XLOC_033369 (gene) - C. hemisphaerica

Overview
NameXLOC_033369
Unique NameXLOC_033369
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_220:51543..60704+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033369 ID=XLOC_033369|Name=XLOC_033369|organism=Clytia hemisphaerica|type=gene|length=9162bp|location=Sequence derived from alignment at scaffold_220:51543..60704+ (Clytia hemisphaerica)
tcaaaacaaaacagttcaaaacaaaacaaaccaaacaaaaaGAATAATGG
CGATTTTGTAAGTGCAGTCTGCGTGGTTTTATTTTTCTGTATACATTTGA
AACGTTACCAAAACATAAGATAAGAACAAAGTGATTGTCGGATTTCGACC
TTTGAAGAATGATGAATAAATCATTTGATCGTAAACGCGCAAGAAAAACA
AAGCAAGGTAAACATTGGAGAGTCATTTTggtttgtttagattttttgct
caaactTTTGGTctcatattttattttctcagatTTAACTGATCAAGTTG
ATACCCGTGGAGGAGGGTATTGGTGTTGCAAGCTGACGGggtgtgccgcc
cgactttcgacccttatGGACCCTtagcaaaggaaaattttgtgaatttt
actaCCCTTATCCACCTTTATTGGGActatttgaccaaattttgatcttt
ctcTGGGAGCAAAAAGTTGATATTCTCTTACTTTTCTGACCCTtcgtggg
actgaagtttgattttcggatttttcttatttttacagCCAGACTCTCCC
ACTCGTCTAAAATCTTGAGTATGGATTGATAATCggttattttttttcat
caatgGCTACCGATTGTGATCAATCTATCATTTTAGAGTCAATCGATGAC
TAATTAATCAATCGATCGAGTCTTCCATAAAATCCTGATTATCGATTCAT
TTTCGATTATTGGAATCAATCAATATTCAATCAATCGATTGGTTATCGAT
TAGCCGATTAGTCATCGATTGGAAAAAGTTATCAATTGTATTGAGTCGGA
GAGTCTGGTTACAGGGACTGCCAGGTTCCAAAAAaagcacccttaagggc
ggcataTACCCGTACCCTCAATTtgtctaagtaccccccccccccccccg
gtccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGactgtagtgcagtggtaga
gcatccagccACGGttcacaaggttgtgggttcaacatCCGGGCTACGGT
TCACAAAGTTGTAGATttaacccccagccgggtcataccaaagattctta
aaatggtacttgatgcctctctgcttgatgctcagcaataagagtaggat
caagggtaagtggagcaatccagggagaaagagtggcgccttcccctacc
tttgggtagatagctatcgaaagaggagccttcgggtcgcctccgactgc
ggttgcagacttacttacttccTAGGTTAAAAGCGTTGCCTAATAAAAGG
CTTGTCGGGGACTATCAAAAAGTCCCCACCGGTCATTGAGAGGGCGTGCG
TTACCCTTGCTGGCCGGCGGGATTGTTCTGCTGAGGTTCAAAAAATCGAC
CCTACATGAGAatcgttttttgaaaaaatttggccaaaagttgagaaaaa
aagaactcGGGAATTCCAGACTACGGTGTGATGGAAATATGAGAAAATAT
TACCGAATGGTAGAATTGGGTCTCCTGCTGTACCACAACCCCTTACGTCA
AACGTAACATTAAGGGTCCCTGTTACACGAatattaagagccattttttt
aagagtcttcagggtgtgatacctcatcctcttggattttgatgaaattt
tgaccaaatgatccatcactcaagaaaataagaccctgaaaatttcacct
tgatatctcaagtagttttgaagatacagcgtctcaaagataggctacta
agcgaaaattgaaccctaaaaatcatgaactctggtggggagcagatttt
gaaagccaatgaatttttattcaagtacattagaaagctgatttacagtg
gatttcaagaaatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNttggcaaaaacgtgaaaactaattttcgtcaaaaacg
gTTTTTTCAGTCTAAAATCACGATTCTTGAGTATTTTGGGATGAAAACTT
CCAATAAGTTGCTAATTATCATTTCAAAtctattgaaattttttcctcgA
GCAATACTGGATTATTCCAACCCTTACAGAGTCAATAAGTATTTGAAATT
CCATTTAACTTGGACTATATGGAAGCAAAATTATTTAACCATATTGATTA
TCGAACAAAGAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGA
ACTCATAATACATATCAAGATAAAGTTAACGAATTTTAACAATGAATACT
AATGAAATAATCTAAAGGAGCTGAGAAGGATTAATATTCCAACAAGAAAT
ATCAGAAAAACCTAACCATTAGTAACCTCTTTGAGCTTCTTTGGACTATT
CCCAGTTTGAAAAGCTTAGAAACATAATAAGTATCAAGAGCTCGATTAAT
GGTAGAAGTAAGATTTTTCTAGAGTTCAGAAGGATGAAATATTTCCGTTT
TTGAAGGGTTACCTTGTTCTAATAATGCAAAGTCTACCAGTCACCCAAGC
ATATGTAACATTTCGAATTCCAACATTTCtggcatttttcaaaagtttaa
tgGAATAAATAATCTTTGCACTAAACTACAAATACTTTCGATGAAAAGTT
TCTTTGTCATAATTTGAAACAAGTCTGTAAAAAGGAGCACTTTTGAATGA
GATTCAAAGCTCAAATTGAACGTAAAGACGCTTCTGGGTAATTTATTTCG
CATTTTTTAACACCAGAACTAGTTAGGAATATATCAATCTTAGAAGGCTC
TCTATCACAAGTAACGCTTTATCAAGTGATTATCTAACCTTCTCTTCGAA
AGGATTtgatgaaaacattcgaatgtagcAAGTCATTTAGGATGAATCAT
TCCAACCGTGACATACatgattttttgtaattttggaatATCTCATTCTA
GAGAGCTCAAAATGAATTCATATCTTATCTTACCCTACGGATAAAGCAGG
CTACAAAATTTTtaagtccaagtgtcgtgattaactttagactgtccaat
atttcttgtccagaagatttaaaCATCATTGTTTGCAGTATCTCATAAAA
TGTCACCCTAGTAATGTTGCTTAGTTATTTAAGAATCAACAAGTAAGTAT
GGGTAGGGGGTAAAAGTCGGcatcttcagatcttcttcgcctggtgtttt
ttctgttccatataatgatagaagacatcaaaaaaatatttttttaaatt
ttatgcatttttgacgaattccagtccaaaaaactgcccgggggggcttt
tttaccaaaaaatcagctcttttgaggtttattcttcatatctcttccaa
aacttgctcaaattcaagatgtagtgtttttttatgaaaatttaatctat
tgtgatgcattctgcgcaatctttaaggtcagaagtccaaaattggccga
acccccctgggggtactgattcgcactacaggcaaaaattggaaaaaatg
gcattttctggccttttcaggcctgtaaatatgtcaaaactattgcaaat
cttatttttttcacttgctgtactaattttatgaagaaacagcaaaataa
acatattggattgaaaattgtgcccgttggagccctaaacgagctgtttt
aagccgattttgggtagcaaaatgcttcttaaggccaattttgcaagttc
ataaactttaaactaattgattcacacgtctgaaattttcagagatggaa
gtcttgagtaaagtctttaagctaaatgaatttcaagattttcacttttt
tcaaaaaatcataatggcgtcttcaaaaatcgctttttagcaaaaaaaaa
tcagatttatcaaaatatagcattttttaaggcaagcttaacagcaaact
gagtttaaatgctgattgaaattttttttgcagtgatagtactctggaga
tactccagggaaatcaaaatcatttgggtctgggatttgtctatgtcccc
cattatggaaataaaatccctgtaaagagccatttttcaggcaaaaattc
aaatttggactgaaaaattttttaaaatgacaatagacatgggcccgaat
tttcttgcagtgatagtattctggaaatactccaggaaaatcaaagtcat
ctgggcttgggatttgggtatatccaccatNgctaaaaagtgatttttga
agacgccattatgattttttgaaaaaagtgaaaatcttgaaattcatttt
gattaaagactttactgaagacttccatctctgaaaatttcagacgtgtg
aatcaattattttaaagtttatgaacttgtaaaattggccttaaaaagca
ttttactACAGAAATCGGCTTAAAACAGCTTgtttagggctccaacgggc
acaattttcaatccaatatgattattttgttgtttcgtcataaaatttag
tacagcaagtgaaaaaagtaagatttgcaatagttttgacatatttacag
gcctgaaaaggccagaaaatgccattttttccaatttttgcctgtagtgc
gaatcagtacccccaggggggttcggccaattttggacttctgaccttaa
aaattgcgcagaatgcatcacaataggttaaattttcataaaaaaacata
acatcttgaatttgagcaagttttggaagagatatgaagaataaacctca
aaaaagctgattttttggtaaaaaagcccccctgggcagttttttgggct
ggaattcNGGActggaaaatcttaaaaatggcattagacatgaacctaaa
atctttttgcagtgatagtcttctggaaatactccaggaaaatcaaaatt
gttttccCTGTAGTATTTCCaaaagactatcactgcaaaaagattttagg
ttcatgtctattgccatattAGAGCAGTTGTTAAGTCAAAATGGGATTTT
ggcttgaaatgttgcaatttagccagttttagcacagttttcaattccat
aatggcagatatacccaaatcttaaactgaaatgattttgattttgaatt
ccCGGAGTATTTCTAGAAGAccatcactgcaaaaagattttagcttagga
tcatgtctattgccatttttaagattggcaagatttaagatttttgttcg
aaatattgcattttagcaagaatttcaattccaaaatggtggatatatcc
aaatcccaagcccagatgactttgattttcctgcagtatttccagaatac
tatcactgcaagaaaattcgggcccatgtctattgtcattttagagattt
tNtacatcttgaatttgagcaagttttggaagagaCATGAAGCATAAAcc
tcaaaaaagctgattttttggtaaaaaaactgcccgggggcagttttttg
ggctggaattcgtcaaatatgcataaaatttaaaaaaaatttttttaaat
gtcttctatcattatatgggacagaaaaaacaccaggcgaagaagatctg
aagataccccccaaaaaagttactCTACCCCCTACCCCTAAGTAAGGCTG
TTAGTGTACACAAATATAgagatattggacagtctaaagttaatcacgat
acttggacttagaaattttgcggtaaagcgcaaattattgtcaaagtagg
atttctgaatgagtctaaaaagtttttgaataggaattaagtactgttga
acccatttagttgaagtaacctgcttatatttaggaataatattcaccaa
actgAAAGGCtgaggcttttcctgaaaatataggccctggaatggtagga
aaggccagatgtcagtctcatttttttacatattctatctgtacttaaaa
ataaagaaacagtcataaaatgtcatctgttaatggaaatgacctgaatt
tttttacagttgttcccttaatgccaatgattacttggctagagaagatc
aaccaatattttgacaaaaatttacctttagagcccttaagtgggcctga
tttagcattttaggagggaaaaaacaacgaagttaaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTCATCCCAAAATACTCAAGAATCGTGATTTTAGACTGAA
AAAAccgtttttgacgaaaattagttttcacgtttttgccaaaagtgtaa
aaaacactgacatatctttaagagacttcaaacccccactgagatttttt
gaggttataaactagacctactaaggaagcattactgaaagtttaaaaaa
aatttgtagggggttcaaaaagatacgccatcttgaattttgctccagat
ctgccaaaatagcaattgtttcggccatttttgacggttacgcaaaaata
gaaatcctgaaaatgttatttttgtggccaaaacccaccagtaaaccact
ccaggtcaaaagtttactTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNcctgaaaatgttatttttgtggccaaaacccaccagtaaacca
ctccaggtcaaaagtttgcttcaaaaaagtctccaagtaccatcagcaga
cagctaaaagtgcttctaAACCCAGATTAAACAAAGTTTGAGGCCCTCTA
CAGGAGATGCtaaagattttcggggaaaattttggagactcaatttgatt
ttttttgattccctacaaaaagttcttgaaatccaatgtaaatctgctcc
ccaccagagttcatgatttttaggggtcaattttcgcttagtagcctatc
tttgtgacgctgtatcttcaaaactacttgagatatcaaggtgaaatttt
cagggtcttattttcttgtgtgatggatcatttggtcaaaatttcatcaa
aatcTAAGAGGGTGAGGTATCAgactttctttattctgaagatttttaaa
aaaaattggtttttaatTACCAGCACAGGGCTCAATTTTGAGCTTAAACT
TCATTGTGCTCATTATTATCTTTGTGGACGAAATCACATCCATGCGGTGA
AAGCATTGCTTGGCTTCCGAGCTATGTGACTAACTAGTTCAACTGGACGT
GTCTTGTACTATTTTTTATTTGCACACATTCACATTGACTTTCTATTTAG
AATTGGTTATCGAGAAGAAATTAAAGTTCTTCGTTATGTCTGTTGCTTTC
AACGGATCTGATGGTCATAAACTTCCAAGTTTAAATGATTTATATGAAGA
TAGCGTGATAAGAAAAGAGGATCCGTGCAATTTATTGGATAAAAAAGCCC
GCTATCCTTGTGAGCCCACCCCGCTCCGTGTAAGCGCTTGCTTAATGAGA
TCAATGACAAAACAAAACGATACACCTCCCCCAAAGTCATACAGGACCCT
TTCAAGTCGTCGACGAAACACGCAGCGACGCAATAACACCAGTGTCGTTG
TTACAGGGCGCCATTCGAAGGAAAATTCAACCACTTCAGTTAAAGCACCG
GGTAAAGTTGAACCACATGTTTTAAAACAGGACCATTCGCAAATTCTtga
tgaaataaataaactctTTCAAAATAATTCAGCTCAAAAGAACGTCAGCG
TTTTGAAACAGTTGTTATTACGTAGCGCTTCTGAGCAACAGACGACTGCT
TATAATCAGGCGAATCAAAAGAGACTGCCAAGCGTgattaaagaagaaaa
taagaatgTTGGAATAGGTAATGACGAGGTTAAGAAAACTGAAAGTTTAC
NCGCCAAGCGTgattaaagaagaaaataagaatgTTGGAATAGGTAATGA
CGAGGTTAAGAAAACTGAAAGTTTACGAGAAACAGTATGGAAGAACTCTA
AAGATCAAGAAAGTGACGAGTTGATAGAAACAGAGGAAGAATCGGTTGAA
ATGAAAGTCGTTAGCGAGGAAGAGGTCAAAAATCAAATCGAAacacctga
aaatgaaaatcaagatgAATTATCAGAGGAAAATTCCCGAATGCaagatt
gaaaaaatttctgtcAGCATAAAACTTATTGTTTTCATGTGCTTTATTAT
CGTACTTTGTTGATTTGAACCCTTGGTCTTCCTTttatacattaaaggaa
gaaattttggcggatggccaaaaaagttttttcagaaggaatttaatttg
gcggacgaaggacatttttgtccaaaaatcgccattaaaaaaggaaaaat
ctgttttaaagcctgaaatagcacacatttgggggaataaatagagcaac
ttaaatttggcg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052791TCONS_00052791Clytia hemisphaericatranscript
TCONS_00052792TCONS_00052792Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052792-proteinTCONS_00052792-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:51543..60704 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.04	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	77.86	49.62	0	0	0	0