XLOC_033732 (gene) - C. hemisphaerica

Overview
NameXLOC_033732
Unique NameXLOC_033732
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_231:145611..153611+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033732 ID=XLOC_033732|Name=XLOC_033732|organism=Clytia hemisphaerica|type=gene|length=8001bp|location=Sequence derived from alignment at scaffold_231:145611..153611+ (Clytia hemisphaerica)
AAAGTTGGTGGTTCACAGTGACAGTCTGGTGCAGTGGTTATAAAAGTAAA
TTTCTACTCAATCCCGCGCGTTGTGTTTACTTCTAGCCAAGAATAATAAA
TCATAGAAAAATTCTACGCCTAAAAATATGGGCTGGGAGGTCTTTTACCA
AGGGAAGAAACGATTTGTTGATATGGCGGGAAATAGCATTAACGATTTTA
ATTGCAAAGTTTTACCTTTGATTTACCTTATAATTATTTTCCTTGGCCTT
TCTGTTaaataaaatgaagtaaaaaatccttcttcttaaaattttaaaaa
tacatcACAGATAAATCATTTAATATCGATGAAGAATCGATAAGAAAAAT
ATACTCTATTGTCCGAACATCTCATTTGCTTTCACTCATACCCAGGCTCC
CAAAATCGAAGAAGTAGATAAAATGGTTCTTTTTACTTGCTCATCGCTAA
CAGCCAGCACGTGTAAGTAAATTTCAGAttgtattttattattttgactC
ACCTAAAACTGTCTGGAAAACCATGGCAAACCTGTTAGAattcttatttt
aattttttaccaGATCACACATCAAGATGCAAAACGATAGCGGTGAAGTT
GTGGATCTCTACATCCCAAGAAAGTGGTAAGCATTGCCAGTTTTTTTTAG
AATGAAAGTTTGATTGAGGAAAATTTGTGCTAGTACAATNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNtatggaataactgcaagggtggtgg
tgtctgaagaaaatgtccaaaattgcagttactccacatagtgtcaagga
gtaactgcaagacccccccctgATTTTAATCAAAAGTCTTACTTTATAAT
ACTTTTGATATCAATATTCTattgcaataaatatttttacaaaacgGATA
CTTTTAATAGTGCTACAGAAAATTGATCCCatccaacacgaagcaaagtc
gatatgtCACCCtacgattttttttgaaattttcgtaCATATAACATATN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNCAATGACGAGAATCTTATCTGATATTTTGATGAATTCA
ATCGAGCTTTTTAAAACTGAGTACTAGTATAAAGACCTAGTAAGCTTCAA
ATCTAATATCCCAGACaaccgcgctcgataggatcgatcatcggaacggc
tcgatgacagattgatatgtgatcgatggattacttaacgatccggatag
gagaccgatagaggatcgatactgaagattttttcaagcttatgattagt
tatcgaatatttatcaatctatcattaatcttatcgaccctatcgactta
TGATCGATAACAAACCAGACCCCCGCGCTCGATAGGATCGATCATCGGAA
CGGctcgatgacggatcgatatgtgatcgatggattacttatcgatccgg
ataggagatcgatggaagattcggccattaaaaagtcttgagtatcgatc
tttggttgatccattatcgagctagtatttcaatcgagtatatcgattcg
tcatcgatcgttaattgattcgtcatcgatcgttaatcgattcgtcatcg
atcgttaattgattcgtcatcgatcgttaattgattcgtcatcgatcgtt
aatcgattcgtcattgatcgttaatcgattcgtcattgatcgttaatcga
gtatgcatcgattataaattgattatgcatcgattataaaattaattagc
agGTTGGGGACGCTTAttatattaggtacccgagagtaccatATCGGCCA
TTTTTAAGCCGGGCCCCTCCGCTTTTTTAAGTTCGGAGCTAGGgctcagg
cgaaattccgtaatctaaaccttccagcagATGTTGAAAGTTTCCCCGAC
CTTTTCCCAGAGCTTTCTTAGCGtgtcgaaagaaaatttctacatctgGT
GCCAGATAAGTACCGATAAGTAAATCCGGTTTGACGACATTAGATCGATA
TGGATCGattaatcaatataaaaaaacggtcgatattttgattggatcga
tagaggggtcgataggtaatcgataggtgtcgatagggaatcgataggtg
tcgataggtaatcgataggtgtcgatagggaatcgatagcgagaaagatc
gattaatattagagctcgctttttagaaagagtcgatagggtcgataaga
tcgataaaagatcgatgatagatcgataactaatcataagcttaaaaaaa
tcttgagtatcgatcctctatcgatctcctatccggatcgataagtaatc
catcgatcacatatcgatccgtcatcgagccgttccgatgatcgatccta
tcgagcgtgGGGTCTGGAACAAATCGATTaatgatcgatgacgaatcggt
atactcaattgaaatactagctcgataatggatcaacgaaggatcgatat
tcaagacttttttaTGGCTGAATTTTCCAttgatctcctatccggatcgt
taagtaatccatcgattacatatcgagccgttccgatgatcgatcctatc
gagcgcggacgtctggaatATCTTGTTCTTGCTGATCAAGTGCTTCCACT
ACTTGTGACCATTGACAGATTGAATTAAGCTTTGAAATGCTCTTTTAACA
GCACAGAACATTACCCTATATTTGATATAGGTGAGATTAATATCTTTGTT
TTACAAGAGAAATGTGTAAAGCCTGGTTTACATTTACTGTGGTTGTTATT
AAAGAGCGTGCGCCAATAGAGAAATTGGACGagctaaaaaaattatataa
gatATAAAGCAGAACCCCTTAAAAACCTCCTGCAGCTTTCTAGAAATTTG
AataaccccctggaaacctGAAATAACTTATGTCTGGCATAGAAAAACTC
TAAAGGTAAAGGGTCCTCAACTATAAACTGATATGCTTCAAACTCTCCCT
ATTTTAGCccaaatttttgaaacaaagtCTTACCTCTATATGGAAGTATG
CTGAACAGATCTCTGTCTAGAATTTTTCAGCTTAACAAAATAGGTGGTAA
TTATCTGGTTTTTCATGCACTGATGAATTGAAATATTCTGAATAACATGT
TGACTTGCATATCGAGCTTTTTAAACCTGAGCATGAATTAACTAATTTCA
CTTATGTGTGATACGGAATACGAGTGACATTTCAGTGAACCTGTATGTCa
agcttttttttttgcctACAGTCATTGGTTAATATTGAAAacaatgttta
tcaaatttaCAGTTTTATTATAGCTCAGCCACCAATACCTTGATCTCATC
AAAAGACCATGCTTCAGTTCAACTGTCTGTTGCTGAGGtaatttttgtta
ttattgaaattttgataacAGGTTAATGATGTTTAATTCTTCACTTTGAA
CTGATCCAATGTGATTGATATCTTTTCAACTCCTGAAACCTGTTCTTATT
TGAAATGGAACtacttttgttttatattttacttaaaaatataattcaaa
ctCAAAACATCTCTTTTAGGTTGACGATGAAGGCAGAATGACAGGTGGAT
TCAAAACCTTTGCATTTTCTGGCAAATTGAgatgtgctgtaagaatattt
aatGATTACAAAGTATTTTTATGGAATGGAAACTGATGATTAACTTGTTC
ATGCACCACTCAGACTTATGATGGTGATAAAAAGAACCATATAAGAATGA
AGTTTCTTCAGTTTTGTCATTTATCATTTGGATCACCATATTATGTTCTG
AAAGTTGTGATTAATTAGTTCATGCACCACTCATACTAATTTCGATTAGG
ATGGTGAAAAAAGAACATAATGAACTTTCTATATAATGCTTAATCGGGCA
AATTGTACTAAAAAATTTAAGtgagaatttatttttgactggAAATTACA
TTCTCTTACTTGAGCTAAATCTTGAGTTCTTCTATTGAAGTAGTATGACC
AGTGATGATTATTTACCTACATTGCCTGATATTACATGATTTCACACGTA
AATCTGAGGTCAATTCTATGTGTCTACTTACCTTAAGTGGCTTTATTTTT
ACTTTGATTAatttaggggtcactcacatatcgatttttcCCACGCTTAG
CGTCATTCCGACGCTAATAAAAAAACCCACCTACCCTTAGCGCCATATTA
TGAAATAAACCGAAATTCGATGGAAATCTTTTTACCTTTCTCACTTCAAG
TATTGATGTTCACTGCCCGAGAAGTTTCTTCCCCCCTTTTGTTGGTACAT
TTTGTAGTGGTTTCGGTATATGACTTAAGCACAGTTTGGTTCCCAGACCT
GCATAAGTTATGACGCAGGGGAAAAGCCCCAAACTTTTTAAACATCTAGC
GTCTCCGGCATTTTACTATATTTTACTCAAAAAACCAATATCTCTAGTTG
ATTTTCTTAGCGTTGCTCAATCTAACCCACCCACCCTATAGCATCGGAAT
GACGCTAAGCGTGGTAAAAATCAGTATGTGAGTGGTCCCTTAATAATTCG
ATTTGGAAATTATTAACTCTAATATTGAAGCTCCATTTTGCAAAACTTTA
AGAATAAATCATATTGTGAAAATTAGTCTACATATTCTAAAatttacaca
aaaattaattaattcaCTTAAAGCTAGTTACCAGATTCTCAAAAGTTTAG
GTACTATTTTGGAAATTATTggtttgaattgaaaattttatcatattttc
atttAGGCTGAATCTGATGATGCCCTCAATCATTTATGTCTCAAAGATGG
AATTTTCCCAAAGTAAGTTGATCAATGTTGTTAAATTCCCCCAATACAGT
CTGCAGTCCgttcatctgttgaaagaaTTGTAACCAATGTAAATGTATTA
CGAATCGTTTTACCTGCTTATTTCTTGTCCCAGGGTACCCTTACGATTCC
CAACtagttttagaaaaataaaattttaaagggacataaaagtaataaaa
tgtaaacattgcgcaaaccacgtgtcattaaagagaacaattaaaatcac
gtgttcaaaacaaacttgtaaaacaattgaacaatcaaaattagccatat
ttggtttgattctttattttgacatgtgacatttgttttgattttgtatc
cgctgcatacagtttgtttacaaatttcgcaagtactgtcaTGTTCCTTT
AAAGAAAACCTGGTTTACctcaatgggccattccattttatatcccaACA
TGGGGTAGATGAAcatttccagaaaatgtccCAGGTGTTAATTCATTTAT
TATTCGTTTATTTAAGGGATAAAGTGTTGCACTAAAATTTCCAGGTGTAA
AAGACTGGTTTTAGTTCATCCACCCTCGCTTAAAGGTGTGAAAAAATCTT
TCCGAGggtattttttgcaaactttgccgttttccagggggtatccacac
attttcaatactTTCCTTGACttaaaggttcgtccaccctcccccctgta
tggttttggAACAGCCCATGCCTTAATggttaaaatttatttattttttc
aggaacTACAACATGAACTAGAAGTGTACACCACACTGAATTGTACATAA
GGAAATAAACATCTCGACTACAATTATATTGCATTCATCTTTTGTTCTAC
CCAGATTTGGACATTTTTTGCCTGTATTGTTGTGTTGCAAAGGATTCTTA
ACTCTATTTGGCCTacggggctgtttctgttcggaggtcaaattattggt
aatacCTCCTGGAAATAGAGCTTTTTccatgaaattttttgaaaattcct
a
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053427TCONS_00053427Clytia hemisphaericatranscript
TCONS_00053428TCONS_00053428Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:145611..153611 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1610.55	1535.45	1807.02	1942.36	746.76	589.99	759.44	811.96	1634.42	1448.89	1649.58	2005.65	2578.17	2323.85	2220.11	2078.27	2359.47	2273.58	1606.88	1710.6	2190.45	2058.75	2287.22	2018.36	1057.05	1072.31	2414.51	2466.67	1535.69	1655.51