XLOC_033647 (gene) - C. hemisphaerica

Overview
NameXLOC_033647
Unique NameXLOC_033647
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:582782..591635+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033647 ID=XLOC_033647|Name=XLOC_033647|organism=Clytia hemisphaerica|type=gene|length=8854bp|location=Sequence derived from alignment at scaffold_228:582782..591635+ (Clytia hemisphaerica)
CGAGCGTGCGGTTATTATaagggaaaaagaaaaatccatTTTATTTTTGG GTTGATGATACAATATTTTGTCCACAGTCGGGAAAACCACAAAATTggtt ttagttgtttttttaaattgcaATTGTAACGAATGATTGTTGACTTATTA TTATCACTTTTTTATAGCACACTTGTTATATAATTAACTAATAGACAGAA TACACAAAACTTTTATAAAGATGGTGGATTCCACTGAAGTCAGCCACGAG GAGAGATCCGCTTCACCGGTTCATCGTGATACAGTTGATGGTTCGCAAGA AACTGTTGTTGAAGATAATATTGAAAAACCTGGCAAAGATCAATTTTTCA ATGGTTTAGAGACGCTTGAGGTTGACAACATCTTAGATTTCCGTAATGAG CAGGTAAGAACTTTTTATAATTCTCCTCATTTTCTTGCGTTATGCCCGGT AAGTTGAGATGTCCGGATTTTTAAAGTTGTCGGGAAGGGTGGGAATACAA AGGGGGTTTTCTAAAGGAACTTTGTTATTATTATAAAGAATGGCATACTT GCACTGATAATTTcgaatacacgttgtttttttttattagaacctagttt attagaacatttaggctgaaatttgtcgaaaaattaagaacatcgtaaga acatgcccggaaaaaaatgacaagaaactatatttttttactcttttcaa gcagttttaaccgaacttagggatggatcttctaaatcgagagtcaaata ttgtccaaattttaagtgctctttattttgcatgatattgtcgatttaga gtagtttgaaaaattaagagcgcgtttaagaacattttaggctgaaaatc gctaaaaaataagcacatccaggctcagccaaatgttaagtgttctaata aaaaaaacacggttttacaaacaaattttggacttgtttaaaggttttgt ttttgtttttaaataagagtgaatGCTTGCTGGATGGTCCAATAAGATCA GCAATTTCCTTCCATTTGAACCCTATTGTTTTTAGTGCAAGGACTTGGTC TTCGTTGATATCTTTCAATGGTCTGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacgaagat agtatgtttttaaaaaaagatagtatgttttaaacgaagatagtattgtt ttaaaaagatagtatttatttccgctttggcgcgccatagatgtggagca agattggtcagaaagaggaaaagaaaaacatttttttgctaatATCAGCA CAATACATATACCAATTGGCGGAccacactgtcctgatatgaaatatgtg tctgataacgggaacacttatgtaaaaataaaacctttactTAATTCAAT TAAATCAAGCAATCCACGGTTCCTGAATTTGCTTTGTAAACACCACCGTA TCACAGACCTGGTAGGTTTCCCTCCCAACATAAGCATTGAGAACTTTTAA ATGCCTCGGGCCTTCATTAAATGTTTTGGTTTTAGGAGGGCTGTTTATTC gaaggggcgtttaaaagaaagggtcattcaagttttgaaaaattttatcg gGTTAATAATACAAGGGTGTTAGTGAAAATTTCGATTAATTCCTGTCCAA GTTTCGATTAGGTTCCGGAAGGCaagacacgttttttataagaacatcca aaatttttgaagcctttggatattcttattttcatattCGTGAGTGTTTT TGTCCATcgtcctaagaaatcgggtgttaaAGAGTTCGCATAGCCtttaa ttgttcttaatttgcttttagtatttttttcattaaaacccTTTCTTTAA CTGccgttcgtattttttaaggttcgacctatttgtcatggaaaaaaata aaggttcgacctatttgccagatgtcggcatatgccgacaagAGCGACCA CAGAGCTTAGCATCACATTTAGCTTTATTTTCTggaaaatatcagaaata tttAAGTGATATGTGTTTACTTTGAGTTGAAATATGTATattatgaaaaa catctttaaaatatattttgattattCAACTGCGCTATTTAATGAAATCT AGTTCAGAATCGAACTttcaataaacttaaaaaaactgtggcaaagaaat ggaaaatgCTAATGTCGGCAACTGCCGACATTGGAAACGAATCGAAAATG CTcttgtcggcatatgccgacagcGGCACTAATAGGGTGAAACCCTGATG TTTctatttagtttgttcttataaaaaagtgtatctaTTTGATGTTGTAA GCTTCAAgtttttcatccttagttttcgGATGACGGTTCACTTTCAATTT TGGAATCCATAAACTTTTTAGTTTAGTAACTCTAATATATTCTAATGTTT TCAGGACTGTAGACAATACCTGGTGTCTTTCAAAAGTTGGATAGCAGAAG AATACTTGCAAGATTACAACGAGCTACTCATCAAATTTTGGAAACAAAAA GATGAAGAACAACTCcaggtttgaatttttttttttttttcaacatccAC TAAgacttcattttttataagaataattttatgaACACAATAAGGCTCGA AAACGACCTTTGAAACAACATTGTCTCCTCTCCGATAAGTACGCCATTgc tctaaattgcttgaaaaaactTCCTCAAACTGACTTTTGGAATTTCTGAG TTATAATCATGGGCATCTCTTAAAGACCTTAAAGACCTAAGGAATAAAAT AAATCTTCGTTCCTGTTAAGGTTTTATTTTCTAagttgtttgcttttttt tcaaattacacattattttataagaacatcaaaaaaatttaaaccttcgg atgttttaactttttgagttttaagcctaaaagtcttcttaaaatgttct tattttaaccattttttaaacatttttgtcaattttcctaagaaattagg tgttttttagagtctgcaaagcctttaaatgttcttaacttgttcttaac attttagccaccgaagccttatgttcttatatagtttttcttataaaaag aaacatgtagatcTAGCCAATAAATAAATCTTGCGccttcaaaaaaaaac taaccAGGAAAATGGGTTAAGTTTCATATTCCACCTAACATACAGGGTAA AATTGTGGTACCAGGGCAAATAATAAATTATGTTTAATGGTTTGTTTGAC TTGTTGAACAAAAtgcaaataaaatattttttcctagatttttgCTATCC AGTTAATATTTGAGCCTGCTGTGTCTATTTGGTATTATTTGGTTTGAAAC TGAATAACATTTCGTAACTTTTATaacagaaaatgaaataccttCTAGGG AACtccaaaattaacaaaatagcTTATCTCGCCAAACTAATTTCCTATCA ATTTTAAATTCCTTAATAGTGCCCTTAATAGTTTGAGAGCTGTTGGCCTT TTTTATTACGTCATATGCCTCAGAATTTTAACCATTATGAACGTGTTGTT TTGAGACTAATGACTTAATAAAAACGCCAAGAGCTCTTAAACTATTAAAG AATTTTGCTGCTCgtcaaaatcaataaagttttgTTGTTTATTTAGAACG GTAATGTGCCAAAGGACATACCATCAAAAGACAAAAGATCCCCTCAAACA CATTTCGCGATCCAAGAAGATGCTAGTACCGAGTCCTCTTCGTCAATAAA TATCGATAATCAAAGCTTATCCACCGAAACAGTCGATGTTGAACGCACTT ATGAATCAGAAGGTATGtacaaatttttgaagccttcgggcgctcttaac tttttgagttttaagcctaaaaatgttcttcacatgttcttatttttcaa aatcaagaccattttgtgaatatttttgaccatttttctaagaaataggg tgtttttgagtctacaaagccttaaaatgttctaaacataTTCTtaacat agtttgttcttataaaaaaacgtgtatccgtTTTAGATAGCACACAACTT CTAAACGTTCATATGACGTTAAGacgaatgttgaaacaacgttgtgtgtc aactGGGGAAATTAAAATAGCCAATCCTCATCCAAAACTTACCTGCACCT accagttcttataaaagatgttGGTTTTTCTCAACAAAGTATTTGTATGT AGTAGCTGCTAAGTTATGCAACACTCGTCTCAAGACCTAAGACATACGGT TATTACCAGTGATAATGTGATAAAATAGCTAAAAATTTTGATCCATAGCG CGGTCTAGTGATTTGCCAATATAGTAAGTCTAGTAACACTAAAATTTCCa aggtaaaaaaattgaagcaGTCGCAACTTTTGAGTTGGTCTACTTTATAT TTTGCTTTGCTACGATATTCCAaacttttgattgattttccTATCTAGAA CTTCTACCACCGTCTTTCAACCGTTTGGAACGGAAACCAATGACAGGTGG TATCCAGGCTACAGAGCTGCCTAGACTGGATTCGTCTGAAGACACAAGCT ATGAATGGACGTTGGAGAAGGAAAATCATAACGTTGTgcacaagaaaaga aaattgaaatcgtTAGATGACATTGTGCGGAAGattaccaagcaaaatga tcAGGTCATTCACCCTGCTGTAACTGAAGATGGTTTGGATGTGATGAGAG GTTATCAAGGACATGTGAATTTTGAAGAGAGTGTGACCAGTGAACAGAAA CATGTGGATGAGGAGACCAAAAGAGGTATGTTAATCCCTGGactctaatt aaaaaaaattaacaggCAGTGACTATaaccacagatttataaagacCGAA AGGCTGGATGTCGtactttaagccatcgcaggcaaaaaaaattgaatatt ggaaaaaatattgttgctattgttttcaaaaacccgcgaagcttctgatt ggtcaagcgcaaatgtaggatttcctacctaaccacggcacacttttcag ctaaagtacgccatctagcccttcgggctttataaatctatgactATAAC ATATTTTCCTTGTTATTAAAACAGattgaaaaatgtatttttatcatttt ggatTTGATTAGACCCCATTAAGGATCATTATGTAAGCTATTACCACAAG GCCTTAATCAttaattgaagtttttcacGTATTGTATGCACAAAGCTCTC AAACCTGCAAAAGAAAATCAACCgctttgaaattaatttttcaatttaaa tgaattcttttttataagaacaagttcTAAGGctaaaaattgcccaaaaa atattttgaagaaatAACATAATTTAAGCAAATTCAGGGTTAAAGTTGTG ACCCTAAAATTAATaacagaataaaaaaaatgacacTCGAAGTGCCAAGC CTAAAAAAATTACTGATAAGAAAGTGTAAAATATCGAAGAAACTCATACA TGTTTATGCTTTTACTTTTAGGATCTCTGAAAACAGTATCACCAGAATTG CTAAATGGAAAAGCAGAAACAATCGGCGAAAGTCAACTCACAAATGGAAA ACATTCTCCATCGAACGCTCATCAAGAAGAACAAAGCCCTAGAAAAACAC AACAAACGCCTGCAGTAAAATCAAGACAACGCTACCATAAATGTCGATAC TGCTCAACGTTATATTCTGACCCTGCATTGTTAGAACGTCACGAGAACAG TCATTTTGGTAGGGCCATAGCTCCAGCTCCCCCACCCTTGGTCCCTGTCA CAGACGAGAAAGATGCATACAGCCGACACCCTCATTATGGTAAGAACCAT CGCAAGGAAGACGAATCCATGATCAGGAAACCGATTCGGAATTTACTATC CCGAATGTGTAGTAATCCGGAATCAATGAATCAAGAATTATTGCTTCAAA AAGCACGTCGCAATATTGATATCATTTGTCCCTTGTGTAAAGTGAAGTTT AATAAAGTGTTACATTTTCAACAGCACTTTCGTATCAGTCATCCGAACAC TGTTAATTTCATTTGTAAAGGATGTCATATTGTTTTCTTATCGAATGAAG AATTTGAGAATCATGATTGCACTCATGTGGTGACACGTGGTGGCTACAGT ACACCTTGTCAGAGAGTTGATTCAACTGAATTTCAACATAATGACCGCGC TATACAACCACAACATCATCAATACCGTTGTAACCTTTGCTCAAGAACTT TCAATAATCGATATCATTTGAATGAGCATTTGGAAGACCATAATGATGGA TCACCTCCTGTATGTCAAATATGTGGCAAATATTTCGAGAGGATGGACTC GTTGAATTCGCATATCATTGAACATCACGCCGAAATGCGACGAGTCAACG ACCGAGCATTCAACGGTAACCGATCACCATGCGCCTCTGTAACCATGGGT AACGAACCGCGCATGTGCAGTAAACATGGTTCCCAACATACGTCACCGAG AAATTCAGAACAAAGCCCGTCCCGCTCGTCAAGCGCTTCGTACGATAGTA ATGAGCAACAACCATACGAGCCCGTCCGAATGATACCGACTTCACGACAT CATAACGAAAATAAACCTTCGTACCCTTATGATCAAAACAAACCGATAAC CAAACAACGATTTCCTGAAGAAGACTATTATCACCCTCGAAGCCTACCCA AAGAACAAAGCCATATAAAACCTGACCCCTTCATGCAATTAGTACCAAGT CCCGCCCAACAACCGCCACAAAACGCCATCAAAGTATCAACGCCCCGTGG TGGTGGTACACCTTTCAATCAACAAAACGGTGATCCATCAGTTTTAATAT GTTCTAAATGTGGTGAAAACTTTTCTTCACCTTCTCTATACGACATCCAT ATGCAATCTCATAAAGAACTTTTCGAATGTGAAAAATGCCATAAGACATT CTCAGTAAGGAGTCAATACGATTTTCACATGCAATCCCATGAGAATAGCA AATCACACAAATGTCCTTATTGTCACCGTTCATTTTCCATGAAAGGTAAT CTTCGAAGACACATTCGAATTCATACCAATGAAGCACCTTACGAATGTCC AATCTGTTTTCAAAGGTTCAGAAGATCAGATGGTCTTAAAGGACATATCA AACGGCACGAAACACTCGGTGAAAGTGCTCCAACAGACTTACTACCTTCT CAAGCATCTTAAACAGATAAAAGATATGAGACGTTAtaatcaaaaattac aaagattTCGGATCTTCTAGtttctattattttttaaataaatctttGGT TATTTTAGTGTTGCATTctattttgagatttcttcgaAACCATTAAAGTG CTATTGCTATTTTCAGCAAATACTCGATAGTAAAGCCTTGTTTTGGGCTT AAGGTACTCTTTGATTTAAAGTAGTTTTGTGCTTGATTTCAAGAGCAAAT TATTTTTTGAGTaatatttttagaaagatttttatGAAGTGAGTACgtgt aaaatattattttttgtatatattGCTAAGAACGTATACAATGGAAAATA TTACATTCTACAATGATATTCTTggagaaaaattatgaaaaattatcaGT AGTGTTGTAACATAACCCTTCCTGTCATTGGGTATGGGCTGTAACCTTGG ATTGAAACCATCTTTTGTTCGAAATTGAcagaaatgtgatttttttaaga tttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053309TCONS_00053309Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053309-proteinTCONS_00053309-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:582782..591635 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.45 0.34 0.34 0.36 10.92 10.07 23.19 25.6 8.14 6.94 7.36 5.84 16.76 16.76 13.78 21.54 25.64 25.8 3.55 3 17.35 18.25 7.13 8.4 15.54 19.75 1.65 0.77 0.75 1.04