XLOC_033373 (gene) - C. hemisphaerica

Overview
NameXLOC_033373
Unique NameXLOC_033373
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_220:232792..236470+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033373 ID=XLOC_033373|Name=XLOC_033373|organism=Clytia hemisphaerica|type=gene|length=3679bp|location=Sequence derived from alignment at scaffold_220:232792..236470+ (Clytia hemisphaerica)
GTCATACTACACAATGGATCTATTGTATTTGGTAAACAATAGATATCAAC
TCTCGAGAAACGACTAAATTTGTCGTTTTAATAAAACATAAATCAGTCTC
TAACACGAGTGTTGCAAAGCGGGCGATAGCTGACGAACATTGAAGTATTT
CTACCGAGTATTGGAACCGAGAATATATCgtttatttgctttttttttga
cttgttGACGAGTTTATATAAAACTAAGGTAGGCGCTTTATGTGACTTTT
ATGTGTGTTGATGACAGACAAGTTAAAACGTGTATGCGTTTCCTAtcgaa
atatgtcatatttcCTTTTACCCGGAAATTATAATATTTCCTAGTTTCTA
TTCCGGAAATAACTTGCCATTTCTCACGCAATCTCTATCATTACTGAATA
ATATTATGCAAAATGCTACTTTTAAAGGCAGCCAGCATGAAGATGACCTT
AGTACCTGATTTTCATAGCGCTGTTGATCTCCTTATTGCGCCAAATTACT
TTTGGTGCAACACTATAATTTAATTTGCTGCCACCCGGTAACAAAGAAAA
AGTATCCAAAAACCTTTTCGGAatctgatatttttttatttgagattCTT
CACACAACGTTGTCTCGATGTCCatttaacgttcataacgtccataatat
gaacgttgaaacaaagtTATGTGTCTATTAAAGAGTTagcccccttctca
cagacccagtaggatttcttcagccagtgggggtaaaaataacggactga
agcTTGATAGGGATATTCCAATATTCTTTGTGGCTAGGGATTTAAATTCT
AatgttttcaagtcataaaattcagtggggatggaaaaattaGCATTTAG
GATATTTCAGTTAGGATAGGTTTATTTGACAAAACTTGGAGTATAATtat
ccactggggacgatattgtGGTCAATTTTCCCATAGTGGGAAGAGGCTCT
AGTGGGAGAAGGGGGTATAAGAATGCTTGCAGCTGTTTTGTAGATGAACC
TGTGCATCGAAACATCGAAATTCAAATAGAGTGAGCGGATTAATCGATCA
AGAAAATAATGACAGTCATTTATGGTCATTTGATAAATCATTAAGTTAAG
TTACATCATGCAAGtttcatggaaaatattttctatgTGGGTTACGCGAT
GAATAAACCTGCAAAAACAAGCAACACATTACTTTAACACTAACATTTCT
CTCTCGCTACACCTTTTGTTTAAATAGTTTTCTGACTCCCACGAGTATGG
TATCCACTTATCCAGGCCTTTATAAGTCTCTGAAACTGACATCGGCACGA
TACAGAAAAGCAAATATGACTTATCAAAACATATATATTTTCAACTCAAA
GTTCCTAGTTTTCGGGCCCCACTGCGTCTTGTTAATATTTTCCCGCCTCC
ACAATTTTCGTTTCGGTTTCAATGACCTATAGTGGTATATATTAAAATTT
TCCCTATTTCATTATTAGATCTGTGTTTAAAACCTTAAATCCatcatttt
tgatattatttacTTTGACAAAATAAACCTTTCTCAgaataatatttttt
agaaaCGAAAATTTTTCCGCTTTTCATTTTCGAAATATACTTATGACAGT
ATGAATTAAATGATATAAATTCAATTGTTTTTAGCTTCTGAAATGGCATT
TCCAGATTTTCCACTGACGAATGAAGACAACACAGCAACTGCAGATCAGT
ACACACTCAGCCACCATAAAGATTTGAATAACAACTCAACGGAACACGTA
TCGGCCACCACACAAGAACATATCAGAAACATTTCAAATCTTAACATTTC
GAATAAAAGtatcttggaaaaattcgaagcGATGAACAAATgtattgatt
attttcaacaacAGCTGCAAGAACATAAAGGCTCTATCAACGAACTTGAA
TTTAGCTTAACCTCGCATAAACGAACTCAAGGTAAGCCCATGATAAAATT
CTATAATCACATCTTACTGATTCTTACGGCTAGAAGAGGATAGAAGAGCA
GACCTTAATTCAAACAGGGTGGAAAATATCTCTCCTTTACAGTTAAAAAA
TATCTCCAAACTTTATTGACTTCACAGCTTTCAGGAGTAATTTTTCCATA
GGGCTATTACCACGGGGTGTAGCTTTAAAATTGAaactatttgaaatttt
atgtaTGACCTGTAGATTTTTTGGTAAAGAGTTCTTCCGCAATATCAAGG
ATAATCcaaattaatttttctcaaattgtttCATTCAGGACCCAAAGAGG
ATACTGATGACGACTTACATTACGAGTCTGGTTGCGGTTTATTCCCTTTT
ATCCAAAAATGTCTGTTAAACGAGACCAAATACTACGATACAATTCGCTG
GGTAAACAAGGCCGAACAAGAATTCAAAATCGTGGACCCTGATAATTTAG
CGACACTTTGGGGCCAAGAAAAACGTAAAGAGGGAATGACAAAGCGTAAA
CTGACCAGAAGTTTGGCGTATCTCGTAAACGCGAAAAAGAAGTTACGCCG
CTCATCTTCACGCACATTCATCTATCAAATTATCAATAAATTTGGCAGAA
GTATGTGTCCCTCACCTGAATCTAATTGGGAAGAATCGCCAACCACCCTT
GAGAAATCTCAACCAACGCCCACCATggaacaaatgaaacaaatattACG
ACAAAATCCTAAATATTTACAAGTCTTGATAGAcgttcaaaaacaacaaa
aagaatcAATTGGGAGTAAGAATATCCTAAAAGCTGGTTCCAAACGATCT
TCAAATACACAAGACCAACAGGTTCCAGAGAAATCAGTCAAATTGAACCA
GGAATCTATCTTCAAGACTCCCCAGCAGCAATCACAAAACAACTTCATTG
ATACAGCTTCATCTTTTAACTGGTCCCAATCATATAATAACAATAACTAT
TCACCATCACCGGCTAATGACAGTTATGTCAGTTTTAGCCCTCTCTCAAC
CTCATCAGATGGCAGCTCAAACTTTAGTCAAGTTTGCGATGGTAACAATA
ATTTCATGTCAACAACTACTTCAAACTTTGTCTCTTTGTCTGACTcatca
aattcaatcttttctGGCGATTCACTTTTCAATTCTGGTAACTCTTCATC
TACTCTTTTCAACAATAATTCCACGTCAAATTTCATGCAGCAAATGTCCA
CGACAGTATCTACGGTGAATTTCACACCAGAAAATTCAACCTCAAGTATT
TTTACTACTCCTGTTAGTGACACCAACAGCTATAGTCAACAAGTCACATC
AGtacctacaaactttacaaatccAATCGCTCATTCGTTGGTCAGCGATG
TTTCCGATATTGGATCTATTATTCCGACATTCTGTTTGAATCGGAATTCA
GGATTGAATAATGACATTTTTGCTTATCTTCAATAATTTTGTAAGAAGAG
CTACTTAGGaatcatattttttataaagttttcttCATGTACATATTCTT
TTATAATTTTAGTGAGAATATAATTTCACTTGAAAAATCAGATAGATGGG
AGAAATTTATTATTAGACGCTACTATAGATGTAGTTTAGTAAAGTACTAC
TTCGTAATCCTTCATAATCTCAATTTGTATTTAGTTGACAGGTAATCTTT
CTCTTATGCCTATTAAAagtttgtaaatatttctttaccGTAAAAAAGAT
TGTACATATATACTTTTTGCATAGATTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052803TCONS_00052803Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052803-proteinTCONS_00052803-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:232792..236470 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.23	1.48	0.48	0.54	0.54	0.49	1.92	2.5	1.43	10.54	2.62	1.68	13.08	15.75	14.14	15.36	2.65	7.46	16.12	27.04	3.98	3.49	1.88	1.56	3.06	4.59	98.32	86.14	51.77	43.96