATTTTAACAC TGACGGTGATTCAACTCGAAGACAGGCCATGCACGCTATCACTCAAAATG AACTGGATTCTAACTCAGATCTTGGGAAGAAAATCCTGCCCTTCCAttga ttgaaacaaatattggtAACAACCTCGAAACAGTTAAATACGATGCCAAG CATTTGTCCAAAAGATGCTGGACTTCATTAATAAGTGGCAAGCTAGAGGT TGCTAATATTCAAGTAACTAAACAGGACGTGGGAGACATAATGAAGCTTG CAGATATTCGTACACATGAAGTGGAATCACTTGTTTATCCAAGGGGATAA ACAGAATGTGCCTTTAGCTTCATTGAAGTAATCAAAGACGCCAAAAAGGG AGCAGATACCTTTCAAATTGactttgataaaaaatgttcttgTCTTGGTT GCCGCAGTTTATGAAGCTATCATTTGTTTGTATTCATATTCATATGCAGA GCATTCACTCACAAATCAGGTTTGGTAGTCGTATCATCCATTTTCTCAGT AGGGGgtagcaaattttcaaaagcatgtttattctttccttgtttgattt tgatatttgcatttttcattttgaaaggCGGACCTCATTAATGATTTTCA TATAGTTGTTTCTTTCAGGAAGGCAGGGTAGGGACGTCCAAAATTTGTGT ATGAGCAGGTATGAGAGCAGAtgatttttagtaaaaattaatTATCCATT AACAAAAGATAGTCACTTTGGCATTATTAATATAATCTGCTCTTGTAACA AATTTTCTAACATCCCAATACTTACTAAGGAAATTAATATCTTcttgttt tgctttgttttacTTCAGGTCCAATTCATTGCAACAGGAGCTTCCTCCCT TCTCGCTCTGAATAGGGAAGATGCATTTAAGATCCCAAACCAACTCTACC ACGATCTTCAAAGCACATTTATAGATACTATTTTTTGTATTGCTAAACTA CAAATTCATGCACCGACGCAATCTTTCTACACAGTATTAAATGGAACAGA TCCTGCGGAGAGATTTTTCGGTAACTGTCGAATGTCATTCGGCCACAAAA ACTTGGATGCATTCGAGCTCATAAACTTAACTTCTTCAATATCATTATGC GACGAGATTTTATCAAATCATCCCAAATGGGTTCATAAAGGTCGATTGTC TCGCCGGCTTGTATTGGACCACTCAAGTTGCAAAGACTGGTCTGGCAATC TTGTCGTTTCTAGTGTCAATCTGACAACATCATAGAAGTTTGGACTTCTA CAAGGTCAAGCTTTAGCAGTCAAAGCTGAATTTGAATTCAATCCTGTTGA TCTTAGTCTTGAAGGTGTCACTCTAAAGCGCCCTTTCTTTAGAGTTATTG GTGTCAGTGAAAGGGAGGAAGACTGGTCAGTGATGGAAGAAGAAGTATCA ACATCAGATTGCGAGTTAGTTCAAGAGAATGAGGAAGTAGACGGAGTAGA GCTTTTTGATGTCATTGACAGTGACAGAAATGTTTTGTCATATTTTGAAG TTGGTGGAAAGAATGTCTATAAAGCAACAGTCcttaaacaaatttcaaaa gaaaagccCCTATCTGCAGATCGATTGAGAAAGGTGAGAGGATTGAGCAA GTTTACCAGTGATTCTCAGGAAAAGGTTAGTCTGAATGACACAATATCTG TAGGGGATCCTATCATTGCCGAGGTGGaaaaaagcaaatgaaaatttctg ttGTTGTTGGTATCAAAGATGGAGATCATGCTAAAACTTTGATTTCGTGT AAGGACCTGGATAACATTTCTGTTCAAGTACAGGTTAGAGAATTAGAGAT TACAGAGGTTGATGGAAGACTTTATTCTACCGGAAAGTGTGTTTCAGATC CATTATTGGTTAAAGGAAAAATTGCATGACCATCAAACCATAGATCTTAT TGAATCCCCCCCAAAGGCTGCTCCATTTACAATTTTGATAAACAACTAAT CCAAGACATTAGTGTCCATTTGACTTTAAGCCCAAACCAACCAGAAAACG CTCCATCATCTTCTGCTTCTGCTGAAGTCGACGCCACATCAAAGAAAGTT AAGTGCAAGATTTGCACAAAAATCGTAGAGCATAAAGAAATGAGAATTCA TATCGGAAAACATATCATTCATAAGGAAATAATAATAACACAATCATTAT GTGGGTTTTGTGGGAAAGAAGGGTCCAAGCCTCACTTGGTATCATCTTCA AAGAGTGGTAACAATGTATATCACAGTCCTCAATNGAAAGAAGGGTGCAA GCCTTCCTTGGTATCATCTTCAAAGAGTGGTAACAATGTATATTACAGTC CTCAATCTAATTGTCTTTACTTTTACAAGTATAAAAGAGTTGGCAATAAG TCTACCAAAACAACTCCATGTACAAATCGTATCATCACTTGCCCCTCGTG CAACATGTACACTTGGTCGTACAACTTAAAACTCCACATGACAGAAAACC ACCCTAATGAGGATCAGATTGAAGTTATCTCAGATAAAGagaaagatatt ttgaaaaagcgCAAGTGTTAAATTGTTCTAAGAAACTTTGAGATAAGTtg agatttgtttttatttctatttttatctaaATTCactgttttaaaaatta cttCTAAACTTGCAGTACATTGAGTTTGATtgaatttgtttatatttttt atgatttgattGAAGAAACCTAGAAAAACGAGACAAGTTTCTTCTTCTTA AGCCTATTTGAAAGTTCCCTAAATTCCTCTAATTTTAGTCTGTGAGGGCA AAGTTTTGCATGCACTAAATCAAGTTGATCATTTTGTAATTTATTATGCG GtttttgattattatttttCCAATCAGTTACAATACATGTATACTTCATT ATAAGTTTTCTCAGGTTTTTGTCATTGAGAAGAAATCCCTATGGCAAAAC AGGAAGGTTTTATTTGTAAGCCACAACTTGATAAAGAGTCTGTGAGAGTT GATAACATATTAAATCTAGACACCTTTTCTTCAGGGTATCAAAGAAAATC AAGTGTTTGCTTAGGTTTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051986TCONS_00051986Clytia hemisphaericatranscript
TCONS_00051987TCONS_00051987Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051987-proteinTCONS_00051987-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_208supercontigscaffold_208:321294..326364 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39 0.47 0.22 0.11 1.11 0.75 1.65 1.76 0.68 1.65 1.05 1.55 1.17 1.98 1.26 2.15 1.7 2.03 1.25 2.41 2.45 1.25 0.65 1 0 0.05 0.73 0.74 0.49 0.54