XLOC_033242 (gene) - C. hemisphaerica

Overview
NameXLOC_033242
Unique NameXLOC_033242
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:208889..212826+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033242 ID=XLOC_033242|Name=XLOC_033242|organism=Clytia hemisphaerica|type=gene|length=3938bp|location=Sequence derived from alignment at scaffold_218:208889..212826+ (Clytia hemisphaerica)
gaaatatttctcTCATTTGATTCTCAGACAATTGAAAGAGAAGACGAAAC
AACTTGGTTTGTTGAAGAAGAATCAAACAGCTGAGCGAGAAAAACAACAT
CAGCTCGTCAACGAgtccaaaaaagttgaacaagAAATACAACAGCTGGA
GGTATAACTTATTTCTTTTAGAGTACTGCGACGTACAGACAACGCAACAC
GTGAGCCTTGTCAAGCTAAACAAAATCCGTTGAGACTCAATTTGTTACGT
TATGCTTTTATGTAATTGAGTTacaaaataaatgtattttttataatttg
agaTCTATTGAAATTTGATCAACTAAGGCTCAACATGAATGTGTtgtatg
cttttttcaacatttgagCCTGGCTATGGTTCTAAGTTTCATGCTTACTG
CTTGCTGTACCCTTACTAGTTACTTCGCTCAACATGAATGTGTtgtatgc
ttttttcaacatttgagCCTGGTTATGGTTCTAAGTTTCATGCTTACTGC
TTGCTGTACCCTTACTAGTTACTTCGCAATACCAGAAATTATGGCTCGTT
TACAGTAGTTTCGATGCAATCATTTTCAAACTGTTGGTACTAAATTGAAA
TTGTCATATTTTTTGAATCACTTGGTTGACTTGTTTAACCATGCAAATTC
ACTTTTGTATAATCTCCAATAGGACGAAAAAGATAAGCGAGACAAACGTA
TCATCATGTTAGAAGATGCATTACGTGAAAGCGTCACTATAGCTGTTGAA
CGTGAAGATCTTCTGGCAAGTCACAAAGAAATGTACGAAAACGCTGTCAA
TAAGATGAACTCAACCAATAGCGAATATGAGAGAGTTGAACTGGAAAAGA
AAATCACAAACATCAAGAATGCGTTTCTTATTTTATCTCTCAGTGAGAAA
GACGCACTGATTGCATCGATGGAAGCGACCAGGAAAAGACAGAACGAAGA
ACTGTTTAATATCAAGTATGTCTATATTATACACCTTTAAGTCTTACGCC
TCTGCCGGTGATCGGGCTCAAGATTACGTGGGTTGAATAATGTCAAATGT
TTTTATcctcaatgcaatgacttcaatcCTTATCTCTAACCCCCTCTCAT
GCAGCTTTTAGAAGCAAGAATTGATTGATGTATTGTATAAATTCCAGTCT
TTGGTTTAAGGAACGACCCTCTACCAAACCGGGGAAATACAAGGTTATGG
TGTGAAGAATTTATGATTAAAAGTTTTAACTGAAATTCAAGCTCGTTCAT
GCATTCAAACTTTCCACCTGTACTTAACTTATTGCCTTTCTTTCAGACAA
GAAACCTTACTAGCATCTATTAGTGAGAAAGACAATCAAATCGCACACTT
GGAATTACAATCGTCAAAAACCAAGAAACAAGATATCAAAcaattgaaac
ttgaaaaagaaaaattcgttGAACAATTAAAAGCACAGGTAAAGCTTTGA
CCACCATTCAAATATTTGAGCAGTACCTTCCTACTATCACCTATCTTCAC
CTAAATCGCACTAATGAGCCTCACGAAGtaacaaaaaacacaaatcatTA
GAGGATACAAGCAGCCTAACAATCATCATTTATTTACCATTACTTTATGG
AATTGATCATCCGAAATTCCTAGGTTTTAACTGAAATATCTAAGTCTTAA
CCTTAGTAAGCTTATAGACATGACCTCTTTTTCCTCTCTTCTACAGAATA
ACAATCGAATGACGATCTTAAGTAACggtgaaaatgagaacaatCTGTTA
ATCAACGAACTTGAAAGTGCTCCGCCAGAACAGGTACAATATCTTGCAAT
TCTTTTGCTGTTCTTTTTTGACTTCTCATATCAACACATTATACTTATGT
TGTTCAATCAAGCTGaatcttttattttaaaagGGTAAAAAACATCTCCC
AGGGTCGGGTTTTTCTTATCAGTGAGTCAAAAAAAGCCAGCAATGCTAGA
AGGTATTTCAGTCGCTCTAAGGGTCatctttttttagcaaaaaatcgtCT
CCCTAAGGAGACCCAGAATCCCCAAAATCTAGTACCCCGGGGTCTAATCT
TTGAACCActcttttttttgtgttttcatGGACTATAAACCGAACTTATC
TTTTGATAACCAACAGTTTCACTTTACGTTCTTCCATCTTCAGGTTTACG
AAGCTATCCGTCATCTCCACAATAGTACAAGTAAACTAGAGTTCTACATT
GAAGAATTTCTATCCTATTCTAATGAACAATACAAAAAGGTTTTAGATGA
CCTGCCAACTATACCGAAAACCAAATGCAAATCCACAGACTCGTTAAAGA
AACTGTCGAAACCAGAGGTACGATTTGATCCGATTTAGTTTTGGTTTTTT
TAAGTGGTGACACCGATGTTTTCACGGAGGCTTTCCTTGGTCTTACCATG
TTTTCTTTCACTCGTCCAATTGAGGGGAGAAAGGTCAGGCATTCGTATTT
TATCTTCAACCATCTGGTTCTGGAAAACAAGcttcaaactttaaaatatg
AAGATTCTTGAATCAAAtcagttttctttttaaagaaaccGTGACATATC
TAGGGGTTCGTTTAGGTGCTGTTAGACTTAAAATATCCATTAAGTTTATT
TATATCTGACCTCTCAGTTTCATACTCACTAATTTCCATTTTCACTTTTA
GTTATTGAAAGAACTGAAAGTCGTGGATGTGGATTGTAACCAATTAAAAG
GTTTCGTTCATTCATTACTTGATAAGCTGGAAGGTGTTGCTTAACATTGG
TTCACAAAAAGTGATTTGATTAGTTGGCGAAAACGAATCTTTCGTTTGGA
GAAATCAAGATATAGAGGGATAGTTAGGCATTCCCTCAAGCTTTTAAAAG
TGGCGTTATGTTCTGATCTAGGCTggcaaaaacatcaaaagaatCTTCAT
ATGAACGTCATTATAATGTTAGATGGTGTTCCAGCTGGATAAAAGGTTGC
TTTGGTTGGTTTCGACCNAAATTTATAATGTTAGATGGTGTTCCAGCTGG
ATTAAAGGTTGCTTTGGTTGGTTTCGACCCCATTGAATATGCAAGTGTCA
CAATTGATAGAAAATGGAAAATCTTCATTTCGTGGATTCGACggatttta
gtttttatcaGTTAGAATTGCAATGACAGAAGAAGTATTCATTTTGGATa
ttcatttttaaaggaaaagtgACATTTTTGACGTTGcgttttgttcaata
tttttcagttttgttgCGTTCACATGtgcagaaaaaaaagaattttatat
TAATGTTTTGTCGTGTTAAAATTGTACAATTTgtataaaaatgatttttt
ctaagttacgaaaataatttttctttactacTCTCCCTTTTAATGAAGAT
TACATTCGTCCATATAAACAATCTATTGtattattcagaaaaaaacacag
cAATGACTTTTATCAACTTCCTTGATAAAAAAACGAGGTTACAGACATTC
ATTCTACAGTGACGAAAGCCCTACCTACATTCcaatttaaaaattattct
ttaCAGTGGGTACGAAAAATGAACGGAAACTTTTTGTTGGTATGAAGTAA
AAATCATAGCACATAATTGTGTAAATTCGTCCTtcttttttccggacaca
ctgTAGTGATCCCGTTACCGGGTTGACTTTTAGTTAGATCCTTCCACAAA
CATTTTATGAAAATGCATTattaatgacaaaaatatttttttcaattttc
atttatttctatttctttgtactttttctttaaatattactttttagaaa
tatttttttcatgcatttttttattatacAAACAAGACTGAAGAAAGATT
AACTACGATGGCCCCGAAGTTTATCCACTTCtaaaaaaagttctgaaatt
ttcaagaagagaagtaaaaatttaaagaagggAAGTAAATATTTCGAGaa
gggaagtaaaaattttaaaaagggaAGTAAAATGTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052563TCONS_00052563Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052563-proteinTCONS_00052563-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:208889..212826 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.44	12.48	10.6	9.72	16.25	11.97	10.4	9.76	5.55	7.27	7.12	6.25	15.57	14.24	12.61	9.92	20.46	18.29	18.24	19.97	24.96	24.51	17.01	20.81	14.56	16.71	38.52	30.45	23.23	29.39