XLOC_033830 (gene) - C. hemisphaerica

Overview
NameXLOC_033830
Unique NameXLOC_033830
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:1465997..1476160+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033830 ID=XLOC_033830|Name=XLOC_033830|organism=Clytia hemisphaerica|type=gene|length=10164bp|location=Sequence derived from alignment at scaffold_233:1465997..1476160+ (Clytia hemisphaerica)
gttctCAAATAAAAGctggaatttgatgcaagagctAGATTGCCAAAAAA
TCCTTTCTGACTGGATGATGCTTAACCTTCATTTGATGGGATGTTAATTA
AACAAATCACACAGCAATTTCTTGattggacaaaataaaacaatcaatAT
CGCTTTAGTGattggataaaaaaatatttggcacTTTCAAGAGTATCTAC
AATCTAcgattgaacaaaataaaacaattcgCATATTTTCGAGGGGgtga
atttttctttcatgTTTTCCGATCCAAGGAGTCTTCATTATACCGTACTT
AGCTATaacataacaatccaaaagccCCCTAGCAATCCAAAAGCAAAGTA
GTTTTGAGTTTTGCAAATTCCCAAGATTAGCTTTTATTGATTGCTTAAGT
CATTGTTGACTTTCGAGTCATTTCTGGAAATGGAAACACACAATATTGTC
AAAGCTGTCCTTTATCACAAACTAAGATCAAAGTGATGGCTATTTTATGA
TTTAGAGTCATATTTTAATGATCCATAAATCATGTTCTACTTAATTATGT
TCTGTTACgatttttctgtttcttttAGGTTCCCCATTCAATTAGAGTAA
TCTATTTTTGTTGTAGGGGGCGGTTATCCTGTTGCGTGGTAGCGAAAATA
TGtttaattcaattcaattcaagtTTATGCTCATTTTTAATGTCATCACC
ACCTGATCTGGAACTAAAAATTCATCAGTGAATCCTTGATAGGTGCTTTT
GctttgggctattccattttatatccatacttCACAAGGGGTGGACGATT
ATATCCAGCGGGTAACTgcaattattttaaattgaaatgttttttcttat
attgtataaaaagaaattaaacaatCAAGGAAGATGGTTTTAAAAATGGT
CTGGTTGTTTTGCATTTATTTGTTGATTTCTCCTGTCTTAACACAAGGTA
AAAAGAACTCTTATTTTTGAGACAAAAACTTAGGGAAAGAAATATGATTA
CTGTATGTAGCTCAATATTACCCACCTTTTAGgacaatttttcataattt
tgtaaTTATAAAGTCTAACTGAGATCtctcaaagattttccaaaacttCA
CCCCGCTGTAACATACAATAGCGCTCTTGTGAATTATaggacttttttat
tcaatataattattttattgtaaaaagAATATTCATTGCTATGATGAAAC
TGTATGTAAAATAGGGGCAAAGAAGTAGACAGAAAACCTCAGTATAGAAA
CAAAATTATACCTTTCTCATGAGTAAGGTCGGCCAgctctaaattttttt
tttgtttccagGCCTGCtggtaaaaaattttttcatcacCATCTGGCCAC
AATTCTTTTTTCTACATTGTCTAAGCTTCAAACTTTAAGCTTTGTCACAC
TGAAATTTTGTTCAGACATTTATTGGGCACTGTGTAGATTTTTACTATTG
TCTTATTCTCAGATCCATGCATTGATTACATTCTGAATCAGGATGAAGAT
TCATGGAAGAGAAGCATTACTTACCAGAATGTCACAGATAACAAAAGATG
TGATCGATTGGGTTGGAAAGAAGGATGGCATAGATTCACCAGTGAATCAG
GAACCACCATGCCAACTGAATGTCCTTCATTAAATTCTTGTGGTAACGAA
AGAACCTTAGCTTTCTTAATCTtataattcttttttcagttttctaAACC
AAGCTGAAATTGTTTTATCTAACTTAGATACGCAATTACAGTCCATTCAC
TTTAAgactttaagtgtgcactaattTTTTTGCTACCTTCAATACTCAAT
AGGTTATGTTTATGACCTTTGATGCAAGAATCTTAAAGGGAAATAGTTAT
ATATTTATGATTCATTATTATTAATATATTTactgtgattttccttgagt
gttcccagaatactttcaacaccaaaagatttcaggaccctatttgaaac
cattattgagattttagcctgagaaaatcagactttaactctaaatatcg
cgttttaggtgggaaatgcaataccataatattagacttgggcaaatttc
tgacccaaaccattttgattctcccagagtattttcagaatactttcaac
accaaaagatttcaggacaccattgttgaaaccatttttgagattttagc
ctgagaaaatcaaactttaactctaaatatcccgttttagtgggaaatgc
aataccataatggcagactttggcaaatctctaacccaaaccattttggt
tctctgAGAGtacagtatttccagaatactttcaacaccaaaaaatttca
ggaaaccatttgaaaccatttttgagattttagcctgagaaaaccaagtt
ttagcttgaaatattggcaattagcatgaaaactcaatttctagggcgcc
attatggatttataggaaatttttgaaaactcaagtttgatttttcctgg
agctttctctgaagtgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNttcaagtgtgtaccttaaaaagtttaaaa
gttgtgggtcctcaaaaatgctgctttcatgcattttgctacccagaatc
ggagaaaatcagcctttttatcttgaaattgaaacattgagcgatctcgc
tgggattattttgtctttttatgttgaatataTATTATGCTAAGATTaat
tatgtaaaaatttgataccgctaacttcatttttttattaaaatcacCAG
GTACCATGTTCCCGATATGGACGAATGGTTCTCATCCAACTTCTCTAAAT
CAGGAGAAGACATTATCAGCCTGTATATCAACCCACATAGACTGCTGTTC
CTATCCCTACGATATTAAAGTCAAGAAATGTAAAGATAACACTACTGGAG
ATGATTTCTTCACTTATTACTTGCCACCTGTACCTGGATGTGATATGGGA
TATTGTATCGGTATGTCAAACTTACCCAGACATTATTTTCAACCATCTTC
TATCAGAAGGTTTGACGTNGAACTTACTCAGACATTATTTTCAACCATCT
TCTATCAGGAGGTTTGACGTATGGCAGGGTGTGTACATGCATTTTTTCCT
TTGGAAAATCATCTCAGCATTTTTAACTAAAATTATGTGTATTCGATCCC
TTTATTTTTaaactaattaaaaaattaaagttaaaaacTTAACGCTTCTG
GTTTTTCTTTTCACCATTAAATTAATCGCCCAAGGAAATATCTTTCAATA
AACTAATTGAGTTTTAGATATTATCACtttcttcctggaaatttcCAGTA
AAACTAAGACAacaataagaatatttttgttttgacttagATTGTGCATG
ATGAaataatactttaatgggataaactttcgcggggattaaatttcgcg
gatttcgtggatttgggtgtcatctgcaaaaatccgcgaaatttttgaat
ttcgtggATAGGCCCATCCGCGAAGTTTAATCCCCGTGAAGGTTTATCCC
ATTAATGGAAGGTTTCGTgtgaataaaatttttattgcttATTATTTCAT
TTAGGTCAGGAAAATCCATGTAGTCCCGATGTTTACAATGTTTATAACTT
AACGACAATTTTTCAACGAAGCACTGGAAACATTGTAGCCGCAAATATAA
CAAACTTTGTTTGCGATATCGATATAAACCCTTATAATGTTTGGCAGAGG
TTTATCAGCCCAGCTGGCGATGAAATGCCTACAACATGTCCTCCTCAGTT
TGCATGTGGTAagtttttttccttcttctctATTAAGTTTCTTTCAGCTT
GTAGATTGTGACTTTGACAAAAGGACGCATGGAGTCCAACATATAATATG
TTTTAGAAAAGCTACCGTAAGTTCGATTGTTTCTTGAATCTGTATGTGTG
ACTTTATCAAATCAGTTTATTAATGAGCTCTCCCCTGTGGTAACGGTCAT
CACGTCATCACACCAAATGTTTTGCTCATATCACGATCATGAAAATTGCT
ATAAAATAAACTACAATCGTGGACGAAAATTGTGAGATTAGAGTAGAATA
CAAGCTTCTTCCTCTCCCCCTACTGGCAATGTTTAAGGACATTGGAAAAG
TTGTTGGGGAGGCCGTTCGCACCAAACATTGCCACTGAGGGGGGGAGGGG
GCCGttccagtgtttttctcaaacattaagTCCATGATTGCAGTTCATGC
TATCACGCCTAAATTTTCCTTACGCCACTTGATTACATCACGTTATAATC
TTTCACTGTCACGgcaaaaaaatcgcaaaataaCGGCTAGAGGCTTTGTT
ACCCCatctaatttatttttattataggaACCCGATATCCTGTTTGGCTT
AATGATACGTACCCGACAGTATATAATCATGCAAAGAGTGTCAAAGCTTG
TATCAATGTTGAGGGACTTTGTTGTTTCGAAGAAATGCCAATCCAAACAG
CAAGATGTAAAGACAATGTAAAAaacgaagatttctttgtgtacAAGCTA
GTAGAGATTGGTTTGGCCTGTCCTGTCGCTTATTGTATAGGTAGGGTATT
ATTTAGTAGAACCGTATATCACCATATTTATCTTTAACAAGCTTTTTTTT
CGGGGGGGGGGATTACCAGGATAGGAGAATGTGGAGTGCAAACCTCTGAC
AAACCCCAATACCTCCAAACCTTTAGATGCTACAGTATTTCATCAAGCTG
TTCTTCCTATTGCATGTTTTCAGGTAATTTTAAAAGAACTTCCAAGCTGT
TCTTCCTTTTGCATGTTTTCAGGgcattttaaaagaattttcgaGCTCTT
CTTCCTTTATATTTTTAAGgaattttaattaaatttgaatCTTTTCCACT
GGGAAATAAATGAAACATATCCGCTTTCATATGCAGGAAAAGAAGTAAGA
TGTCCTGCTGGTCAAACATCAGCTACTGGATTTACACCTTGTCATGGTAG
GTTTTGATTGTCAAGTATATAAGCAAGTGAATTTGTTTACCTAACAAAAA
TAAAGCATAGAATTACTTAGGTTGCACGCATCTCCTctaatatgttttga
tataggggattcTAATCGTGAATAAATTTCCCGTTTGAGATTTACCCAAA
ATTCGGGGGTAACctgcttcatttttttttaaggttTAGAAATCCAATAA
TTGTATTAACCACTGGCCATTCAAATTTATAAttcaattttaatgaaatt
taaaaatctattataTAAAACTTACTAATAAAGCTAAACAAGTTTCTAAA
ACTCCAAAACACAAAAACGAAGCAATTCTCGGATGGGAATTGTATACACG
ATGCGCATCCCCTATATACCACAATAACCGCATGTAGCATGTAGCCTAAG
AATAATTTGGAAATGGTGTAAGTGTTCGAACAGATTGTACGTTAACTCCG
GCCAGCAGAATTGCTAAAATAGCAAGCCTACTGGATTGATTAACGTGAAT
ATGCACAGGCGAAGAGCCGATTATTTAGACCTGTGAAATTTGCCGTTCGC
CAGGTAAAAATAAGATGCCTGTTCGTACTGTATTCGAAATAATATAAGCA
AGGACACAACTTTTTGAGGGTAGAtagaaaacctggcccacctctctggc
ccgggccatatggcctacccttggcctaccctttggcccaccttacagct
ctaaaaaagatttgattcttatcattctgaaaatctgcaaaccaATTCTG
AAGTTGGACTTTGGTTTTTCTGGCATTTAGAAAAACAACGAgattgaaat
aaacaaaaaaaaataaaaggtttTGAGTCTGTATTTTATACACCTGACAT
AGATTAAGGGGACCCCCGGGAGAGGGTCTGGTTAAGTCCTGTACGGGTGC
CAACAAACCCCGTAGCGCtgtttcttcaacttttcaggacttcggacccc
ttttttcggaatcttcacccaaaaaaacataaagtatCAAAACCTGGCGA
AAAACTTTGACGTTGACCCGAACCCGACTCGAACTCGAGATCCCTAGTGC
AAGAGCACAATGCGCTACCATTAGGCTAACTTCTGTTGAAATTAATTATT
AATTTTAAGGGTCTTATCCCTTGGTCAGATAAACAAGACCTACGTTAAGA
ATATATCACCCTCAATTTTgccactttcttaagaataattGACcctctca
tccaaagtacactattcttattaaaaaaaagcatttAGAAGATTTGACCA
ATTGTTTGTCGTAAAACGGCTGATGCAATAACGCCATAACGCGCTTTATG
atgaggcccggaattcccgagttattttttccgagttaaaaaaaccgagt
taaaaaaaaccgagttatcccgagttatgacgtcatttttggaatttagt
gaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaactcgg
gaattccgggcctcctTTATGATGAAATCATAATGAAATTATAGCGCATC
CCGACGCACACATATCATTATAACCTGGTTGTCCGATAAtaaaatcgggg
aaaaaaatgtttgaaggtgggccaaagggtgggccaagggtaggccatat
ggcccgggccagagaggtgggccaggttttctaccTACCCACTCTTTGAG
GTGAATTTGCTTCGtttgtttttatcttgaaatGTAGATATCTTCTTTTT
AAATCCCTTACTACCAGTCCCTTCAGAAGTCGACCGCTCCTGATAGATAT
ATTTGACACGAGATGGTTGAAGAGGTGTTTATTTTTGAGTTCGTCAGCGT
TTACTTACAGAGACAGGCCTTTATACTATTATAACACTGAAATATATatt
tattctattttattatAGTACCAAGCACAACACCAATTACCGCACTCAAT
ACCACAACAGGTAATTATATTGTAAGCAAACATTGCTGgtcatgtttttt
ttgtttcactttaaaaaaagttacaatatTCCTGTTTTGTGAAACTTTCA
GATATAAAGAAGAACATGACAAAAATCTTATTATTAATTCGGCACGTGTT
TTTCTTTGCACGAAATCGTGGCACATCTTTCTGGTACTTGCTCCATGGAA
TATTTGTGTTGGATAcgggaaaaaagtttttcgttTGATTGAATTGAATT
ATTGAGAGTTTcatcttttcttcttttcatttcttttagtTCCTGAGCAA
TTACCAGGGGACAAGGGTTCAGCAAAATCGCGAAGTATTCTTCATCAACC
AGGAAAGTTGGTTACCATGGTATCAATTATTCTCTCTACAATGATGGTTT
AAGTCAGCTACAACAAAATTATAATTCTACTCGATGTAGGTATCTTACTT
GCTTATACTAACTGGGCGattattagaattttttaaacatgtttatttta
taagaatggcgTAAATCCATTtgatcatggatattcttaacttttttgag
aaaatcatcctaaaatattcttacagcattctttagattaggatcctaat
tcagactagatttaacatttagtacacaaagtctcaaaattccatgatgg
tgatattcttagcatattcttaattttttggccactTTCATCATGGACaa
tcttataaagtgtattcttataaaaaaggcgtGTACACAGATGTATTTAA
TATCTTTGGTAGATAAGTGCTAGTGAAAAAACTAACCCAATTAGAGTTTA
AAATCAGGCTAATCAGAGGTCTGACAACCTTTTTTAGAGTCATTTATTGG
ATACTCGAGATTATAGGGTCATGTATATTTGGATATTCTGTCCTTAAACA
TTGTGCACAAAATCCAAAAGATTGGCACGAGTAAAGGAGGGCTTATTAGG
Catctacccagctggcacacgacattgtttcaagatttcaacgttcattt
aacgttatttggacgttgtgaaggttagataaacgttgaaacaacgttgt
gtgcttgCTGGGTAAGTAACCAAAATAATGAACTGCTCCTtacatttttt
attgaaaatatttagaattAGGGTCAtgtgtttttgtatattttggatga
tctggagtttttacaacgtCGGCTAAAGATTTATTCCTGTGTAGTTTACC
GAACCAATTCTATATTCTCTCCAACCCCCACAGTATACTTGTACCCTTAG
TTCCCGAGGTTCCGAGATGAAAATATACCATATACCCTCTAGTTCCCCGT
CCTGAGATGGGAATATACCATATACCATATACCATATTATACATAGTTGA
GATGAGCAAATAAATGCTTTTCttgttgttctgtaaaattcagaaatttt
tatGTCTTATAAAAAGCCCAGACTGTATATTTTGTCGTTAAAAACATTAT
GTaattattaaattttcaaatttttagaattctgtttaatttttttcatc
gcCGCTTGTAAAGTacttatttcaatatttttatttcatgtttttcctaa
aaatgaaaaattcc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053616TCONS_00053616Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053616-proteinTCONS_00053616-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1465997..1476160 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.45	4.63	5.23	4.89	3.54	1.93	1.88	1.64	2.3	3.1	1.6	2.17	2.47	2.56	6.03	5.36	3.26	3.67	2.46	2.84	2.84	2.92	6.72	8.18	13.62	12.5	5.25	4.4	5.27	5.12