XLOC_033265 (gene) - C. hemisphaerica

Overview
NameXLOC_033265
Unique NameXLOC_033265
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:752707..757428+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033265 ID=XLOC_033265|Name=XLOC_033265|organism=Clytia hemisphaerica|type=gene|length=4722bp|location=Sequence derived from alignment at scaffold_218:752707..757428+ (Clytia hemisphaerica)
ACTGTTGGTGAACCCTTATTGAACAGTTTTAGTAACTTTGGAAACCCCGG TTAGACACACATAGTCAACTTACCATCAAACCTCTTTAAAGAAGCTccta aaactttcaaaactactaaaaataacatcaaaaacattttaGCGACATTT ATaaaagctctcaaacatcagccattttgagcttttgtttccattttgat ttgttttcctttttctgcCAAGTCAGcttattttttcaatagaaattatG CACACAGCAttcattgaaaaattcaaaaaatttcgcaaaaattctGATCA GTGACTGGACGTGTATTAACCAATTAGAttacttgatttttttgtgagta TAGTACATTTTATTTCCAAACTTTTCTCAGAGTTTGGCTGGATTACCTAA ATAAACTTAAAATGAACATTCTCACAAAATCACCACTTTTTATGTTGTTC ACAGAAGCAGTCAAAAAGGTATCAAACATCTGATTCTGCATTTCATATAG AATCTAACTCGGACTTCCCAGTCTGGAATAAAGAAGGATGGTAGTGGTCA ACCTACATATGACATTAGGGTACATAATGGTAGCTAGTCATTGCTCCTGG CCTTTATTAAACTTGCCAATAGTTGCTCNATTAGGGTACATAATGGTAGC TGGTCATTGCTCCTGGCCTTTATTAAACTTGCCAATAGTTGCTCCCAAAA TCTTTTCTGCCTCATAAGTTTGCGTGTAAGAACAGCAACTATTTTACTTG AAACTTACAACATTCTCCTTTTTTTTCTAACATAAAACAAACACAGAAAT AAGGCCTGCTTTCTCACTTATTAAACATACACAACAAATTTATTTTAGAg caattgaaaataataatggCCGACTTACCTGATAGAAGAAGGAAGAAAGA CAGAAAACATCACCGCAAAGGTAGACTTTATTCACCCAAAAGTCAACTGG ATAGCAACTGCATCAAAACTTATTTCCAGCTTTTTTTTCTCCATAATACA GCCTTTCTGTCAATGAAAAGAAATGTGGTGATATGTGATGGTTTTTTTTT CACTACAAAAAATTCACTTGTGATATTCTTTCTTTAATGCAGAATTATTC TTATGTTTAATAACATGACACCTTatattactttttgttttttcccttTA GGTGCATCAAACCATGCAAGCAGCAATGGCATGGATGAAGAATTTGATTC AAATGATGACAACTATAGTGTGGTCAGTGAGGCTGATTCTGTTGACAGTC AGTTTGCCTTGGAGGACATTGATGGTATGAAAACAAAATAGTTCTGATgg caattaacaaaattgaaaagAGCCTAAGGCGCTttcaaattagaaatttc tttttgagGATATAATATTCAgaccatttttttgttttttagaagGTGTC GATTATATGGAAGACTTTGAAGGAAAGCTAAAAGAGAACATTGAAGGATG TAGACAAAAAGGGTAATTAATCATTTGAGACCCTCTCtaaaccagggggg ggggtcagtgtaccagaaggtggcatgtatcctggggtgggtgggtgttt gagaaaaaaatttgtcatgtactacctgtgtactataattggggtgttgg gtccaaaatcgaatttgattttactacctgtgtaccaaaataggggtgtt gggtccaaaatcgatgttaaaagtgtggaaacaaaaaggttaagaaatta gaaaatagaaaatgtaaagttgttctattataaattgatcaagccaagtt tgtccaagatcattcttccaaacttcttggaatgGATTGAAATCCTACTA GATCCCACTGAAATGAAGGTTTATcgagtcaatgtaaacattccaacatt tgaattcaaacattcaacattggtgccaactctcacgcattgggtgtgag actcgtgcatttccacatggtctcgcatagtttttgaaaagtttgatttc ttacgcattttggatttttgagaaaaattttcctgtttttccgatttttg gaaaaaagttttcccaatttcccaatttcctgattttccgaaaaaaagtt ttcccgatttcctgatttttggaaaaatgtttacccgattttccgatttt tggaaaaaagtttctttttttttcggatttttcTAGGTAGTGCCCGGTAG TAAatggggggtatggggtggttttgttttttttcaaggtactacccggt agtaaatagggggtatggggtggttttagGATTTTTCCATGTAGTNcccc cccccccccccgtctaaACATTGTCTTCCTATCTTGCCTTGTTGATATAT ATATGTGACTCCCCCATCCGATATTTTGAATACCTAAAAATTGATTAGTC TTGGTACGGTAATTGGGAGAAGTCTAATATTGATCAAGATTTTGTTTTGG ATCAGCTTCAGTCattgtaaaaaatttgattgCAGCGGGTCCTTGTGGCT TGCAGACGTTAATGACCCATCTTTTGACCTTCTGACTGCTCCTTAGTGTT TGTTAGTGATGCtcacatcaaaaaattcttttaaaaagatgTCAGCCAGT AAATCTGGGATCTGGGCCTGGGATGCAAAAGACACATTGAAATGGCCTCT AGATTAACTGCACTCGTAGTATCCTTTTGGTAAATTGTTATTGAAAAAGA CCATCAAAGACTGGTCCGATTTTTAAGTACTTAGTAATAAGATTGCTTGG GGAGTCATTTATTTGTACTTTGTCATCAAGAAATCATTGAGACAGGTCCC ATGAGGAACTTTGATATTAAAACAagtcaattctttttttaaacgaAATT GTTAAAATGATATAGAATGTTTATAATTCATAGTAACTTCAAACTCttgc atttaaaaaaaggtttcgctcagaaaaacacaattcttGAGTGAAGAAAC TATTTCGGGCTTGTTTAGACTTCATGGTTATTTTAGAGCCATTTTTTAGA AGGCGCGCAATTTAACAGACTCAGATCTGacgaggctcaaaatttaagat ttttttaagccaTACTCCTTATAAGAAAATGCAGACTCTCATAAATTTTG ACCTCCCTCTCAGATCAGCCActgattttcataattttttataaaccTTT ACAatgtttcttctttctttttagtTCAAATGGTAGACAAGCTTCCCTCC TAGAAGTACAAAAGGCTTTACGCAGGAGATACGCTGGCGAATTTTTAACA GACAGGTTCTCTCCAAGTCTCAAAttcttcttttcattgttttctaccat ctgtttgaaaatattttatatttttccagatttttcaaCCTGTAGACAGA AGTCTATCATATCAAGTAAAGATATTTTTCCAGAATTTCAATATTTGCAA GAAGAAGCTTTGCAATAAATGATGTTTGATTTATGGAAGTTTTGGCTGGT TTTGGTCAAATTCAACAAAAGTGTTGACagtattagaaaaaaaatttaga tagCCAAATGGACATGTTCATTAAaaacgtcaaattttcaaggtttttgt gacatttttaaaTCATGTTACAAAATTATCTATAACTTTTTAATACTATA TGATATAGAAAACCAACCTAAATGATGGTTAAGTAGGTGGATAGTCTTGT GACAGTTTTTCTATACTCTTTACCTAAGTCAGGTAACGATTGAAAGAAGC TTGCCAAGCTTTGGATAATGATGTAACatctgattttttcaaatttttgg ataaTGGTACCCAGAACTTAATATTCCTTTGACATGGGGTACTGGAACCT TTTGCAATCAATTAAGGGGTTTTCGCCCATATAATTTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN AATGTCATACATGTTGTTAAAATAAGGAtaccaatttttcatcattaaaa CAAGTGTATGGTTTCTAATGTTTATTTCAAGTATACTTCATTGTCTTGGA TAACATTGTAACATCAAAACAAGGTCATTTTCAAGATTCTTCCAAAGGGC CTATTAATTGATGGCGAACATCAAAATCTACNCTTCAGTATAGAATAGGT TGggttttgaaaaagtcaaaatttttattgccTGCTTGCTGTGGATAAAA AAGTTACATTATTATCCAGATCTTCTTATACNTTAAACCTGATACCTTGT CTCAGGACAGGTGATGAGTTATAAGTTTTAATACAAACTATAGACAAGAC CTTGGAATTGATATAATTGACAATGGATAATTTANAGACATTGTTACGGA ATTATCCACAAAATTTCATTACTTAGATCCCACAAAATCATGACTTATTa acaaaaaagtgatttttaccattttttaggGTGTCACAAAACTTGACGTT TTTAATGAACATGTCCAAATAAGTAAAAGTGACATTCATTATcataaact tttattttatcttaaatGCAGGGTAGAAACTATGATTGACATTTTGGAGA AACTGATGAAGCGTGGTNCCTTAGAGTGGATAAAATATTATGGAGTTTCT ACTATATGCCATATATAGTTTCATATAATATACCTTTAATAAGTTCAATA AAGAGTTattttcagcgatttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052640TCONS_00052640Clytia hemisphaericatranscript
TCONS_00052641TCONS_00052641Clytia hemisphaericatranscript
TCONS_00052642TCONS_00052642Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052641-proteinTCONS_00052641-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:752707..757428 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.46 12.59 1.57 1.97 58.77 48.05 43.87 49.12 37.91 45.76 46.35 25.66 26.62 26.67 21.57 30.26 35.68 39.57 23.75 30.65 33.24 35.02 31.97 32.77 49.56 44.68 30.42 25.09 42.33 38.32