XLOC_033542 (gene) - C. hemisphaerica

Overview
NameXLOC_033542
Unique NameXLOC_033542
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_226:157661..166571+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033542 ID=XLOC_033542|Name=XLOC_033542|organism=Clytia hemisphaerica|type=gene|length=8911bp|location=Sequence derived from alignment at scaffold_226:157661..166571+ (Clytia hemisphaerica)
ttcagccaatcagagactttctcgacgtttttcgtgacttttttacatga atccgctAATAGGAAACACGTGTATTCAAATCGAATGAGTTGCGAAGAAG GAAGGCGGCAATGGCGATGAGAGGAGAATTTGGCACGCCCAATTAAAAGA GGTATTTTTATCATGTAATTTGTtgagttttgacttttttcttatttacg ATGTTTTTGCAGTACgtgtaatttttatttttcacttttcattgagattt tctttcattttgagGTAATTCTTTGGTGACTCAAAGTTCTTGCCCCATAC CATTTGCATTGCCAGTCTGTATCAGTTTTTTGATACACCATTTTAACTTT CCCTCTTATATGATTTCGTGAAACAACTGTTCACAAGCAATGCCTAACAG TTCGCAAACAATCAATAGGAATTCTAGGCCCACATCATGATCTAAAAGGA AACTCTTGCCTTGGCATGGCGGTGCACTAAACTGTGTTTTGGTTGGAAAC TCTCTCTCTGTTTGACTTTTGAGTCACTGAGTGGGAAAGCCTAAGTTATA ACCCCCAAAGTGTGATtccacttttttcttttttaattcgCTATCCTTCC TTGTAGTACCCTAGCTTTGATAAATGTCGACATACCTTGTTGTCAAGTAG TATCTGGTATGATGCAAAGTACTAGAAGACCCTGTCGACGCActggactg tccggtgtatttgtccggtggcaaaaagtatcctttcgctacaccggatg CAATaagttgcatacagggaattttggacgccggacatttatgaaacaaa aaattaagaaacataggacgcaccggactggtcatgtccggtgttttgat tgtccggtgggaaaaaatatccttctccgacaccggacatccgactccct taagtccggtgtagaaattgtccggtggtaaaaaaaatactcattttaca ccggactttcgtgtgtccggtgttcgttaagtccggtgcgtcggcagggt cctagtACTAGCACtacaggccatattttagaaaggcaaggcagcgttcg ttggtggccaaaaagggcactttttcttatgtttttccactaaaaaggct gtttttaacaaaattttagtaatttcaagagGGGCAGCGTCCAATAACCG GACgcttaaagggcatgaaaaatggcctgcaCTAGTAGGttgagtgattt ttttaaacagcttatTCAGAATGTTTTATAAACATTTCaaagaccagata gttgctttgatggaattagacaaggtacGTCGGCATCACACAAAGTTACA GACATATCTATTTGGGGAGGACCCTCCCGGCCCTCCGGGAAACTTCCGGT GCTTCCGGAGCGAGTGATTCTTAACACAGTTCCAGAGTTCCGGTGCAGAC CAATTGCCGAAAATCATGCTCTGGAACACCAGAAGTGCTTGGAGCACAAA AAACAGCACTTTTTGCTCCAGACGTTTCCAGAGCGCCAAGAGGGTCCTAT TTAGGGACGTACAGCAGGATATCGATACATCAGTATTGACCTTTTTTAGA TCAGTATATACATCAGTatagggagaaaaaaaatccgtaaTTGGTATTTC TGGAGCATCACTGTATTGGTAAAAGACCCTTTTTATGTCagtatttcaat atttttggtcaGCTATCAGTATCATGTGGAATTATTCAAGAAATCAAGTT ttcatcattgaaatttttaaaagaaacaaGGGGAAGGGAGTCTAAGAAAT CTGAATATAAATGTTggttcaaaatattgaaatcgaTCAGTAttggtacc gtcaactgctccaactggggacgagtgtacgcaacatgggacttgttgat atatatatatggcctgtattttcacttaagggggtagtcatatgagattt tgaaaattggtgaaaaatttatcaatNggcctgtattttcacttaagggg gtagtcatatgagattttgaaaattggtgaaaaatttatcaatttcggga tttaaggctttttagtatcctttatccTTTCTGAacataccctgaaaatt tcaaggccgtagcATAAATATCTGCCGATATATTGGGTTTCTTATGAGAC CTGGTTTACAATTTTCTCCTTAGCAACGGGAAATCGCATCCGTTGCTAGG GCCTCATTTCCGTATGGCTGCTCTAAACATAGCATCATGACATANttgtt gaaatggtcaaacaccggaccccacgggttgagtgagcagagaatttgct gaaacacatcaaaggtaatcaaaggtAGGTAATGATCCCAACCTTGCTAT TATTCCCATCgctaaaaagggtgtcgaaattagaagagggatgtcgacat tagacagTCAGGGACAGTCGCCTTNTCTTTTTGAGacgcttttgttcaga agacaatttcttacttctgattggttcttatggattattagaattgtgat tgattccaccggtggatttttctgaaaatcaccatatatggaatcaattt tttgtgctctttccattgGGAGCAATCAAATCATGCGCAGTTTGCTCGTT CACAAGATAATTATacccgtctcctgattaggagacgtgaacctcctgat taggagacgggtcccTGACTGTTAGACCAACTTCTTACGGTACCAAACTA TTTTAAACTCAATTACCAAACAcaaacaaaataccaaaatgtacaaagaa aaatttcttagttCTTNTAGCCCCCCCCCCAAGAGCCAGGGGGGTTGCAT TCCATATGACCCCCCTACTTCAGTTTTTTGGATGGTGTCATCCTCCCTTA AAATACCCCCCTTCTTCAAAGTAGACTAGACAGGAGAATTCATTTCACAT GATGGATCTCCAGCCAGGCTAGATCCAAGAAAATATGAAGAATGAAAATG TGTCAGAGGGGTTGGAACTGTCTTTCGCCCTAAGTTAGTCTGTTACTAGC CCAAAGAAAGTGAAATAAACTGCTTCATAAAATTTCAGTGTACTAGCTGA GGCAACTTTCAGTCCAATGTtcactttccaacagaaaaagTTGGTTTGTT TGTTTGGTTTTATATACCTGCAAGCTAGCGTCCAAAAATGACAGGTCGAT GCTCATGCTTTTTACATGTGTCGGGCGGTATAAGAAATTGTGAAATCGAA CAGAGATATCTCACTTGCTTTGAAAGGGCGCTTTTTACTTGTTTTGGCTA TTTGTCTCTACTAAACTCACTTGTCTTCCCGTTCGATCATTAGAATTGAA AATGAACAAGCGAGTCTTTGCTTGGCAATTTGTTAACTTACCGCTGACCA GACGCGAAATTTCATCGCGGATTCCTTAAATTCAAATCGAATGAGTTGCG AAGAAGGAAGGCGGCAATGGCGATGAGAGGAGAATTTGGCACGCCCAATT AAAAGAGGTATTTTTATCATGTAATTTGTtgagttttgacttttttctta tttacgATGTTTTTGCAGTACGtgtattctttatttttcacttttcattg agattttctttcattttgagGTAATTCTTTGGTGACTCAAAGTTCTTGCC CCATGCCATTTGCATTGCCAGTCNTGAGGTAATTCTTTGGTGACTCAAAG TTCTTGCCCCATACCATTTGCATTGCCAGTCTGTATCAGTTTTTTGATAC ACCATTTTAACTTTCCCTCTTATATGATTTCGTGAAACAACTGTTCACAA GCAATGCCTAACAGTTCGCAAATAATCAATAGGAATTCTAGGCCCACATC ATGATCTAAAAGGAAACTCTTGCCTTGGCATGGCGGTGCACTAAACTGTG TTTCGGTTGGAAACTCTCTCTCTGTTTGACTTTTGAGTCACTGAGTGGGA AAGCCTAAGTTATAACCCCCAAAGTGTGATtccacttttttcttttttaa ttcgCTATCCTTCCTTGTAGTACCCTAGCTTTGATAAATGTCGACATACC TTGTTGTCAAGTAGTATCTGGTATGATGCAAAGTACTAGAAGACCCTGTC GACGCActggactgtccggtgtatttgtccggtggcaaaaagtatccttt cgctacaccggatgCAATAaatccggtgttgcatacagggaattttggac gccggacatttatgaaacaaaaaattaagaaacataggacgcaccggact ggtcatgtccggtgttttgattgtccggtgggaaaaaatatccttctccg acaccggacatccgactcccttaagtccggtgtagaaattgtccagtggt aaaaaaaattctcattttacaccggactttcgtgtgtccggtgttcgtta agtccggtgcgtcggcagggtcctagtACTAGCACtacaggccatatttt agaaaggcaaggcagcgttcgttggtggccaaaaagggcactttttctta tgtttttccactaaaaaggctgtttttaacaaaattttagtaatttcaag agGGGCAGCGTCCAATAACCGGACgcttaaagggcatgaaaaatggcctg caCTAGTAGGTTGAGTGATTTTTTTAACCAGCTTATTCAGAATGTTTTAT AAACATTTCaaagaccagatagttgctttgaaggaattagacaaggtacG TCGGCATCACACAAAGTTACAGACATATCTATTTGGGGAGGACCCTCCCG GCCCTCCGGGAAACTTCCGGTGCTTCCGGAGCGAGTGATTCTTAACACAG TTCCAGAGTTCCGGTGCAGACCAATTGCCGAAAATCGTGCTCTGGAACAC CAGAAGTGCTTGGAGCACAAAAAAACAGCACTTTTTGCTCCAGACGTTTC CAGAGCGCCGAGAGGGTCCTATTTAGGGACGTACAGCAGGATATCGATAC ATCAGTATTGACCTTTTTTAGATCAGTACATCAGTATAgggagaaaaaaa tccgtaATTGGTATTTCTGGAGCATCACTGTATTGGTAAAAGACCCTTTT TATGTCagtatttcaatatttttggtcaGCTATCAGTATCATGTGGAATT ATTCAAGAAATCAAGTTttcatcattgaaatttttaaaagaaacaaGGGG AAGGGAGTCTAAGAAATCTGAATATAAATGTTggttcaaaatattgaaat cgaTCAGTAttggtaccgtcaactgctccaactggggacgagtgtacgca acatgggacttgttgatatatatatatatggcctgtattttcacttaagG TTAAATccctttgacaacaaatttgttttgataactccaccaagtttatc aatcatactttctgtcataacatgtcacgataactttcactgatagcgcg ccctttttaacttttgttttcatttaaaatgaccagACGCcaaatggaga attagagaacgcctaCCGCCCGATGagattaacaaatagcgagtCTGTAA CTTGTCGCGCGAGTGATGTCAAACGCTCACATTCgcatgtgttccactac ggatttttttcatatttcgatttaaaagcctactcggtgcaaaagagaaa ttgtgtattttttaatacgcggttcatttaactgaaatcaaatgactttg gaggttcggtgaaatggtggtggaatggccgtcccatgttccgtaagata gtcccaagtttgAGCAGTTGGCGGTATATCAGTAATTGGGGAAAAAAGAT CGGtatataccgtaacttggtctaatgtcgacatcattcctctaattccg acaccctttttatcaggggccgtccacatagtacgtacgtaCTAAATCGT TTGGTTCAGACCTtcatttcatacatgaaactcaatgtttattaagaaac tttttcttttccttgatgccaACAAAAGTCAACAagtcaacaaaaaaaac aagcaaaaaagggctatgaaaaaatCTCTCTGcatacgtacattttcctt tgacccctcccctccccctgtacgcaaacatacacttttgagaagacccc ctcccctctttagtgcgtacgtactatgtggacggaccccagctgaaatt gatagaaaggttgaaactgtttttctttgcttagtggtcagagaggaata ctcctttttcaatcagtcaTTCAAGCTTTCAtgttattcctgtctctaaa gaatggtgtcgatattagaccaattTGCGGTAGGTATTCCCATACTCCCG TACTCCCCCACTAGTTgccaatttttaaatttctgaaTGAGAGACAAGGT GCGAGCGCAAAATTGAGTTAGGGATTTTTAATGGGTATTCGCTCTGAGCG AATTGCTCTGGTGAGATTCCCTTAAAAAGTATGCAAAagatatgcaaaaa gaaagtattgatataaaatttacatgcataattggcattatattaaagtg taatcttgtagaagatagattaaatttgcttctcttgaaaactaaaaata attatattcgctcatctcctagaacaagcacttcaaaaaaccataaattg gacataaactcaagctgaaaaatcaccagcgaaggtacaaaaataatcct tattcggctgacggtaaattattctcctgggaatagaaccgccaaatgat caaTTTATTGATCTGAACCCCTGATTTACAGCGGCTTTTACTAATGTGTT GGGTTTGACCTTGTATATCTAAACAGGGGTTTTAATATTTCTTGCACGGG Taagaatgtgtgacgtcataattactgctttcagtttgtgtattttgaaa gtttgatttgtgtactccgtctttgtggaattttttaatggcatgaaaac agaatatgcttcAATGTCtttaaagaacaaatataatatttctttttgga ttaagaaattccatgttttatttattgttctaatgattataataatattt atttataagatgctttgttgtctttttaatctttgtgtaaacttgcgaCC CCGTCTCTTTTGCTTTGGGGTTTCATAAGAGTGTCTCTTAtgttttgcta gcaacttgcgaattgaggtggagtctggatggcttcgcaacccttataca atacggctggtatcaccatctgaagtattcttatgTTTTTATGTGCTACC AGACCTCACTAGGAAATTGTTTTATATAGGACAGTCAAAGGAATGGGCGA AACTTTACTCTTGGtgaaaaaacttaatttttggaTGTATTATTCAAAGT GTTACCTTTAAACCCAAGTTTAATTTAACATCacattcttttttgaattt ttatgaaaatatcaGAAGGGTATTTATATTTCGGTTTTTGCTGCAACTTT ACTGATTTTTATAGAAAGGAGCTCTCAATTTAGCAAATTCTGCAAAAAGA GTATAAGCAGACCAACAATTGACTCAAAAAGTTTGTCTTAGGGGAGACTT TATCTTGTTACAACACCCTTTCTACTGGAAAATTacttttaacatatttt ttttggCTATAACTATACAGCACTGTCATGTATTTtactgattttacaaa atggtCCATAACACTATTTTCAAATTCACTTATTGTTTCACTTATGACTT GTTTCACTTGTCCCCACTTGAGACAAAAACAGGGGACAAACTTTGTAATC CTtaacttcttttcctttttaACTTTCTTGTCTTTTATCATCTTCAAGTG ATCTGTCTTCATTCTTCCCCCATTGTTTGTGTTACATAAGACCATAATAA AAGATCTTGTTTAAGATGTTTTAACAATTTCtatatttgtttttatgaaT ATTTTGTACTGACTTTTTGTTTCTGAGCTTTCCTATATCTTGTTTTCAAA CTAAATATTCAGAAGGATCagtgttttaaattttgtttgagaaaaattgg ttttataactttttgattttccaaTGACAACAAATTTTGTCCTGCCAATG AATGGGATTTTTGACTCTAACTCATCCAAGGGGTCTTGTGACAAATCTCA AGGCCTTTCCTGGCCTTTCATTGGTATTGATTGCTCTAAGTGGTTACAAA ATTGACAGAAACTCAACTTCTAATCTGAAAAATGGCCAGTGGCAAAAgtg cttgttttgatttttgatttttaagtacatctatccgcagacacgtgttt cgtccttcccaggaGTCATCAGTGCGGCTTGGGTAAGCAAGCATAGACTG ATGTTGTTACCAGAGTGATTTTTAAAGTACTACAGTAATGCAGTTTACAT AAGCTTGCAtccttttaaaatcaattttttttatttttcagagatTACTA TTGTTTTTATACTACTGACACATACAATAAATTGTAACCATGGGGAAGAt gctatcaaaaatctttggtAACAAAGAGATGAGGATATTGATGCTTGGTC TCGATGCTGCAGGAAAAACTAGTAAGCCTCATTCTTCTACATTTCCATAA CAGCAGATCATCAACACTCTTAAAAGTGACTGTCATTGAGCTCTACTCCG CCCTTCTAGAGTACATATGTCCTGAAAAGTGGATGTGCTTTTAGTATAAT GAAAGTTATGTATAAGATGAGGCCTTTTTCAACAACCTCTATCTTACATA TACATCTTATTATTCATTTTCAtatactttgaaaaaaaatcattttaaaa gttgTCCTGACAGGTttattccaaattttttttgctttataagTATTAAA TCACCCTTTTGTTATTTTATAGCTATATTATACAAATTGAAATTGGGACA GTCAGTGACAACNACCCTATTGTTATTTTATAGCTATATTATACAAATTG AAATTGGGACAGTCAGTGACAACAATACCAACTGTAGGATTTAACGTAGA AACAGTTACatataaaaatgtcaaattcaacGTCTGGGTAAGATCTAGTT TTTTAGTCATAACATGTAGATATAACCTGTATTGATGGTAATCTAAACAT AAAGTAAAATGAAGAGCGAATAAAGCTTGTTTTCTGTCTTAACAAGTAAT GATGTTCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053107TCONS_00053107Clytia hemisphaericatranscript
TCONS_00053108TCONS_00053108Clytia hemisphaericatranscript
TCONS_00053109TCONS_00053109Clytia hemisphaericatranscript
TCONS_00053110TCONS_00053110Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_226supercontigscaffold_226:157661..166571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.39 81.68 75.21 71.66 356.64 314.8 232.41 293.63 126.58 132.72 77.35 69.58 75.73 64.15 63.23 67.55 104.51 93.13 49.73 72.99 98.32 86.2 85.76 94.45 84.83 112.93 114.56 104.4 84.77 104.66