XLOC_033253 (gene) - C. hemisphaerica

Overview
NameXLOC_033253
Unique NameXLOC_033253
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:607998..614299+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033253 ID=XLOC_033253|Name=XLOC_033253|organism=Clytia hemisphaerica|type=gene|length=6302bp|location=Sequence derived from alignment at scaffold_218:607998..614299+ (Clytia hemisphaerica)
aaccaattttaacaaatgacccctcatttttctcacaaaggtaaggactt tcaaataaaattagtttggttttcaaaatttgaggggaaaacTTTGACCT GTCCACCCTACTATAAATCAAACCATAGTCAATAAAAGAAAGCCCAGTCT GGAaaccttttgtttctttccacaGATTCTTATTTGAGCTTGCGTTGATA GATTATttagttttgctttttttttNTCAATAAAAGAAAGCCCAGTCTGG AaaccttttgtttctttccacaGATTCTTATTTGAGCTTGCGTTGATAGA TTATttagttttgctttttttttatcaTGTGATCAAATCATACACCAATC CCACAGGGAGCACTTGGTAATGTTATCAAAACTTTAGCAAatggattttt atcttttggtattaacaaaggaaaaagctaacaaagaGTTAAAAActata agcttccagaccagagGTTTTCAGCAAACTATGATCAAACTCTCGAACAT TCGCAATTGTTTAAAGCAATTTGGAGTTGTCCATTTCAATCAATAAAAAG TTTGCCCAGCCCTTTCATATCCTCACCTCTTCCTTTAAAAACTATAGGTC AAAATTTTCACATTGATGTCACAAATTAATTGTACTCTTTTCTctgctga aaattttcaacttttgcgTGTGTACTGGAGCGCACATCTTGATCGacaat ttttcaatcaatcagAAAGAAGTCCACCTGTTTTTTTACAGAAATCAAAC ATTGaccaggccatattttagaaaggcagggcagcgtccgttggtggcca aaaagggcactctttcttgtgtttttctgctaaaaaaggctgtttttacc aaaatttcagaGATTTCAGGAGGGTCAGcgggcatgaaaaatggtctGTT GACTGTGCGACCAAATCTAGTTTAAGAATTTTGACCTAACATGCACCCTC GTCCAATCAATGGAAAAGAGGTCTTTACTTGCATAAATTGTATTGCAACA CGTCCCTGAAAAATTACCATTTTTACAGTTACCAGACCTCAGGTTTACTT GTACtgtatatctttttatttggaCCAAATGtaacaaaccaataaaattg attttagatcaaaaacaataattttttaatcttttgggtttttttttctc gctaAAATTACTTAATTTGCACATCAATCTTCTAAAGCAATGATTGGAAT TTAAGCTTTTCTTTTTTTCCTTTTATGTGATGTCTACCAACAGATCAAAG ACTCCAGGTTAGTGAACAGTATTTGAGTTTTTTTCATTGAATGGCTTTAT TGATACCTAAAGCCTCCTTAAAACTTGTCAAAATTTGTAGGGGAAGCATC TTAGGGACTCAAGGCCCCCTTAAAATCTCATGATTGACAAGTGTCACCTT GAAATGTTGACCATTGGTTTGGCCTTCTGTCTGGTtggtattttacagac aagCACGTGAACTTGACcaaaatcatgtattgactgattgacttgttcga tttgactgaaatttgtcaaataaaagcGACTAGTNATTATCAGAAAAAGT TGTCCAAATtacatttccagaaaaaaagtcaaattttgccATTTCATCAT ACACCCTAGAATAGAAAAAATTTGATACTATGACTATTTGGTACCTTGCT GACCGGTCTGTAAAGTGCATGTTGGCCACCTGCTAGATTTCAGGAACTAC AGGTGCTTTTGACTTAATTTCCACCAGTTATAGATACCACAAggcagtgt gcaaaatttcaatttagtcaCGTGAGAAGTTTGTTGGTATTTGACAGACC GGTccattttttacctaaaatgttGATGGCGTTTTATAACTTTGATAATG TTTTCAGGTGGTAAGCTTGTATATTTATACACCAAGAAGAAGGGAACAGT ACCAAAATGTGGAGATTTCGGCACCCCATTGAGAGGTGTAAGtaatttat attttctttaactGAGAAAGGGATGGGTGAATAAAGCTTCCAGACTCTAA AATAATGCAATCATGAACAAAATTTATTTCCATTGCTGTTTCTTTTTTAA CCTACCTGGGGGTTCTTAAATTTAGCCATTGTTTGCTcatctgttaccaa cttttccaattatttttatttatttttttcatagtgaTGGAAAATGATAT ATCCCAAAAAGCcagattttcaaaacttttttgggaaatttgggTCAAAA AGTGCTTAAAACTGGGTCTTTTTGattaatttcttattttttgaaccttc ttggaggtcctataaattaatctgtgtttgtctgttaccaacttttctca ggattgaatcaaaggaattttgtgatttttagtacaaaggtgcaaaatgg tgaaTACCAAAATGTGATagagctcgatttttgaaaaaaaatttgggcca atttgggcccaaaaatagtgttttttggaCTGTTGAAAAtctgttcatta gtttttcctaatgtTTTGTACAAATACGTAGAATTACAGTGCGCTAAATA TGAAAAGGCtcatttttggaaaagaaaaatattgggccCCAAAAAAGGGT TTCTTGGACTTGTGAAAAAtctgttcattagtttttcctaattttttgta caaagactTAAATATCTGTTTAAGGGCTTAATTCAAACACCATAACAAAA TCGACCTCCCCAACCTAAAAGATGCTATATCATGATCGGAACGTGTTNCC GCTACTCAATATGAGTGGTAACATCTTTAAAAGGTAAATTTGTTTGAATT GACATCCAGTTGTGCTACTAttaagctaaggctacactgatagttttttc aggcggctgcaatgcaattgttgcattgcagccgcctgaaaGATGTTGCT GTCTAGCCATCTAAAAAAAGGAACcaggaaaaacgtcaaaaaaattgcag attcttctgcaacaaaatcagttACACTTACAATTTGttctgcaatattt ttattgcgtTGCAGAGCAATtgcagaaaaaattgacgtgctacatttttc aatttctcgcGCGCTTGCAACGCAACGCtaattgcattgcagccgcctga aaaaactatcagtgtagccttagctttaTGAGCTTTTTAAAATCTGTGTT TTCTTACTAATATCTAGccattttatttatattcttattacatcaatcat CAGGTTAGGCCATTTAGCATATTGTAGCTTGTTTCTACTGAGGATTGAAC CCCTGTTGTTGTTAGAACATCAGTCTGCTCGACACCCAAATGTTTGTaat ataattcaaaattttcacattAGATTAAAGCTGTACGTCCACACAAATTG AAGACTTTATCCAAAAGGAATAAGACTGTATCAAGACCATATGGAGGTGT TTTGTGTGCTAAAGCCGTCCGTGAAAGGTATTTATGATGTTTATCTGTTT TGCTAGCCAGGGTCCAATGCTAACATGGAACTGTTATGCATCGAAATAAG GATTAAGAAAATGcatcacaaattttgacaagcATGTTTTTGAATCTTTA AATGGATTACTTTCCACTTTTTGCTTATAATTAATTGAAAGAATGTATCG CCAATTCATAGTGCGATTAAGCTAATTCGATCACTGATTGTGTAATTACA CACCTACATTTAgggggtcttgggttttgatgaaccaaaagtaaggggtg ttaaaagtatgactttcctaagggggTCTTCTTAGATAAGTGGATCTTCC ttgaatacactcttctcgagatgcataaatttattgttgtcctcgttttc aaacagatttaattgctataaaattacatattcacaatcataattgtgtt gtttacacctcatgagacattttgaaattcaagtaattttgttttagagt taatgtttgcgttttgggaatttaaattggttaaatgtataatttcatag caatgaaatctgtttgaaaacgaggacaacaataaatttatgcatctcga gaagagtgtattatgcaaaatttcaattttctgattttctaagTAGGGag tgtgaaattttaaatgaatttcctaagggggggttagcacttaaaggctt acctaaggggggtcaagacccctctagaaactgaTAATTTGAGTGGCTGC TCGACAATCATCACAAAAATATAacagttttagatattttaacaTCTTTC GGAATTTAAAGCTTGGTTGATGATTGTATTGTCAACCACCTCAATTGATT GGATTTTTTCATTCAAGGGGGGTGGTTCCAGGTGGCTTCCAGCCATATTT aaacattttgagcttttagatcttAAGTCTTGAGTCTCACAATAAAacta aaactctactttccaattGTACTTCAAAGCACGAAAGAATCtcttattga atttaaaaattttgagggAATTGCCTtaagtctttttgaaatttttgtat gtATCAAATCTTCAATCGTTTTTTCTCAACTCGTTTTCTCACTTAACAAA CGACATAAGTGGGCCAGCGCGTATTGTGCTAATTCTtgtcatagtgcgga aaggggtctgatccccccttcttaaatgattcCCCCTTcttggccccccc cccccaacgtttaaaaatgcctatcccccaagggttttgagctaaatttt cgaaaatatatagTATATAGAAcccattcaaatatagcgcttttaattct cctataaacaagcaaaaaaatttccacaattatatttgactatcaaaagt tacaggcattcttgtttccgcTGCCAATTATAtcagtcaggtagaattag gtcATAAACTGCCAACACCGTTTAAAACGCTTATTTTTGCTGAGTCGgca ctttttttcgattttaaaatcGCTATTATATCTCGCCAACAGTTGGTTTG AACATactaaaccatatatttttctgaaagcccaTGATCAGGGCTACATG ACTAGCTCATCGACGTTCCAATTTATCCTTCtcagtaaaaatgctgacgt catcaaaatcgtcattttttggactttagaggtcatatctcgggaccacg tggtccaaatgtcaaaagtgaccccattgTCTTTATCTACTCATCGAGAG GAATCTCCCTGTCTAGTTATTTGTGAcatttgaaaacaattaaaaatcag TTATCAAGGGTTCCCCCTTgattaattgtagaaaaaagtaccatggctgc cattatggatttgagggtATTCCCATCTTCATGGGGgtggggcttttttt ttggtgattcctgacattttcctggacctctgtgcaaaatttcatctcta caccatttttgtctgggtagttatgcaattctacctgactatatCTGGAC ATGGTTGCCACGTCTGCCAGAAAAGTCAGGAATTGGCGTACATGTCTGGA AAAGAATAGAATTTGaaggaaatagtcctgaatgaaGCCTAGTAAACTTT CCGGTAATAGGAAACTTTTACCTTGGCATTTGAAATtcctaaaaaaaatt tgctCGTTACGCTCGCAACCAAATCTTTAAATCGTgttcacttttaaatt tttcatgacGTTGTATTCCTCAATCTGGCCTTTCAAATGACATTAAGGAA AGACTGAAAACCTTCCTAATGGATAAAATGTCTGGAAAATACTAAGTTTT TTGTCGAAATATCTGGAAATTCTCTGatattttcaggtaaaaaatctGGC TTTTTAGACTGAAagtctggaatttttttttttgaacttGGCAAACCTGT AGCAACCCTACTGGATACATTTCAATTTTGTTTCTCTGCACTCAAAGAGC TGTAGAAACCAATTGAAACCGTTCCTTTCCCACGCACTGCTACCTTTTTC ATGATATGAAAGTAGCCTCTACTGGTGAACCCAATGTACCAGTCTTGTAC TATGCTTTCTTCGtcaaatacaaatttattttttagcgGGTCGAAGCTTT AAGGGTCTTTTCTATGAAAAGCTCATGAATTGAACAAcgacaatagacga tatcgcgtttagataaatgcaatgcattctggtttctcggggacccTCAA GGGAATTATAATATATTCCAGATCATTATATAATCGACATAATAATTCCT TTGAGAGTCCCCGAGAAACCAGAATGCTATTACTATCAAAATTTCAACCT TATTTTAATTTTATCTATTTAGAATCGTTCGTGCTTTCTTAATCGAAGAA CAAAAATTGGTTGTCCGTGTATTGAGAGCTCAACAAGGCAAAGGGAAATC ATCGTGATTTTTTCATGTGAATATAACATAAAAATTGAAATCGTTGTTGT TGTTGTTTATTTCCTTGGGACAGTCATTTTACAAGTACAATTTATTCTTT GG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052596TCONS_00052596Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:607998..614299 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
313.6 314.99 364.5 409.53 230.31 189.49 266.99 291.55 377.29 319.98 402.59 497.85 584.54 593.82 565.57 525 628.15 603.9 352.43 365.4 640.59 597.4 468.22 429.2 493.22 538.18 599.96 624.4 382.36 391.91