XLOC_033651 (gene) - C. hemisphaerica

Overview
NameXLOC_033651
Unique NameXLOC_033651
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:170593..173480-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033651 ID=XLOC_033651|Name=XLOC_033651|organism=Clytia hemisphaerica|type=gene|length=2888bp|location=Sequence derived from alignment at scaffold_228:170593..173480- (Clytia hemisphaerica)
AAATAAATGGGGGCGTGATAGGCCCGTGAATATTATTAGCGCATAATTTT
TGACTCGTGTTACGACGGTTTTTTACTCTTTTACAAGTTCTAAACATGAA
TGGAATAAATCTAAAAAGTTTAACATCAGAGGAAAGATCTCTCCAAAGAC
CAATATCAAGAATAAGTCGAAACAGTGGAGTGTGGTTGCAAGGGAAAAAT
ACTGAAAAACAGTGAGTGCTTTTGTAATGCTGATGGATTTTTCGTTCGAT
ATATCTAGCATATAGTTTGATAATATTTGATCATATATCCTAGATCATGA
TTATCGCAACGCGTCCGCAACTGCTCGAGTCCCTGAGTCGTGAGTCTACA
TGCTTTAAAGCATACAATCATGTTTCAGCAACTCATAAGGACAATTCATA
TAGGGGGTAGTCCCAGTAGTCACAACCCTTACAGACACTTTTTTAAACCT
TTTTGTTGTTTCTAGGACATTTGACAATTTATAGGAGGGACATTTGAGTG
CTGGAGCGCTTAGTCGAAGTGTAAGGCATTCAAATTTTCCAGAATCTTTG
AGGAAAACCTTGACGAAATTTTTGTAAGTGGAATTTAGAGACTATTGTAT
ATAGAGGAATGTTAAGAGATGAAAAAAAAACAGCTTTCTGATTACTCAAA
GTTCAACAATCACTTATATTGAAAATTCTATTGATATTGTAAAAACGTTG
GTTAGGTCATTAAATGAAAGTCCAGAAAAGATAATCTGAGATCAGATTGT
GATTGTTTTTTGCACACCACGCTGAAGCTCTTTGACTCTAAAGGGATGTG
TGAAAACAAAAAAAATCTGACGAATATACCATCTCAAAATCGTAAGGACC
GCGTTTGTCTAAAAGGACTAGGAATGACGACAAAGTTGCGTGATTGTGTT
TATGAATAGGACGCCGTATCAGTTTTTGACTTTCCGGCGCACAACAAGAT
ACTTGTTATAGATTTTTTCGCGGGAAGACTATTTTACTCAGATGTTTAAT
GTACCTTTAATTTTCAAGCGCCTTCAGAGGTTTACAGTGCGCGTAAGAAA
AATTATCAGGTTACTTAAGAAAAGACGGCTCGCCATACAAAGGTCTACAA
ATCGGACGGTTTCTATATGATTTTACGATAAAAATGAAAATTTGTTTTTC
CTTTTTCGCCGATTACTAATTCAATTTTAAGAATAAGGAGCAATTTTTTT
ACCATGTATACCAAAAGAAATTCTTAACGCAATGAATTGATTCTTAGATT
TTTTAAAGCGATAACAAAAGAAACCTATTCAAAACCAAATTCCCTTGAGA
GACAGACCTGACTATATGGCGAGCCTTATTCCATTGTTTTAAAGAAACTG
TTTTTCCATCTCTTTAAATTCCTCTTTTTATATGTTCATGATAAAATCGA
ATGCAATGTTTCGCTGCAGGGGAAAGAATCCTAATCGTACAAAGAATCCG
ATGAATCGAGGATCAGCTTCTTCTATCTCGCTAATAACATAATCTGGATT
GTATCGTCTTATATCATAAATTTGTTTGATTTCATAGGAAATTTGGAAGA
GATGATTATCACAGACTACTTGCAAAAGAGAAAGCACCGACCTCGCATGC
CACTTTGAAAGATAATACTATATTTAACGTATCCATCACCCGTCGTGAAA
ACGCTGAAACGAATGATTTTAACGATGCTATTGATCAATTGTCGAATTTG
AATACAAACAATACTACAGTTGAAGGAGAAAAATATAATTCCCTGGTGCA
AAGATCGGGAAGATCTTCTTATGGATTTAGAAATACCGAAGATGAAGACA
AATGGTTTCTCGAACCTGTTAACATGGAGGATAATTCAAGTGTTTGTTTG
GAGGATTTTGATAGTGCTGGCAACGTTGGTGAGCCTTTTGAAGAACTATG
CACCAAAGTTGAAAGAGCAAATGCTTATTGTTTGAGTGCTAAAATCTCTC
CTTACGAAGAAAAACTTTTTAGATTGAGACGTGAAAAATTGAAACTGGAA
GAAGCGTATTTATTGAAAAAGAAATGTGAGGAAGAACTGGAAAGAACTAG
ATTACCGAATGTCAAATGGTATGAGATGAAAAGTAAACAGTTTAATACAG
AAATGATGAAACACAATTCTTTAATGAGGAATGAAGTTGATTTATCAGAA
TTAACACAATACAGAGTAGATCTTTACAATAAATCGAAAAAATATGAACA
GTTTAAAATGAATCCTTAAATAATATGGTAATTTCTAGTCCCGGGGGAGG
CACTCAGGTAAAATTGGGAACGGGACGTGCTGCTGGTCAGGGTCCCTTTT
TTAGGCTCTAAAGTTATCTGACAGGGTCCCAAATTTACTAATTTTCAACA
TTCGTACCTGACAGGGTCGTCCCTTCCAACAGGGTCCCAAATTTTCCAAA
AATTCATACCTGACAGGGTCCACTTTTCAAACTCTAGCGGCATGTCATCC
CCGTCGGTCGTCAAGGTCAGTGCCCTCCCCCGGGTTTCTAGTGCAGGCTC
TTTTTTCCCTAAATTTTAAACAAATCATCTTCCAAAGAGGCTTTAAAAAC
AAGGACTTCTTTTTCATTTTTATCATTTCGAGGTTTATTCCTGGGACTTG
AGTTGAAAAAGGTTCCCTGACCCTATATAATTGTGCTTAAATACCTGACC
TATAAGTGTAAATAATTACACACTACATTTACGATGGTTAAAAATTGTAT
TATATTTTGAAAATTATTTTTATAGCCTGTTTTAAATTCTGATACAATAT
CTCGTATTTCTACTTCATGGTATTTTCTTCATAATGTCAAAAAGTTAGGT
AAAGTCGAAATAGGCGCGACATAATCTTCAACATTTCAATCAAACATCAT
CGATGTAGAAATGTTAACTATTTCTCGTCGTAATATCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053317TCONS_00053317Clytia hemisphaericatranscript
TCONS_00053316TCONS_00053316Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053317-proteinTCONS_00053317-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:170593..173480 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34	0.39	0.17	0.2	18.1	11.71	10.38	8.11	3.74	6.51	4.33	2.65	0.61	1.03	1.06	0.68	1.49	1.31	0.62	1.29	1.03	1.12	0.73	0.7	7.01	5.42	2.64	3.66	0.2	0.22