XLOC_033744 (gene) - C. hemisphaerica

Overview
NameXLOC_033744
Unique NameXLOC_033744
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_231:99275..108185-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033744 ID=XLOC_033744|Name=XLOC_033744|organism=Clytia hemisphaerica|type=gene|length=8911bp|location=Sequence derived from alignment at scaffold_231:99275..108185- (Clytia hemisphaerica)
AGAAAGTACTAAGTAAAGTCACCCGCTCAATGTGAAATACAAGAAGAGTA
AAGATGCAGGATTACACAGTCGAACCGGAAGGCTGATAAACAGCAAACGT
GTTCCAACCAGCCAGCTTTCTCTGTTTTTAGCTTCATGAAAGAAAAACAA
ACTGGATTTGAGGTGAATGATTTTAAGATTCTTCAAACACTGGGCAAATC
TACATACAGTTGTATTGAGAATCAAACCAAACATTCAAGGAAGGAATTTC
ACAACAACCAAAATGACTGTGAGTAGTCATATGTTTTATTTTCTTATAAC
TGTATGTATCCAGACCAGACGCCCGCACTCGATAGGATCGATCATCGGAA
CGGCTCAATGACAGATCAAAATGTGATCGATGGATTACTTGACGATTGGG
ATAGAAGATTGATGGAAGATTCAGCCATTAAAAAGTCTTGAGTATCGATC
CTTTGTTGATCCATTATCGAGCTAGTATTTCAATCGAGTATATCGATTCA
TCATCAATCGTTAATCGATTCGTCATCGATCGTTAATTGATTTGTTATCG
ATCGTTACGGTAATCAATTTTTATCGATCATAAGGGGCATAGTTGTCAAC
TCTCAAAGATTTCTCCCGCTGCGTGAAAAAAACTCCGCCAAATCTCCCGC
ATTTTCAGGATTTTCTCCCGCACCACTGCTGTTCCCCTCAGGCAAAATCG
TCGATTCTGTAGAGCTCACGAAATTGCCGAATACAGACGTCAAAAAAAAA
ATAATTCAAAATGGCTGCCGAGCGAGCACTGACAAAAACAAAAAATTAGG
AGTTTTCAATTGCCTACTACAGCAGAATAAGACAGAGAAATGCAGTAAAA
TAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGTCAAAATAAGGAAAATATTCTAGCTGCAGT
AATGTTTACATTCAGAAATAAATCCATTTTCCACCAGACCTACAACAAGG
TTTCAAACCACGCTGCGGCATTACTGCAATGCAATGAATTCTGACTTAAA
AAATGTTGGTCCAGTTCCCTAGAAAGGGTATGATTACACTTCCAAATGAC
TTTTTATTACAATAACATTTGTCTTCTCACAAATCCAAAAATAAAGGTTA
TAAAACCAACACGGGGGTCAACATTCTTTACAACAAACCGTCAGATCAAA
CTTTATAAAGATCAATCACGTAAATGTCACTTGTTTTCCTGATATCTGAA
TAATATTAAAACCTTTCTGTATATATTTGGTTCTTCAAAACCATTTCCTT
TTCCCGCAGCAGGCTTTAAAGTCCATGTTGACCCCCGGTTTTATTTGCGC
GGTAATCTAGAAAGGCCTTTAGTGCGGTATAAACAAATGATTTCATTGGT
TTAAAAAAGTCAAAACATCAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCGTTTTAATTCGGCAAAGTTTAGTAA
ACTCGACCACGTATCAATGTTTTGATTTTTCAAGCGGGGATTTCTGTAGA
ATGATAAAATATGGCTTGGCTGGAATCGACACCATAACAGCAGTGGCACG
TCCCGCATTTCCAAAATTTTCCGATTTCCTGAAAAAAAATATAGTGGATT
TGGAAAAACGAAAGAATTCTCCCAGATTTCCCGAAAAATGTTTCGATAAA
ATCGGATTTTGCGGAAGAATTTTCCCGATTTCCTGATTTTGAAGAATTGA
ATTATCGGGGAAAATTTTCCGACTTGGAGCTCTCCCGCATTTTGGTGAGG
CGAAGTTGACAGCTATGAAGGGGTCACTCACAAATCGATTTTAGGTTAGA
AGAACGTCAATTGACGTTTTAAAAGCTGACCCACCCAGCCACACCCAAAA
ACGTCAAACACCTTGATATCCCCAAAAATCGATAAAACTACATCGCTGTT
TCAGCCATCTTGATTTTCACTACGGCTCGCATATAGTTTATATTTGAAAA
AAAAAAGAAACAGAGATAATTTTTGAACTTGTTCACAAAATTCCCGTAAT
TAATTAGTCTCCATAGTATGTAGCGACAGAAAAGAATGTCCATCTGCAAA
AATTCAAGGGCCGTTCGAGCAGTCATACAAAGAAAAGACATAAACATTGT
TTTGGTTTTCAAAACAAACGAAGCGATCAAACAGAAACATGGCGAGAAGC
AGTAATATTTAGCATGGAAATAAAAATCGATGCTTCTGAAAAACGTCAAC
AACCTTTAACCTACCCACCCATATACGTCAATTGACGTTCTTCTAACCTA
AAATTGATTTGTGAGTGACCCCTAAATCGAGATCGATAAAAGATCGATTA
TAGATCAATAAATAATCGATAACTAATCATAAGCTTAAAAAAATCTTGAG
TATCGATCCTCTATCGATCTTCTATCCGGATCGTTAAGTAATCCATCGAT
CACATATCGATCCGTCATCAAGCTGTTCCGATGATCGATCCTATCGAGCG
CGGACGTCTGGATGTATGGCGCTCTAAAAGTAGAAATGAATACTTTTTTT
TAGACAACACTAACTATCTTTGTTAAACGAAACTAAATCTTTTTCAAACC
CACTGATTTCAATGCTCCAAAGATGGGATGCTAACTTTTTTAGCTGTCAA
AAACTTAGGGGATGGAAATAATAATATATTGTAGGGATCGAAATGTCCAG
ACGATCTCAATCAAACGGAATCGACGATCGAACCAGTTGAACCAAATCGA
ACTCAATCGGCCGATTGAATTTCGATTGTCGAAAGCAATCGAATCTCAAT
TGAACGTCAAAATTCTGAGTAATATTCGGCTAGTTCAAAACACGGATCAC
AGGTCACGAGTTACGGGGCAGCTCTGATTAAAGTAACTCAAATAGAAATT
GTTTTAAAAACGCTAAAAATTACTGAAAAAATCAATTTGAAGGTGTTTTA
TCCACGCATGACTGTTTAAAACGTCAAAATCTAACCACGTGCTTTCGAAG
TTTGCGTCGTGTACAACGCAGACCAGAAAACACTGCAATAACAAGCTTAT
ATTATCAATAATACACTTTTAGTGCTATATGCATTTTATATGTTATACGT
AAGTACCATCACCTGAAAACCGAGCTTTCTCAAGAAAATGATAGTACGGC
TAGTGTTAAATCATATCTCATTATATCCCCTCCATCACCATGAGTATGAA
TATGATTTTAATGGATAATAACTTAAAAATGATGTTAATTTATAAATGTG
TCAATATTTTCCACCTACCATTATAAATTTTTAATAAAAATGACGTAATT
ATACTCATATCTCTAAAACCACTATCTTGCAGCATTTAATCGTTTTAAAA
CATGTCAATCTATATCCAGTCACATGATTAGCATCCTATTGAGTATGAAA
AAGTATTTTGCTGTAAATTGGTTCGGAGGCCTTATATTTCATGATTTTAA
CAATATTTTTGTCATTCAATATCATTTTGTCAAAATTTGTGGGTGACATA
TTATTTAAAAATTTTCATGGTATGATGATAATACTATTCGTATATAATTG
TTTCAGACATACTATTCTCAACTTCAGTTGAGCTAGAATCTGAGAATGTC
TGTGTGTGTGTCTGTGTGTGTGTCTGTGTGTCTGTCACCAAAACTTTGGG
GCAGGCTGGAGACTTCAAAAATGGTCCGATTTGGCTGAAATTTTGCGCAC
TTGATCCTTAGGCAAATCCCTGGGGGCGTTTTTTTCATTTTTTCAAAATT
TTAAGTTTTGGGGCCTGGGGACGAGTTTTTCGCCAAAACGAGGCTAAAAC
TTTGGGGCAGGCTGGAGACTTCAAAAATGGTCCGATTTGGCTGAAATTTT
GCGCACTTGATCCTTAGGCAAATCCCTGGGGGCGTTTTTTTCATTTTTTC
AAAATTTTAAGTTTTGGGGCCTGGGGACGAGGTTTTTGCCAAAACGAGGC
TGAAACCCAAAATGCTATAATTTTTCTTAAGCCATTAAGTTTACAATTGG
GCCTACGAATGATTTCAAAGATACTGAAGTTGAGCCAGTGTGGTTAGCAC
GTTCGACAGTACTAGTAGTAGTACTATTATATGTGTTATTCTCAACTTCA
GTTGAGCTATAATCTGAGAATGTCTGTCTGTCTGTCTGTCTGTCTGTATG
TATGTCCGTCCGAAAACTTTAGGGCAGGCTGGACACTTCAAAAAAGGTCG
GATTTGGCTGAAATTTGGCACACTTGTTCCTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCAG
CCTGGAGACTTTAAAAATGGTCGGATTTGGCTGAAATTTGGCACACTTGT
TCATTGGGTGAATATCTGGGGGTCTACAATTGGGCCTATGAATGATTTTA
AGCCACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTCGACTATGTAGTAC
ATGTTATGAATTATACGTCAAGATATCGTTATATTTTTTCCGGTCTGTAA
TTTATATGCCCCATACCCTGTGCCCGTACCCCCTGACCCGTGTTTCGAAC
TAGCCGGGTAATATTCGATTGATTCAATTGTTGTTCGACTGGTTCGATTG
TCGTTCGACTGCATTCGATTGTTCGGGTGAAACAAGGCATGTCCCAAATA
TATTTTGCGTGACGCACCGCTTCCCATTATTCCTTAACTCTCATATATAG
CTGAAAAGAATGGAATCAACGGAGGATTTCAAAAAGGGTCAGCTTTTTAA
CAAAGATTAGTGTCTCTAAGGGTCGGATCCTAATCGAACGCAATCGAACA
TCAATTAAACGCAATCAAATATCAATCTAATCTGAAAATTGCGCTAATAT
TCAGCTGCATAATTTCGCAGCCTTAGCCTATGGACCAAAACCGGCATCGC
AGGGCCTGGACCGGGGTCCCAAAATAATGCGCATTTTTGGTCTGTAATTT
GTATGACCCGTGACCCGTGTTTCGAACTAGTCGCAGATAATCTGTAAAAA
AAAGGGGGGTAAGATTTCATTACAGAAGTGTTGAGTACCGTCAACGGCTC
TAACTTGGGACAATTGGTCAAAACATTGGATTGTTGATATATGGCCTGTA
TTTTCACTTACTGTGACAGATATCGCAATTGCAATTTTACGTGGAAAAAC
AGACTTTTTTATATCTGTGTTTCGATGCTTGCTTGAATGCATGCAGTCGC
ATTTACATATTTCTCGTTGTTCTTTTTGAGCCTACCTGGTGACAGTAATC
TCAATGCAAGATTTCAGTCTGAAATCACAATTTTCGTCAGAATACCTAAC
TTTTACATAATACCTTTAAAATTCTCAGCACCCTATCAGGCTTTCTTTTA
CTTTTTTTTTATAGTTCAATCATGTAATAAAGGTTTTTATATGACTATTA
TTGTATTTTTATATGTAGGGAGAATGGGCCTTTGGGCTTGATGTTGCTTA
AATATATAGATAGATAGATGGATAGATAATAGCGTATTCACATTATTTGG
TTCAGTGAAATCAGGGATATGTAATAGCCAAGCTGGATAACGCACATTTA
AAAAAGCCTTGTTCTATCTCTGTACCCTGACATTAAAATTTGATTGAAAT
TTGGATTTTCTCTTAGCCAATGAATCTGCTGTTGCATTTATCCTTCATTA
GTGATCAAAGTTCTTCAATCTCAGATGGACTTCCGTCTCACAAAAATATT
TGTCAAAGTTATTCTGTATCAGTTAGAAATTTTTAAAGAGGGATTATGAA
AGCTTCTCAAATTCATAAAACATGCTGATAAAATTAGATTTCATTTATAA
GGAAACTTTTGGGGTATCTTCTGCAAATATTATTTTGATGAAAAGCGAGA
TAGCAAAAAATGTGCATGAATACTTTGTCTGCTTCATTTTTCTTATAAAA
ACAGAACACTCACGGGTACAGAGATGGGTTTCTATTATGAACAGTTTATA
GAAGCAATCTGCTAAGGAATTCTCATCCTTCATCCAGCTTCGCTATTACA
TATCCCTGGTGAAATGGTGGCCGAATTGGCATCCCATTTTTTGTCAGATA
GTCCCAAGTTAGAGGGGTTGACGGTATAAAGGGAGTTTATATCTTTGCAA
ACTATGTAAAGTTCAAAGCTTGCAATCTTCAGATGTATTTTCTTCTTACA
GGAGCAACTTGAAAGGAAGAGTAACGTCAAAGTTAACACTTTGCTTGAAA
TTGAACAGAATGTCCAAAAGAAGTGGTATGATGCAAAAATCTTTGAAGAA
AATGCTCCACAGGTAAGGCGGTGAAAATGTCAAGCTCCTTTTTATGGCTC
TCAATGGCCAATTAAGTTTTGAAACTGTATTGGGAGAAAATGTCAAATAC
TTTATAGTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053450TCONS_00053450Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:99275..108185 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
106.7	111.76	148.58	144.49	70.61	53.69	72.74	80.64	66.24	53.55	79.37	68.86	83.07	69.5	58.71	87.28	58.22	79.15	27.76	32.86	62.99	71.65	72.74	84.55	59.05	66.47	48.47	41.88	57.24	60.25