XLOC_033455 (gene) - C. hemisphaerica

Overview
NameXLOC_033455
Unique NameXLOC_033455
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_222:545811..551946-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033455 ID=XLOC_033455|Name=XLOC_033455|organism=Clytia hemisphaerica|type=gene|length=6136bp|location=Sequence derived from alignment at scaffold_222:545811..551946- (Clytia hemisphaerica)
CAGGTTTCAACGAGAAGATGTTTGCAGACAAATGGGGTGGTGAGGATTGG
GAACTAGTGGATCGTATCATAGCAACAGGGATACAAATCATCCATTATCG
ATTGCCACGTTTTTATCATTTGTACCATTCACGTAAAAAAATGTGGAACC
ATTATTGAGAAAGGTATTTGTTTGCTTCTTTGATCTTTGTTTATTTACAG
GGAAAATGTTTTCTTTTTTACAAAATCCTACAAATTAGTTGAAATTATTT
ACATTTTAGTTTAAAAAAAGGATATGCGTTTTTGTTCGACAATTTGATAT
TTCTTCTGTTGTGTTGTGATGAGACGTTTACCCGATTGACGGTTTTGTTA
AAGATTGTTCTGTTGTTGTTCTTTCAGTTTTTGAATCTGTTCTTTGAGCT
CTTCGTTTTCTTTCTTCAATTTTTCCATCTCTTCAACGATGAGACATTCT
TTGTACCTTCTTGCTAACCGTGATCTTCTTGAAGCTTCGTTGTTTTTGCG
ACGTCGTTCGAAGTATTCGGGGTCCTCGTGTGCTTGCGTGTTGGTGTAGC
GATGGCGACGCATGGAGGGCTTGGAAACGAGAGGTTTGGGATTGAATTTG
TACAAACGTTTGACTTTCTTGGTCTCGTGATCGTCGTCTGAAGTATCGCT
TTGTGAGAAAGAGAAATTGGTAGAATCACTGTGAAATGATGGTGTGTTTG
TTGTGTCTGTGTTGTGAAATGTCGGGGAAGTGTTTTCCGTGTGGTGGAAT
GTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTAACAATCAGTGGGTTCTCCATCATTT
GCTCTGGCACACTCTTTTGCATTCAAAAATATATCAATCTTTGCAGATTT
TCCTCGAAACTATCGCTAAAATAATAGCACAACGCACCGAATCTTAAAAG
ACGTAGTAACAAATCTGCACAAGTTTTTTCGTTTTTACGACTTGCAATCC
TATCTTCCTTTGCGTTAATTATTCTTGCACGTTAATTAATTACAATATCA
AAAGAAAGGTAATAACTTTCACGGTTTTCCAATCATTTTGAAATAATCTG
TGGGATTGGAGATCGTGCAAATTTCTAGTTGAAATAATTATGACGTGTGA
GATGCGGAGCGCTATTGTATTATTCAATTTTAAGCATGCCGTAAAATTTA
TCTCTACTGCAGAAAATCGTGCACTGAAAACACTGTCTCTGTTATCGGAA
GGTATATCCTTTGAGTTATTGTTAAGTAAATCGGTTGGTTAGTTTACGAT
CGCAGTCGAGGGCGACCCGAAGGCTCTCATTTCTCTAGCTGTCTACCGAA
GGTAGGGGAGGTCGCCACTCCTTTCCCTGGATTTCTCCACCTACCCTTGA
TCCGTCTCTTTAGTTGCTGAGCATCAAGCAGAGAGGCAGCAAGTACCAAT
TTGTGAATCTTTGGTATGACCCTTGGGGATCGAACCCACAACCGCACCGT
AGCTGGATACTCTACCTTCATGCTACGGTCGTTAACTTGTTAACTTGTTA
ACTCAGTCGCTTTGACGGGCGTTTTACAAAATACAAGGGTAATTCACTGA
ACAGGTTCGAGCCCGGGCTACTATCGAAATCTTAGCATCGTTCCCTTCAA
AGACGATGAATAAGAAAATAGCACATTTCAACGTTGTCTCAAGGAGTTCT
GCGATGAGATGTACATAAATCACCATGATTCAACCATGTAGATGTAAGGT
GGTCTTCTACACTTCCGCATGGGTGATAACTCAACGGCATACTTATTTTT
TTTATTAATTTCTCTTTTATCACCAAAATAATGGTATATAACTTAGTGCA
AGCTGACTATGGTAAAATGAATTAAGAAAAAAAATCGTAAAAGGACAAAA
GTTAAATGTTTTAAATTTTCAAAATTAAAATAAATTTCTTTAAATATTTA
TTTAAAAAATTCATGAAAAGGATTTCCTCTGGAATTACACAAAAAGTGAT
TTCAGAAATAAAATATACGAACTGTTTTTGCTTTACAATTGCACGCTAAA
AACATGTCGGGATTGGAGCGTTCGATTTTCTTCTCTTGACAAAGTAAAGG
ACCATTAGTTTCACAAAAATAATCGATATAAATTCTTAGCTTTGCTCGAA
GCACTTTTTCTGTGACACGGTACTAAACATCTATAACCTTGATTGAATTA
ATTAGCGGGTATAATACTTAAATATACTGCTATTTGTTGGAGATTGGCAT
AATTATATAANTTTGATTGAATTAATTAGCGGGGTATAATACTTAATTAT
ACTGCTATTTGTTGGAGATTGGCATAATTATATAATTCTATTGTTTGTCG
GTTTCGTATATTGAAAACTCGGTTATCGTTTCTCGCCGACCTTCAGCAAG
CAAGGAGATGTATGAGAGCCGCCCACAAGCATAATTATCTCTCTGTTTAC
TTTCCATTGTCGTTAATTTATTCGTTCGAACGCCTCCTCGACGGATGGGT
AGAATTAATTAATTATGCAACAAGCATACTTGATTGTAGAATGCAATTAA
AAGAGGTATTGTTTTGTAGTGACGATGGTTTTAATCACTGATTATCCCTT
TTATGGTGTGTTTCTTTACGCTCCCACGAAATTTGTGCAGTGGGTGAACC
GACGCTTTCGGCTTTGGCCGTCTCTTATCTTCAATCATTCGTTTTACATA
TTGGCGTGTCTTTGCTTCTTTACGTATAAATGCAAGAACTCGATGACAGC
CTGCTTTGGGTTCTTTTCTTGAGCCACCCTTTTTGAACGAAGCCGTGCCA
TTATTTTCGATAATAGAGCCCTTACAAAATGGTCTTGCTTTTATTTGCGT
GTCTTTACTTTGAATTTTACATCTTACTCGAATGTTAAAAGAGAGGGGCG
ACTGCTCGTGTATGTTTAAGGCTTTTCCTGCTTCAAAATAAGAGGGGTGA
AACTTTCATTTCTCAGATATGATGGATTTTCTTTCATGGCTTTTCTTTCA
TGGCTTCAATTTTCCAATATCTTCCGCCATTCAGTAATACGAGTCGATGG
CTTATGTTTGTTTGGGGTGGAGAATGGAAGGATAAAGTTAAAGCTGTCTA
GTTCGCTTTTCATAGATGGATGGTGGAGAGATGCTAGACTGGAGCCGTTT
TTGATACTTTTAAGACAGCGGTATGAGTGCCATACATTTGTATAAAGCCC
GAAGGGCCAGATATTGTGCTTTTGCTGAAAAGTGTGCCGAGGTTAGGTAG
GAAATCCTACCTATGTTTGGATTACATTAGCTTGTTTGTCATATTTTATT
TTTGATTCAATGAATGATACAGTTGCAAATCGTTTGTAATGAGGTTCGTA
ATTGATCGAGTGGTCGGTCCACGTCATTCGTCGAGTAATTAATTGACTTC
ATTTCATCAAGTAGTCATTTTGTTACACAATCCTTCAATCAGCTTGTCGA
GGTAAAAAGGAAGAAAATCTCGTTCCTTCATTTCATCTCTTACTCATTTT
TTGTGATGAGTGCACGGTGTATGACGTCATAAACAAATTGTGTCAGGAAT
TACGTTAAACAGGGCAACATCATTGTTTTGTTTCGAAAATGGTGGCAGAT
ACCACTGTATAAAAACTGCCATCAGCAAGTGAACATATAGTTGACTCTAG
CTAATCTAAAATTTGGTGGTCGATCTAGTTTCGACATACAGAGAGGTTTA
AATCACAGAAAATCCATCAAGGCCATGACAAAGAATTCTTTTGAATTTGT
GGAAGGGATCGAATGCCAACTCTGGTTTCTTTCGGATCTTTCGCAGACTA
CATTAGCGAATATAGAGCTACTTTTTTTTGAAACGATTCGGAACAACCCG
CCGCTGTTTTAACGTGCGTGCGATTGAGGACAGTTATAGTGCTGATTTAC
TGTCGTCCTCAATCATTTAGGATCTAGACGAATCCAAAACTAGCCGTCTT
CGCCACAGGACAAACTCCATACATAAAGTCGCTACCGGTAAGGTTCTAAT
TGGACTATATCCCAATTGTGGACGACATTTTAGGGGTTAGAAGTGCGAAT
TATTCCAATTACATAAACTTGCCACTATTAATGTGACGCAGAGGTAAACA
CATGTACGACTCATTCATCTTGAGTTTTCACGCTAAAATATCTTCATCTT
TTCACAGATTGTGGATGGTTCAAAGGATAGGAAGTGTTCCAACTCCTTCC
TGCACTTCCGTCATTCGAGATGTTGAACAGCATAAGTACAACTTTTGAAC
TTCTGGTTCAATGATGGTCGTTTCCATTGGTGTATTCGCAGAACTTGCTT
CGTGGACACACTACGTGGTCACTTTCTCTCGTCTGGGAAGGCCATCTCTC
ATCAACGAGAGCCTATGCTGCTGTTCTTTCAAATTTCAATTCTATTTTTT
CGGTAGCTGCATAAAAAATCATCAGTGTAACCAGAGCTCTCTTATAAGAA
GCAGCAAACTTTTTTGAGGCTTAGCTGTTCTTATTTTTTGGCACTATGAA
CCTTAAGATATTCTGATCCTGCTCTTGTTTTAGGGAAAAATTTAAATATC
ATTCTTCTTAATTTGTTCTTAACATTTGACGCTTTAAAATTTCATTGTTG
TATTGAAAGATATGGAGTGCATTCAGATTGGATTTCCCCGAGTTCTCGTT
AAGTTTATTTTAGGTGTTTTAAAATCCATTTTGTTTTTCTGACTGTTTTA
TTTTTTATAAGATTTCTAAGATTTACCCAGATGATACATGTAGCAAATTT
AACCAGATTTTATTTATATCGATATTTTATAATTTTAATTCCTATTATTT
TATTGACAGATTATAAGATTTTACGAGATTTTTATTTTTTTGAATTTTGG
ATTGAAATTTTTAGTTTATAAATAAGTATAGAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052982TCONS_00052982Clytia hemisphaericatranscript
TCONS_00052981TCONS_00052981Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:545811..551946 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19	0.25	0.29	0.06	1.98	2.48	6	4.91	4.78	4.93	3.68	3.51	6.68	7.45	1.73	1.49	2.43	2.69	1.46	1.87	2.15	2.55	2.09	3.05	6.15	5.88	5.24	2.64	3.47	3.98