XLOC_033259 (gene) - C. hemisphaerica

Overview
NameXLOC_033259
Unique NameXLOC_033259
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:684805..688349+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033259 ID=XLOC_033259|Name=XLOC_033259|organism=Clytia hemisphaerica|type=gene|length=3545bp|location=Sequence derived from alignment at scaffold_218:684805..688349+ (Clytia hemisphaerica)
AAAACAAATAAGCCaagaaacaaataaaacaaacagTTTTAAACAATGAC
GAAAGGTGGATTTGAAGTTGAGTGATAAATTGCATTTTTTGCGATGAAAT
CTATTCTTTTCATCTTGAACAggtaaaaatattgttttgaaaaagtctTA
ACTGACCCAGTTGAATTTTTATTACATGAGATTTAATTTAAAAGTACATA
AAGGAGGTATTTCCCAAATGCTTATTGCTTTGGGTTAGATTTTGGATTAA
GATTGATAGCtacgatggcccagaaggctcattATTGCTGCGCGCGAGAA
CATGACTGTGCGCGAGAATCATGCTGTGTGAGCGAGAAATATGTTGTGTG
AGCGAGAAATATGTTGTGCGAGCGAGAATTATGTTGTGCAAGCGAGAAAT
ATGTTGTGCGAGCGAGAAATATGTTGTGCGTGCGAAATGTATGTTGTGCG
CGCGAGAAGATGTTATCGCGCGCGAGAAGATGTTATCGCGCGCGAGAGAA
TATAGTCTAGTGCGAAAGCAAAGGAGACATATATTAGCAAAGAAGATATA
GTTTAACTTCCAAAAATAATGATTCTGGTCCTGAAATCGTGTCGCTGTTA
ATTTCATTCGGGTCCTCTAAATGTATACAAAGATGAACAATCATATCCAA
AATGATAGACAAAGTCGCGCAAAATGTTAAAGTTGTTGCATTTTTGTGGT
CATGCTGCTGGTTGCTGTGGTCCATGATTGATTGGCAAATTAAATATTCA
TCATTGGCTATATATTCATCATTCATATTCGCAAACTAAATATTCATCAT
TCATactggttgaaaaccttttcCCGAAGAATCTTGTTAAGCtgaaaaca
gtcaaaaaacatGTGTTTTGAGGGCATGTATTCTACAGACTTGAATCATA
AATTCCAGACTCGATTACAGGAGGGAGGGCGGAAAGGGCGGAATTAATAT
AATCAAACATCTACTTTGATTTTTGTGCTCGCGCGCAcagtatttttttt
ctcgcacaCAATTTCCAACTTGTGCGCGCACAACATACTTCTCGCGCGCA
TAATATACTTCTCATGCGCACAACATACTTTTCGCGCGCACAATATACTT
TTCTCGCTCGCACAGCATATTTCTCATGCAGAGTCATGTTCTCGCGCGCA
GCAATaatgagccttctgggccatcgtaGATAGCATTGGTACAACTGTTT
GTTTGAATAAGCATTAATTAATAGTGGAATATTACGCTTAATCCAATGAG
GTATGGGTATATATTCCATGCGCTAAAATGTTATAATAACTCTTTGtatg
aaaatgtttgttttgatatttcagGAACATATTGCAGACTGTAGGGAATT
CTTGCTCTGCTGTGATTATTGTACCAAGGACGATATTCCTCGATCACAGG
TTtaggaaatttctttttctgtCGTTGAGCTATTTTATGTACTGTTTATA
ATAAGAGTGAGAATTATTTTTATGTAGTTAAGGTATTACACtttcttttg
acttttgcttGGAAATACTAAAGTTTGGGACCCtagccaaaaaagaaaaa
gtttcttatcaTTTGTTATGCTTAGAGTTTAGGGtgccattttcaaaaca
aaatcgaCACCACCACCTGATCCTGGGTTGTATGTCTGGACCTTGAGCTG
CAAAAATTTCTTGTACCCCActttattgtattatttttcaATGGCTCTAA
CTATAAAAGCTATTTATTAACTTTCCAGATGGAAGTTCATCACCTCCAAG
AGTGTCCAAAGCTACCTCATTCCTGCAAGTTTGCTGCTGTCGGATGTGAA
AGGAAAGTTAGAACCTTTCCCTAAATACATTCGCTGAATATAATCATACA
TTAGTATGTATTTATAGTATTACATTCACAAGAAAGTccaactttttgga
cctaccttaaggtTATAAACCtacctataaattaacccgtgttcgttagt
tcgttcgttagtacgttagttaccaacttttctcgagattggctcattca
atttttctgattttttgcacaaagNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTTtagtttcaaattgtttttaaaataatggaatatattttttcaatt
ctccCAAATTTGGTGAATATAGGATAATGTACTTTTTCACCTCTCTTAAG
TTGATCTTTTCGAATGGACTCTTTTACATAAGATTTCGTAAAGGGCTGTT
AATGAGATTCAAGGGTTGTTTATAGGGTTTCCACAGCAAAATAATCTTGG
TACAGGCTttgtaatgaaaatatttattttttccagaTCCTTATAGGTGA
TATTGAAAATCATTTCAATGAATCAAAGGATACTCATTTGACTCTTGCAT
TAGAGAGAATTGCTTCGCAGAATGAAGAACTTAAACAACACAAAATCGAG
AATCGAAATCAACAACTTGAGATCACATCATTGAATACAAAACTGGAAGC
GGTTATGCAGAGATTGgagaaaacagaaaagaaattgaatataaCTAATT
TCACTgatgaatttgttttaaagatccaaaattttgcggaaaatttcaGC
ACTGGCAAAAAAATTAGAACTTCATTTTACACTTCCCGACGATACCGACT
TGCGGTCTGGACTCCTCCAAAAGGCGCAAAAGAGAGCGTTTCGGATCATA
TGTCAGTGTTTATCCGAGTAACCAGTGGACATTTCGATGATAATATccaa
tggcctttcaaagctaatatagaattttcggttttatctaAAAGTAAAAA
GACATTTCATCACAGTATTAGACACCACCAACCAAATTTCTAAACATTGT
TTCCAAAAACCAACGAATGATAATAAATTTGGAAGTGGAATGGGGTATTC
ACAATTTGTGCCCCAAAATAAACTTTCATCTCTTGtagaaaatgacattt
tatcTGTTAACGTTGAAATCATATACCATTGATGAATGCTTTTAGCCAGT
TGACGGACTGCTAAGTAAGAACTTGAACCTTAAGCACGATTTATGGGAAG
GACATTCAACTTTTTAGAACACTTCCATTTTGATACACTTACCTCTTGAA
AAATAATCATAAAttcaaaattgtcaatttttggttATCAATCAAGGTTA
AAAGTAGTTTGGAAGAGTGATGGAAACATACCAATCTTGTGTATAAAACA
TTTTATTACTCCTTTTGTTGATTTagagtttttattttagtgGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052613TCONS_00052613Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052613-proteinTCONS_00052613-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:684805..688349 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.73	2.66	1.73	2.02	0.64	0.35	1.54	1.49	0.92	0.57	1.51	1.53	1.06	0.88	2.71	2.57	1.88	2.46	0.77	0.61	1.72	1.13	2.96	2.62	3.95	4.85	0.45	0.32	1.21	1.69