XLOC_033736 (gene) - C. hemisphaerica

Overview
NameXLOC_033736
Unique NameXLOC_033736
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_231:272140..274644+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033736 ID=XLOC_033736|Name=XLOC_033736|organism=Clytia hemisphaerica|type=gene|length=2505bp|location=Sequence derived from alignment at scaffold_231:272140..274644+ (Clytia hemisphaerica)
ATTTTCGTTCGCTTTCATTTCCTCTTTTCTTACATCGAGTGTCAGATACT TTTGATGCATTATTTCATTGAGGTAAAACAATAGTGTAGAGAAGAAGTGA GTTATGTCTAGCTGGGCAGCTCTCTTTCTTTTCTCCTTGTTGACTGGTAT TACTATTCTGTATTGTGCGTTTCAATTATATCCCGCTGGCACACGATTTG TGAGTCGTAATAGAGCTCTTGTTCAAGACGACAGTAGCCGTGATGTATGT AaagaatataaaatttttctgtcAAAATTTATCCCCTCTTTctatctttt gttattttgttttttaatatcTATCAAAACTAATTAATTAAGGTGTAAAT TTTCTCTAAtcaaatttttgaactttttttaaaaatgaatcaATCAAGGA ACGTCTCTAAGCATAACACGTGTCCCTCTTGTACACGcaaataattatca taaattaATAAATGACTCGTTCACGCGCGTGCACGAGGCGAACCACATGT AAACTATGAATGACATTGTTGACAACAAGTTTTGATTgatcaattatttt ttgaaagtgtcaaaTTTTTAAAGTGACAATAACAAACGAATAGAATTGTG ATAAAAACATTGGCCTCaattatttaaatattttacatAAAGCACTATCC aaatgtaaagaaaaattatctaATCTATTATTTTAGTCATCTTATTTTTA CTGATAACATATATCCCCTTCAAGAAATTCTAGCCTGGCCAGAAAGACCA CGAGTGCTCCTAGTATGCTAGACCGAGAGACACCAAAAGAACTGAAAAAG ACCTGTATTGGGCGTTTCGAAATCGGACGTCATGAATTGTAAAAAGGgtg gaaatttcgaaaatttttttactaTCTATAGCACTGATGATGGCATAAGA CCGAAAAGCTTCTgcttcaatttttaacaaatgttgttctttttacttaa ttcgaaaaaaaatatcaagaattattCTTTAGATCAGAAACTTTAACTTT AAAAGGATTTGATttcgcagactctaaaacacccgatttcttaggaaaat agacaaaactaCTCACaagtggtgaaaataagaacatgttaagaacattt caaggcttaaaactcaaaaagttaagaaggcTTCAACGACTCTggatgtt attataaaaaaacttgtatcatgaaaattataaaattaccTTNttaattc gaaaaaaaatatcaagaattattCTTTAGATCAGAAACTTTAACTTTAAA AGGATTTGATttcgcagactctaaaacacccgatttcttaggaaaataga caaaactaCTCACaagtggtgaaaataagaacatgttaagaacatttcaa ggcttataactcaaaaagttaagaaggcTTCAACGActctggatgttctt ataaaaaaacttgtatcgagaaaattataaaattaccTTCTTCTTTATCT TCTTCCAGTTCATACCGAATCCAGTGCAGCAGCAACGATTGAATTACCTC CGACATTTTTGTCAAGCTAAACGGAAAAAAGATGGCGGTACGAGTCTCAG AACATTCATACAGCAGAGGTTTCTTGAGCGAGAGCAAAAGGGACATATAT TCGTTAGTCGCGTTCTACCGGTGCTCTATTGCGCCGTACCCAAAGTCGCT AGTACGAACTGGAAGAGAATGCTACTTTTGTTCGATGGTATAAAGTCAAA CATTAGTGAAATGGGTGTCAAATCGAAGGTTCATACGCAACGAGGTCTTC GACCCTTGTATCATGTCAAGGGACACGCGATGCCAAAAGTTATAAAAGAC TCTTTCAAGTTTATGTTCGTAAGACACCCTTTTGAAAGATTAGCATCTGC ATACCGGAATAAGTTCGCGGATAACAatacttattttgaaaaaacgtaCG GGTCAAGAATATTGAAAATGTTTCGAAAAGATTTGAGTAAAGAGGAATAT AATCGCGGACGCGGTGCAACTTTTCAAGAATTCGTTCGCTGGATTGTGCA GGTCGAACCATATGACCCGCATTGGTACCCTGCAACCAAACTATGTCACC CATGTCAAATCCGATATAACTTTATCGGGAAGATGGAATCACTTTTGAGA GATGCAAAGGAAGTGGTGCGACGTGTAGATTCCGTTCATAAGTTCCCCAA AACTTGGACCGATGGCTATAAAGTCAGTTCGAATGATTTGATGTTCCATC TCTTCTCTACTTTAGATGAAAAGGATATTTTAGGGATTTACAAATATTAC AAAGAAGATTTCGATGCTTTTGATTATGGCCTACCGAGAATTCAACACTC GTATAATAACAAGAATAACCTTCTCTTGCGTACTTTAAAAAAGATCTTGA ACGGTAAATTAACGTGATGTACAGCAGCAGTTGAAAATTAACAGCTTTCG AAACTGAATTTATGATAATGTATGATATATTTCAATTAGTGAACTTTTGT AACCTTGAATTATCATTTCGAAAAAAGCACAGAAGCTTAACAAGCATTAG GGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053439TCONS_00053439Clytia hemisphaericatranscript
TCONS_00053440TCONS_00053440Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053439-proteinTCONS_00053439-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:272140..274644 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CHST13carbohydrate sulfotransferase 13 precursor Homo Sapiens
CHST11carbohydrate sulfotransferase 11 isoform 1 Homo Sapiens
CHST8PREDICTED: carbohydrate sulfotransferase 8 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25 0.24 0.7 0.96 3.01 0.6 1.33 2.33 0.71 0.65 1.34 0.59 4.78 5.38 4.18 3.41 1.4 1.52 0.21 0.78 0.88 0.99 0.21 1.51 0.77 1.67 1.02 0.42 0.11 0