XLOC_033275 (gene) - C. hemisphaerica

Overview
NameXLOC_033275
Unique NameXLOC_033275
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_218:333067..337628-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033275 ID=XLOC_033275|Name=XLOC_033275|organism=Clytia hemisphaerica|type=gene|length=4562bp|location=Sequence derived from alignment at scaffold_218:333067..337628- (Clytia hemisphaerica)
TCTAATTTCAACATTTCGAACAGTTTCCCCCACATATGTCTCACCACAGC TGCATTCGCCGAAATAAATTTTACAAGATGGGTGAGGATTTTGACTTTTG ACTTTAAACAAACTTTTAACTTTCCTTGTTTGCCATTTTATCATGAGACG AAATTTTTCATTTGTGAAGCTGTGAAACTTTTCCATAAACTTTTTCGAAA GTTCTTCATTTTTCTGGCAGAACGGAATGTTTACGGCAACAAACTTTTTG GGTAATTCGAACATGTTTTCGGGTATGATTATATCATTCTGCTCTTTTTC ACGAAAAATCTTAACAACACTTGCTACAAATCTTGAAGGGAAACCAGCTC TTTCAAACTTATCAACTACAATTTCCTTTTCCATTGAAAAATCTGATGCA ATATTCTTTGTTCGATGTAGGTCAACATTCACAGCATTTCGCTTGAACTT TTTGGGAATTTTTGATGACCAATGGACTGGAACCTTTTTATCACTCCGAA ATACTGATGTGCTAATTTCGCCATTTTCATACGTTAATTTGGTGTCAAGG AATTTTTCGGGTTTCACTTCAACTGTGAACTTGANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NATAAACACAAAGATGTTTATCAGTATTTTGGGAACACTATTCATCCTAT TGGTGTCATTTTTGTTTTATTCTTGGCTTCGCATGAAATGGAGTGACAAA GACTGGATTTATTACCCACAAGGCGCACTACCTGTAATTGGTCATTTATT GTTGCTACAAGATCGAAAGAAATATCACAAGCTCAAAGACACTTGGTATC GCAAATCTAAAGGGACGTACGGTGTTTATTTTCTCTTTCAGAGAATAATA CTCTCTATTGATTTGAAAGTGTGGGAAGATATGCTTTCTAGTCAAAAGTA TCTAGATAAAGGACAAGGGTATTGGATTCTTGAGAAATTCCTTGGTAATG GCTTAGTGACAAGCACTGGAGATTTATGGAAAAAGCGTCGACGAATGATT ATCCCTGCTTTTCATTTTGAAATTTTGAACGAGTTTGTTTCCATCATGGA AAATCGGACTTTGGAATTGATTGAAATGTTGAAAAAGTTTCACGAGAAAG ATGAATCTTTTAACGCTTTTGATATCACTAAACCGTTTTCGTTGAGTATT ATTTGTGAAACTTCGATGGGGATCGATTTAACCATTGAAGAAACCTCCGA TGGTCGATTTAAGAAACTGTATGAGCGGCTATTCAGAATTCTATTCAAGA GATGTTTAAATCCTTTGATGAAAAATGATTGGATATATTCTCTTACAAGC AATGGGAAAGCTTTTAACGCGACTTATGCTGACATTGCATCCTTCGTTAA AGAAATTATTGAAAAGCGAATCGAAGTTCGACGAAATCCTGACAAAGCTG GAGAAATGACACACACTAAACGTAGGATTTTTATCGATTCTTTGTTAAAT TCGTATGAGAAAGGTGACATTGATGTGGATGGGATCCTTAACGAAGTCAA TACCTTTGTCAATGCAGGCTACGAGACAACCTCGACATCTCTTGCGTGGA CTTTGTACTGTCTGGGAAGGAACCAGAGAGTACAAGAAAAGCTCTACAAT GAAATAATCCGTTTTGAGAAAGATAAAAAATTGCAAATGGAAGACTTTAA GGAATTACCTTATCTTGATCTCGTAATTAAAGAATCGTTACGTTTACATC CTGCGGTTCCACGTTTCAGCCGACGCATTCCCGATGGTACTCTTCTCGGA GGAAAAGTTTTCCCTTATTGTACGCTAATAATTGATCTTATTGAAATGAA TCGAAATCCTGAAGTATGGGAAGATCCACTAACTTTCAATCCTGAACGGT TTGAAGATTTTAAATTGAAAGGCAATAAACGAAACCCATTTCTTTTCGTC CCTTTCTCAGCTGGTCCTCGTAATTGCATCGGACAAAAATTTGCACTCAG TGAGTTGAAAGCAGCGGTCTTTCATTTGGTGAAACATTTAGAGTTCATCT CTCTTCAAGATGAAAGTGAATTGATAGAGACATTGGACTTGATTCATGGC TGTGAGAACGGGCCAATGATGAAAGTGAAACCTCGAAAGTAGATAACCTT ACCAAGATTTTAATAAAATTTAATTTTTGTTTTAATAGAACTAACCTAAC AAAGAAAATTAAACTACTAATTTGGTGAATTGATTTCTAAAGTATTTTTC TTTGGCTGACATGTCCTATCATATAGCTGGAAACACTGGAAATTACCACC GAAAGTTTCTGTCTATTGATTTCAGTCTTAGCAAACACTGCTCTTTTACA ACTCGATTGTTCCAAAAGTTGGTAGTTATTTTAATTGATCTTCAAGGTCC TGAATTTTCTGCATATTTAACAAGGATACGTATTACGGAGAGCTTTTCTG TAAGGCTGTTTTCTCAATTTTAGGGAAAAAATGACGAAAATATAAAATTA CAAGGTGAAAAGGAGATAACCCCAGGTTAAACATAATAAAAATGTTTTTG ACAATTCTCGGATCGATCTTTGTCATATTGGCGTCATATTTGGTTTTTTC TTGGCTTCGTGTGAAATGGACTGACAAAGGTTGGATTTACTATCTTCCTG GTGGGCTACCTTTGATTGGACATGTCTTTGTTTTACAAAATCGTAAGAAA TATCATGAGCTCAAGGATGGTTGGTATCGAGAATCTAAAGGGACTTACGG CGTTTATTTATTACTAGATCGTATATTGTTATCAATGGATTTAAAAGTCT GGGAAGACTTGTTATCCAGTCAAAAGTATTTAGATAAAGGACAAGGGTAT TGGATTCTTGAGAAATTCCTTGGTAATGGTTTAGTGACAAGCACTGGAGA TTTATGGAAAAAGCGTCGACGAATGATTACGCCTGCTTTTCATTTTGAAA TTTTGAACGAGTTCGTTTCCATCATGGAAAATCGGACTTTGGAATTGATT GAAATGTTGAAAAAGTTTCACGAGAAAGATGAATCTTTTAACGCTTTTGA TATCACTAAACCGTTTTCGTTGAGTATTATTTGTGAAACTTCGATGGGGA TTAATCTCTCAATCGAGGAAACCTCAAGTGGAAGATTCAAGAAAATGTAC GAAAGACTCATTCATGTTTTATTTCGACGACAACTTAATCCTTTGATGAA AAACGATTGGCTTTATTCGATGACAGCTGATGGCAAAGCTTTCTATGCTG CGTTTAAAGAAATTACTGCATTTGTTAAAGAAGTCATTGAAAAACGGATC GAAGTTCAACGGAATCCTGACAAAGCTGAAGAGATGAAACATACTAAACG AAGGATTTTCATCGATACTTTGTTAGATTCTTACGAAAAAGGTGATATTG ATGTCGATGGGATCCTTAACGAAGTCAATACCTTTGTCAATGCCGGATAC GAGACAACCTCGACATCACTTGCGTGGACTTTGTACTGTCTGGGAAGGAA CCAGAGAGTACAAGAAAAGCTCTACAATGAAATAATCCGTTTTGAGAAAG ATAAAAAATTGCAAATGGAAGATTTTAAAGAATTGCCTTACCTGGATTTA GTTGTGAAAGAATCATTACGTCTGCATCCAGCAATCACAAGATTCGGTCG ACAAATAGCAGATGGGACTGTGCTTGGTGGTAAAGTTTTCCCCGACTGTA CTTTGGTTATTGATATCGTTGCTATGAATCGGAATCCTGATGTCTGGGAG GATCCACTAACTTTCAATCCTGAACGGTTTGAAACCTTTGACAAGCAAAG CAAACGAAATCCGTTCCTCTACGTTCCTTTTTCAGCTGGTCCTCGTAATT GCATCGGTCAAAAATTTGCACTCAGTGAATTGAAAGCAGCGGTCTTTCAT TTGGTGAAACATTTAGAGTTGATTTCACTTCAAGATGAAAGTGAATTGAA GGAAACTTTTGATTTGACTCATGGCTGTGAGAACGGACCAATGCTTAAGA TTAAACCTAGGAATTAACATTAAATTTGAATTTTTAAAAGTAGATATTGA TTTTTCATTCTGTTTTTTTTGTAATACGACATTTGTAAATCGTAGCAGGA CCCAAAGAGTTAGTGACTAATTTTAAGGTCCTCCCATTCGTAAAGTGACA GTTTTAATGTATTTCTCTCAGATTTTGATTATAAGAATGCATTGATTCAG CTTGAAGAATCCATACTACCATGGTTATCGTATTCCTTCGAATAAACGCC CTGGGCGTTTATTGAATAATCTTCAACCTAGGTCACTTTAATAAGGGAAC CTTGCTTAGCCTTTTCGATATCTTTCAGCTCAAATTATTCATTTTACTGT TTGAGTACTGAAATAATTCAATTATTAAAGTTTTCTTCGATATGATTTTC CCTAACGTTTATTTGAGGGTGCGTTTATTGAAAACTTTTCCTTTAAGGAG GGGCGTTTAATATTCGAGAGACTTTGAAGGGTAATAATGTTTTCAAAGTC AGAAAAAAGCCTTTAAATTTTATGATATTTTATTCCAAAAATGATGCTTA AAAATTTTATAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052670TCONS_00052670Clytia hemisphaericatranscript
TCONS_00052669TCONS_00052669Clytia hemisphaericatranscript
TCONS_00052668TCONS_00052668Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052670-proteinTCONS_00052670-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:333067..337628 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CYP4F12PREDICTED: cytochrome P450 4F12 isoform X1 Homo Sapiens
CYP4X1cytochrome P450 4X1 Homo Sapiens
CYP4Z1cytochrome P450 4Z1 Homo Sapiens
CYP4A11PREDICTED: cytochrome P450 4A11 isoform X1 Homo Sapiens
CYP4B1cytochrome P450 4B1 isoform a Homo Sapiens
CYP4A22cytochrome P450 4A22 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.44 7.69 15.76 16.05 1.23 0.95 2.53 2.72 3.26 3.08 3.97 2.07 2.74 2.93 5.53 7.11 2.53 3.1 2.17 2.15 2.28 2.31 9.09 7.92 1.87 2.22 1.97 1.5 8.35 6.78