XLOC_033121 (gene) - C. hemisphaerica

Overview
NameXLOC_033121
Unique NameXLOC_033121
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_213:1207954..1211598-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033121 ID=XLOC_033121|Name=XLOC_033121|organism=Clytia hemisphaerica|type=gene|length=3645bp|location=Sequence derived from alignment at scaffold_213:1207954..1211598- (Clytia hemisphaerica)
AAGATAAACGCCCAAATAACGCCCATGAAAAGAAGCAAATGCATTGCGCG
CGCGAATGTTTTCGTTCGATTTCTTTTCATTCTTCACAACAAAGTTTGTT
TACATTTGTGAGAATTTTCAATAAGCGTTTTTCATTTCGATTCCAAGTTT
CTACATTTTATTCTACTTATATTATACTACAATATTCAATGGGGAAAGTT
CAATCAAAGACTGAGCCTCTCAATACCGATAAACGAAGTTCCGTTAGTTC
CCAAAAAGACGCAGATGATGGATCGAACGGTCCTAACGAAGATGGCAAAG
AAGGTGAAGATTCTAGCACCAACCGAAAAGATTTAATAATCGCCTTCAAT
GAAGATTTCACACAAATTGATGTCAACAAAGAGAAGAGAGGAGGGTCGAC
TCGTCGCATGAGTCGAATGGAAAAATTGAAAAGTCGAAAATTACCTCATG
TTATGAGAATTCAAATTATTGAAGAAGGAGATGAAGCTGAAGGTAATCAA
ATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTCGGCGTTCGATTCG
TTCGATTGACATCGTCTGGTTGAAAGGAAGGGGTCATGGCCTAAAACTGA
CAGACACAAAAAAAGGCATTCAAAAAGAGAAAGAGAGAGATATGATATAT
CTAGAATAATAAGAAAAATACTCACAAAATCAGGGAGAAAGAATAAAGGA
ACTTAAATTCTGGCTTAGATTACCCAAAAAAATCCAAGAAGACTTGTGAA
AGCACTTTCGCTTTGACCCGAACAACCAAATTATTTACCTTGATCACGCC
TTGTAACCAAATCACGAAATAAGGGCGTAAGATAAACGCCCAAATAACGC
CCATGAAAAGAAGCAAATGCATTGCGCGCGCGAATGTTTTCGTTCGATTT
CTTTTCATTCTTCACAACAAAGTTTGTTTACATTTGTGAGAATTTTCAAT
AAGCGTTTTTCATTTCGATTCCAAGTTTCTACATTTTATTCTACTTATAT
TATACTACAATATTCAATGGGGAAAGTTCAATCAAAGACTGAGCCTCTCA
ATACCGATAAACGAAGTTCCGTTAGTTCCCAAAAAGACGCAGATGATGGA
TCGAACGGTCCTAACGAAGATGGCAAAGAAGGTGAAGATTCTAACACCAA
CCGAAAAGATTTAATAATCGCCTTCAATGAAGATTTCACACAAATTGATG
TCAACAAAGAGAAGAGAGGAGGGTCGACTCGTCGCATGAGTCGAATGGAA
AAATTGAAAAGTCGAAAATTACCTCATGTTATGAGAATTCAAATTATTGA
AGAAGGAGATGAAGCTGAAGGTAATCAAATTCAACCATCTGCTTTGATAT
TTTTTTAGCGTTTGCTAGCGCCTGGGGGGGGCACTCATATGATTTGGCCT
AAGTCATGTGCAGCGCTTAAGGGTTTTTCAGCATCCCAAAATGCACTGTA
AGGATTTCTGTGAGATTGCCATTGCACTGCAAGGGTCGAATTTTAAAAGC
AGATTTTGCGCAGCACATACCGTCGTTTCGAAATCGTTTGCCCCCCCGGA
CTGGCGTTGTCTGTACCCGATATCTACGATACGGCTAATTTCAAAATTCA
TTACAGTATCGTAGAGGGTCTGTGTGTAAAAATTGTATCCGGGCCCGGTT
GTCTGGGGCTACACTGTGACAATTATGACAAATTTGGGGTCTTGCGGTGT
CCTTAGACAACCTCGGTCCATGCATAGTCTCTTCTTATATTAATGAGGAG
ATTAGCCCCCCGGGGATACTAGGTTTGCGAGATGATGGAGTGGTGCCGCC
CGATTTTTGAAAATCGGAAATTTTAGGGTCTTAAAATCGAAGAAAAAATA
ACGAAATTTTGTAGATTTTAGGACTCTTACCGAAATTTGGCCTTTTTCGG
GGTAAATATTAGTAGTTTCACTTCTTTTGTGACCCTTCTGGGGCGACTGA
AATTAGAAATTGTGATTTTTGCGACCCTTAGCGGGACTGTGAAGGTCCAA
AAAAGGGACCCTTAAGGGATGCACATATACGTACCCTCCACTTGGCCTAA
GTACCCCCCCCCCCCAGGGATTAGCCCGGGCTTGTGGGGAAAAAAAAAAA
AAAAAAGAAACCCCCCCCCCCCCATGGATTAGCCCTGGACGTTGGGGAAA
AAAGATAACTATAAGTCATCCCTCCTCGTAGAAAGATAATTTTGAGTCAT
CGCAGCCACCGTCGCTTAAAAATCGACAAACAAAGTCAACCCCACTAACA
CCACTTTTTCATGTTACTGAGAGGTAATAAGGTACCAGCTTCATTGAGTT
TGAATATTTAACCTTTCTAAAGCAAGAAAAAGTGAAACCTTAAATTTGCC
CCGGACACACGAGTCACTTGTTTTGGATGGAAGTCCAGGAGTTTGGATCT
AGCTCCTTCGGGACTTTGAAATCAAAGATATGTTCGAGTAATGACAATGT
CATGTCAGCCTACCACTTACTTTTTTTTCAAATTCTACCTCCACTTATTT
AAATTTTCTAGACAATTGTTCGGTCCATAAATCAAGCGATCATCATATGA
CTCATTTGGAGAAAATCAAACGACGAAAAATGCCGGCTGGTAAACGTATC
TTTGGAGACCATTATGTCGAATAGAAAGTCGATTATTTTTCAAAAGTAGG
ATAGAGTTTTGTACTTTTCTACTCTATTTTTTCTTCCAAGCTCAATCTAA
TTGATAGCTCACTAGTCCATTATAGATACGCGACCTTATACAGTAATCTA
AAAAAGTCTCGAAGAAGAGCTCCAGTGCTTTTAGGTGCCTAAAACTTTAA
TTCTTTGCCTTAATATCTTCAGAATGACGAAAAAAGTATCTATAACATAA
AATTGAGACAATTGAGGGAACTTATTTTGGCGAGAACCAATTTTGGTGAG
CAGAAGAAATCTTGAAAATTTTTGTATTGGTGAGAACTTATTTTGGCGAA
TTACAGGCTAAATCTGTCCAATTTTGCCTTATTTTGAGCAATTTTTGATG
AGTTTCAGAGGTTATTTTTACCAAAAGAATTTTTTTGACGAGTAAGTAAA
TTATTTAATTTTGACGAGAACCGACGAATTTTGTCGAAACTCGCCAAAAT
TAGTTCTCGCCAAAATTAGTTCCCTGGTGCTAGAAAAAGAAATCGAAAGC
CTGTAAATAGTTTAATTTTCCAATGTTTGAATATTTGTTTAGATAAACGA
TAATCCACTTCAAATGATTTGACTGTTCTTTTTCTCTCTATTCAACCCAG
CCTAAAAGCTACATTAACCAATCGATCCAAATTTTTTACTCTCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052392TCONS_00052392Clytia hemisphaericatranscript
TCONS_00052391TCONS_00052391Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052392-proteinTCONS_00052392-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:1207954..1211598 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
56.24	55.51	59.67	61.64	60.28	52.38	67.17	72.07	55.8	49.41	36.05	52.84	22.83	19.37	25.22	24.83	41.87	45.22	16.34	18.26	34.83	33.25	39.49	35.21	176.78	112.84	32.89	25.76	25.07	22.34