XLOC_033197 (gene) - C. hemisphaerica

Overview
NameXLOC_033197
Unique NameXLOC_033197
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_216:30748..36158+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033197 ID=XLOC_033197|Name=XLOC_033197|organism=Clytia hemisphaerica|type=gene|length=5411bp|location=Sequence derived from alignment at scaffold_216:30748..36158+ (Clytia hemisphaerica)
ATACACACAAACACAACACAAATATTCACAACAAATTTCTTCACACATAC AACAACACAACTACAACAAAAATGGATTGCGTTGATTTGGAAACAAGACT TAAAGAATTCGATCAAGAACATTTGATGAGATTTTACAACACTCTGGATG ATGACCAACAAATCAAGTTGACCAATGAATTGAAAGGAGTTGATTATAAA TTGATCACCAAATTGTACGGAAGAGCTAAAGTCGACTTGGAAAAGACTGA CGTAAGTTACACTCTTTTgctttataagcatacgggaagTTTGGGCTAAG GCTCTGATTAAGCttagcaaaattttgttttcacaTCAGCCTCAAATTAT GCTTTATGTCAAATGtaggttttataaaaaaaatcgtcaatttctttttc tcaaTTCTGGTCATCAACAGcacgattcgaatgttttgaaattccgTTAA TAAGTTCGACAAGAACATGGTCGACTAGTCGAATTTAAAACTGGGCACAC TTCCACGGGAAATTTGTGAGCAGTTAGTCAGAGTTAGCCTATCTAGTGAG TGAAGGGATATGACATTTGTATATATGCAAGCCAGTGAACAAACAGTAAA TTTATATCTCATCCATATTCAACAGGTCAAGAAAGACGACTTGATGGAAC TGATTTCACCAGAATTGAGAGTGGAAAAATCTACCTCACCGAAAGAGATA GTCCAAGAATGGGAGAACAGAGGTCTACAAGAGATGGGAGATAACACCGT TGGTGTCATTCTATTGGCTGGTGGACAAGGAACGCGACTTGGTGAGtttt ttccttgggaaatatttttggcCACTTTATGTTTATGGGAGATACAGTCA GCTTTATTCGTGAAGTTAAGTAAATCGTTATTTTCGCTAAcatattacat ttttcgtccgtcgtcgtgattatcctggtacaCTTAACATCAGTATTATT ATCTATTAAAATAATTCTGTAATTCTAACTTAAATATTGAACTGTATCCT AAAAGGTGATCTTTGTAATTCTCAAGTCTctggtgattaaaaaaaaactc ttaacCCAAAAATATAGGTTTTACACATATCTGTTAATAAGTTGGTCTTC ATGTCAAGCAATGTCTAATCTAGACAAAGTCtctttgttttcaatattta tcAAATAATTAACTTGCATCCCCTTTCCTGTTATAGGCTTCAATCATCCC AAAGGCATGTACAATGTTGGTCTCCCCTCCAACAAGACATTATACCAACT CCAAGCAGAACGAATTTTCAAACTACAAAAATTAGCTGAAGCAAAAACTG GAAACAAATCTGTTATCAGATGGTACACCATTTTCTTTCAAACTACTtcc tttttttatgatttaatCAAAATGTGCTAAATTTGCAGGTGAATGTCGAA TGAATGGTCTATCTTTCATAAGAAGACAgtttcctaaatttcttggtaCT AGTTATagaacttttttaaataaactGATTCTAAAAACCATAAATCATCA ATGCTCAAAGTTCATCCATAACATTAGACTTTTGCCTTACGAGTGCCTCA GGAAAAATCAATAAAGCCCACGGGTTTTTACAATGGCTTGTCCAGTTTAA AAAGCGATCTATGATAACGATATTAACAATTTAAATGGTCCTTATTCCAG GTACATTATGACCAGTGAATCAACCCTCAAGGACACAAAAGATTATTTCG AGAGCAACTCATTCTTTGGTTTGGAGCCATCGGCTGTTGTTTTCTTTGAG CAACATCAACTACCATGTTTAACATTCGAAGGAAAATTAATCCTGAAAAC ACCAGGTATTTTATCTTGCTTCTGTAGAACCATGACCGTTATTTTAGGCA CTGACAAATAAAAAGACGCAAtcgttaaagggttaaaatcACATTCTAGT GAGACACTGTTTTTGCCCCTTTAAAGTACCTAAGTATAGCATATATTAGT TGAATATTCCTGCATTTCTAAGTTGATAAGCGATTCGTATTGGCTAAAGT TGTCTACAATCTATATAAGTGATAATAATAAGAATTCTACAATGATAAAA ACTCCACGTTagttatttttactttagtttaTTTAAATTTGATTAATTTC AGGATCTTTGGCTAAGGCACCAGACGGTAATGGTGGATTATACACCGCCC TTCGAAGCGCCAAAGTTGTCGACGATATGGAACAAAATGGTGTAAAACAC GTTTTTGTTTACTGTGTTGATAATATTCTTGTTAAAATTGCTGACCCATC ATTTATTGGTTATTGCGCAATGAAAGATTTAGATGCTTCGAATAAGGTAT GGGAAAATAACTTTCTGATTTTGTGAGTTCTAAAAGAGCATTCCGTGTTG GGATTTGATTAAATATTTTCGTTAAGAAGTGATTGGTTTTAAtcttaaat ttaaaataatctttttcttccatttcttctTTCAGGtgattgaaaagaaa gaacCAAACGAGTCAGTCGGTGTGGTGTGTAAATGTGAAGGAAAATTCCA AGTTGTTGAATACAGCGAAATCTCACAAACGACAGCCGAGAAAAGAAGTG AAGATGGTCGATTATTGTTCAACGATTCCAACATTTGCATGCATTACTTT AACACGCGATTCTTAAGACAGATTATCACGTATGTTGTTTTATGCTTCTC gaactcgaacttctataattcgaattatcTGAAATCTGTACATTCACCAT ATCTGAGCTCTGCTTTCACACCCTGAAAAGAAGTCTTTTGGTTCCATTAG TATTTGAATTCCACTGTACTGCAcctcttgtatttttcaaaatgttattT CTGTTCAGCACAATGAGGTCTGGGGATGGGGAATAAGTTAGCAAGGAAAA GTGTCTTCTATATAATCATGTATCTTGTTTCCAGTCCCTGATTGagaatt cttcaaaaataaaaagtttttaaaatttaaacttaGCCCGGGAAATAGGC TAGGAATCGGTGAAATTGCCATAAAGTCATTTTAAATAAACACACAAATG TATAAAAACCGAAAAATAGGGAGGTTTTTTTTTTACCCAACCGTTAGAAT AAAAACCCTATTTAACTGACAATATGGGCAATTTATCTTGGCAAATTTTC TGAATATTTTATCATTCATTTTCTTTCCACAGGGAACACTTAGAGGAGAT GCCACATCACATTGCCAAGAAGAAGATTCCATACGTCGATGATAAAGGAG TGGAAATTAAACCCACCAAACCAAATGGaatgaaattagaaaaattcGTT TTCGATGTCTTCCAATACACGAGGTACTTATGCTTTGATTGGTGCTTTTA AGCATGTTTCCCATAATTTTGGTTGAGTGGTTGGGTGATTGAGCTTGTGT CTCTAGCATAAACCGACCCTTTGCTACCAATAAATATCCTGgcaaattag tttgtttttctttcgaGTCACGCTGTCTTCAGGGGAAAAGGACAATCATT CAAGTAATAGGCTATTCCAGAAAGATTTTGTACCCCCTATGCTGAGgaga tcttttttttaaaatgtgaccccctagattttcttttcaatttttcagga cccctatggatttttttctcccatttttttgactaccctggatttttgac cttgTTATATTGACCACCCTGAATTTTCAACCCAATTTTTACTGACCATC CTGGATCTTATCCTTCAAAAACCAGaccagattttttattttccagacca ccctggacatCACACCTTCTCAACACAGGGTTACAGACAATTTGTGGAAT AACCCAATGTACAACTTTGATTTATTTAAATAAACGTTTCTTTATCTATT TTTTTAACAGTAATTTCGGTATCTTCGTTTGTGAACGTGACGAAGAATTT TCACCCTTAAAGAATGGCCCTGATACGNATCTTCGTTTGTGAACGTGACG AAGAATTTTCACCCTTGAAGAATGGCCCTGATACACCGAAATGTTCGGCC ATTTCGTGCCGACAAGACATTTCCAACTTGTGTAAAAAATATCTTCGAAA CGCTGGAGCAGAATTCGTTGATGACGATGGCAAAACCGTTGAAAATTGGT AAGTTTTTACTCTCATGGTTTAACTTACTAAAGATAAATAGCGTGTGTTT GGCAAAGAAAATCGTCTAGTGAGTTCAACCATATGGCTTATTTTTCACTC ATAATAAtcaaatcttattggttgaaaggAACATCATATGACTTTCTGTA TCGAAGAAAGGGTAGTGTTTTCCATTATATAACATTAATTCTAATTTACT TTTTCTCTTTACAGCACGAATTTATGTGAGATTTCACCTTTACTTTCCTT CGCTGGTGAAGTAAGAACAATTTGTTTTTCTCTGTCTCAGTGGCCCAATA TTTTCGAGCGACTTTTACCAAGTACCTAGGTTAgagaaaataccccaaaa ttttcgtGCTCGCTTCACTCTTGTAATAATTACAAAGATATTTACTTTCC ATGGGacgccaaaatcaaaatcttctaaaattgcTTCCTCGGTTTTCCCG AATAttagtcgacccaccacgctactggggtcaatttgttcttttaccAG TTTTATAAGTTTTAAAAGATGATATTCTTTTATCTTTTTAGGGATTGGAA TCATTCAAAGGCCAACAATTTTCATCAACTCAACCTATCCATTTACAACC AGACGATAGTACGAATTCACCGCGatctaaaaaatctaaaaactgaaaat ttaattttgttttaattattTAACTTTCCCAAAatgcaagtttttttttt gtttctaattTGTAACCAACGCATGCGTCTTTCATGAATTTTAAACTATt attataatatatattatatttttcataatgagaataagttataaaaaatt ttgtttggatttatttttctttggaatgttttttttctcaattatttctt attttggtgtgcattgtttcttttgtttttagttAAAACAAAACTTAGTT ATGTTAAATGTAACAGCTTTATTTTAGCAAGTTTGTTTTCGTTCTTTCGT TCAATTTTTTCATACattctttttgatatttttcattttcaacgtgactt tgttttctttttttctcatcaATAATAGTTAAGACAATGGAATAGATTGa aagatttgaaagatttgCAAAGATTTGCACTAATAAGTTTTCAACgcgaa tttttttattcaaaagttatttttcgGACATTTAATGTCCGGTAAAATCT TACAGTAATTAACTTTTCAACCCCAAAAagattgatatatttttttagtt ATTAGTTTACTATTATATTTAATGTACCATATGATAGCATGTAATTGtta tattatgtttttttttgtaataccatgcaaaacattttttgtttgttttt aatttaaaaacatctttaaattatttaaaaagaattttacACTTTCATCA CAAGAAAACCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052500TCONS_00052500Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052500-proteinTCONS_00052500-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_216supercontigscaffold_216:30748..36158 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UAP1PREDICTED: UDP-N-acetylhexosamine pyrophosphorylase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
131.49 132.59 352.33 329.61 57.54 42.61 68.08 66.92 62.88 75.77 55.4 87.49 34.87 33.15 151.15 70.94 42.36 83.48 38.1 48.59 23.63 22.27 35.77 38.01 59.94 62.22 15.7 37.7 45.92 37.39