XLOC_033973 (gene) - C. hemisphaerica

Overview
NameXLOC_033973
Unique NameXLOC_033973
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_234:282627..294389-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033973 ID=XLOC_033973|Name=XLOC_033973|organism=Clytia hemisphaerica|type=gene|length=11763bp|location=Sequence derived from alignment at scaffold_234:282627..294389- (Clytia hemisphaerica)
AACAAAGGCCTGCTTCATGACTTTATTGCCCTAGGGAGGTAGTATGATCA AATTATTGTTAGTGGCTTTTTTACATGAATTTCAGCTAAATTTATCTCCT TAAGGTAAACTTACCTTTAGTTAGATGTTTTGTTTCAATTAGATGAGCGA GCGACTTTTTATCTTCCTTCGATGAGACTGTATAGATTTCGCTGTACAAG ACTAGAGAGATATTTTCAACATTCAAGATGGCGGCCTGTGAGGCAAGAAT TTTTTACAATTTTTTTAGTTAAAAAGGTCTTGTTTTCATTTTATTCTCAT TGTCTGGTGATATGGCACCTAATAGTGAATACTTTGAAGTATATTTTTCG TTTGTATATTTCTTTATTGTTTTGTGTTTTGTTGTACCACCGAGAGAACT TATTGCAGCAGGATTGACTGTTCAAAATTTATTTAGCAACTATCTTGGGC ATGAAGACATTGACTTTGTTGGGTATCACTTGAAGAGAACCTCTATCACT TTGGCAATACATTCATGTTTTCCTTTTCGTAAGTTGGGTTTCTCAGTTTT TCTTTTCCTGCTCCTGCAGTTAGGAACATTTGGCGAGTTCCTGTACGCAA CCGCGATCTAAAAAATCATAACAACACTCATTAAAAAATGACGTTCGTGT GTTTTCGCACTTTTTTTAGCCTAGAAGATGTAGCAAACATAGTAAATATA AGCACACTGTGCTTTTAATTGGCTGAAATTTTTTTTTGCGTTGGAGAAAC TTTTTTAAACTTTCAGCTATGATTGAACAAACTGTTACAATAAAAATTAT CCAGCGCATTTTTTATCTTCTTTTCTTCTTAATCTTCAATGAAGAACTCA AATTTTACTGAATTTAAGCACATAAGATATTCTTATAATTATTGATATTC ACTGAAACACCGTTCGTTGTGTGCTGCGGTGGAGTGTATGACGTAACTTG CGCGGTAAATAACTTGCCTTTTGTTGGAAGATCGTATTGGGCGTTTTGGT GTTACCACCCTAGAAGCTAGCGGGCGCCCCTGTCTTTCCGCAACTCTTTC CACCATTTTAGATGGCCATAACAATAGATCTAAAAGGGCGCCATAATCTT GGAAGATAATTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNGGTCTCCAGCTTTGGGAAGTAGCAATGTTTTTGGTTGTTTTTG ATGGAAAATAGTAAGAAACTTAAGTTTACAAGTGTCATTTAGTTTTTTCT GGCTCATAGAATGGCAGGATCCTGGATGGTTTCCCTAACTTTCCTGGCTG GAGGATAGACCTTTTTTCAAAGAGGACGTCCTGTGACGAGTGACGTCGTC CTGTTAAATAATTATATAGTCAGGACCCTGCCGACGCACCGGACTGTCCG GTGTATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTACACCGGACGCAAT AAGCCCGGTGTCAGTCCGGTGTTGCATAGAGGGAATTTTGGACGCCGGAC ATTTACGAAACAAAAAAGTTAAGAAACACCGGACGCTCCGGACTGGTCAT TTCCGGTGTTTTGATTGTCCGGTGGAAAAAAATTACCTTCTCCGACACCG GACATCCGACTTCCTTAAGGCCGGTGTAGAGATTGTCCGGTGGTAAAAAA AATTCTCATTTTACACCGGACTTTTGCGTGTCCGGTGTTCGTTAAGTCCG GTGCGTCGGCAGGGTCCTATGTAGTCCAGCCATAAAAACAATGATAGAGC CATGCATAATTACTGTACCATGCATATTGTAATGATTATGCATGGTTTTA TCATTGTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGGCCTCTTT GAAAAAAAGTCTATAGGAGAGCACTTTTAATCTTTTAATATACCTTTTTA TCACTTTGTTTTTATTAGACAGGGGTCCTCAACAAAAAACTTAGGAATTT CTTATTGGCAGGTAAAGTAGCGATAAAATGGACAAAACCATAGTTTGAGC CACATTGCTTAATCAGAACCAGATGGTTTAAACTATTGTTTTTTTGTGCC CTTATAATAGACCTTTTTTAAAGAGGCAGCCATGTTGAATAATTATGTAC TCCAGCATAAAAACAATGATACAGCCATGCATAATTAATGTATCATGTAT ATTTTAAAAATAAGGCATGGCTGTATATTGTTATTATGCTGGAGTACATA ATTATTCAACATTGCTGCCTCTTTAAAAAAAGGTCTATGGACAAAACAGA ACGGTTTAAATTTTTTTTCCCAGAAAGTAAGCGGTTCAGGATCTTAAAAT TTTGAAGCTATCATTACAGCAACATTTTGTCTTATGTGTCATTTTTTATT TTGATTACCTAATCTTATGGCTCGCCAAAGCGGAAATAAATACTATCTTT CATTTTGCGACACTATTTGGAGCTAAACCTTAGCTCAGGTTAATTCCAAG TCGAATGAAGTACATCCCGCCACTGCACCGAGGCGGCTATGAAATAGTAT ATTTCGGCTGCCGGTTATTCTTTCCTTCGCCTATATATATCCTACCGTCA AGCCCCTTTCAGCGCAGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TTCTTTGCTAATGTTTTGAAATTAATCATTTTATAGTGTTGTGTCAAATT TGATTGATCGATATTCGTTGACTACTATCGGAAGTGTCTATCCTTTTGGG ACAATGGGTTGAAACTTTATAATAAGGGATAAGAAGACAAGTTTGACTGG CAGGTTCAATGCTCCAATTTGCAGCCAAATGTTTTGTGACTAAATGCTAA ACAGGTTTTTTGGAAATACTTGATAAGTCAAATTATTTTCGCTATAGGAG TTGATGGAGAAAGGGCTTCACAAAATGACTTAGTCATCCAGTATATCTTA AATGGAATCACAACCTAACTGTAATGGTATGGAGTACTTTGAAATTTTAG TGCTGTCCTTTCGAGACAAATACTTGCAGAATTTGTATTAAATGCTNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATATCCCTGCAGACGAGTTACTTGGACCAGACCGTAAACCAGAGACAAAA TATTAAAAAAAAACTAGACGTTGAAATAGTTTACGGTCTGGATATCCAGG GTACAATAAAGATAGTATCCTGTAAAAAAGATAGTATCGTTTCAATTAAG ATAATGTTTTTTTGGGAAAATAGTGTCGCGAGATGAAAGATAGTGTCACA AAATGAAAGATAGTGTCGCAAAATGAAAGATAGTGCCGCGAAATGAAAGA TAGTGTCGCGAAATGAAAGATAGTGTTGCGAAATGAAAGATAGTGTCGCA AAATGAAAGATAGTGTCGCGAAATGAAAGATAGTATTTATTTCCACTTTG GCGCGCCATATAATCTGGCATAGGTGAAGTGAAATTTTATTCATAATTGA CATTCTAACTGGTAGGAATAAGCCTTGGGGCAGAATTTACTGCACAGTCA AGGTTTTGTGTCCTGTACGTAACAATTTTATTTGATATGCCCTTATCATT TTTTGTGAAGCTGTTTGAACAAATAAATTGTATTTTTTAATTCGTTTACC TGTATGTTGTATAGCTTTGAAAACAGTTTAGGTGTGAAGACAACAAAAAA AAGGTTATTTGTCCTGCAATTGGTCTAATTGGAGACTGTTCTATGTAAAT GTCCCGTACGTAACAGACACAAAATTGCATAAATTATTTTATAAATAGTT TATAAGCATTATTCTTATTGCTTTTCTGTATGTCTACCATACTATTTGTC TAGAAATTATAGCCAAAGTTACAAACAAAACCTGATTTTGAAAATACCTC AGCTCAAAGTACATGCTGTCCCGTATGTAACCTTGTCCCGTACGTAACAA GATTAATATGCCCCTGAAAAGTATTTTTTTACAACTTAACGTTGTTTAGA CACACTTTCTAGGCTCTGATCAGTCATCACTTTGACTCACTTTGTAAGCT TTCCTGATGAGTGAAGCTTTGATTAAACTCTTTAACACGCATTTTAAAAC TTCAAGTTCAAGCTTCAATTGATTTTGATGATGTTAGTAGTGCTTATGGA CTTGTAAAAAATTTCATGAATAGCTCTAAGGTATATATTCTTTCTTTGAA GTGACATTAAAGAGGGCAGTCCAAAAATTGTTACGCACGGGACATAAAGT ATGGGTATTTTAAAGATTTTGAGTGGCAATTAGGGCTAGAATCTTTGGGA ATAGTCTTCAAATATATTAATTCATATATACCAAAGATTTTTTTAAAAGG GGAAAGAAAAATAAAGGGTAAAACTTCTTAAATTCTGTGAATTCTACGAA AAATATACAAAAATCCACAAGTTCAACTTAGAAAAAATGGTAAAAAACCG TAAAAACACCAATAATTGCAGATAATTGCACAAAAAACTGACATAATTGC TATTATGTCTTTTTCATGTTGAATAATAGTGCCACAAATCTGTACAAATG CCTTTTTCTTTGAAATATGTTGTGTTACGTACGGGACAATTTTTCATGAA AGTCGTTTGGGAAAAGCTCTTTTACTAAAAGCACTTAAAAATGCAAAACA TTTCTAATAAAGATTTTATTATTTCCTTATGTCCTTACCTTGATGTAAGT TAGCATTTGGCTATGAATTAATCAATTTTGAACACCCTAAGAGTTGATTT GGGGTAATTCAGCATTTTAAGCATAAAAAACAGCCTTCAATTTGAAATTT TGAACCAATTTTGTACTTGAAACTATTTGGAAATAATGTTTTTTGATGAC TTTGATATAGTTGAAGTGAAAAAATATCATTTAGGATCTTCACTTACTAC AAAAAAAGCATAGCCTAGTTAAATATGTTTAAATGTCTTTGTTACGTACA GCTACAGGACATTTTTCAAATTTTAAATCTTAATAACTTTTTTTCACTTA ATAAATTTTTTTTTGCCATTTTTTATGTCTACTTTACCGGCATTGGGCCG ATAAGCTTCAGATGCCCTCCCCCCTTGCTCTTATCAGCCAAAATTTTCAA AACAAACTTTTACCTCTTCGAAAACACAATTTTCTCTATCATGTCTGCCA CCATCGTGTTGATCTTAAACTTGCATTCCAAACCGTCATCGTTGAATTTT TGTCTATTTGCACCAGCATTGAGTTTGTTCATACCCGCATTGATATTGTT AATCAAAACAAAAGTTAAAAAGACGCAACATTTTGAAGGCGTCGTGGTAT AGTGGACATCAACCTTGATTCCTGTACAAGTGACCAAGGTTTGATTGGCA AGTGACGAACCTTTGCCCGGGTCAACCCATGCCATGTGAGGGGAATTGGG TAGTCAGTTCAAAGTGTTGACGGGATGCTTACTCAAAGCATCTATAGTTG CGAGAATGGGCTCTAGAGCCTCCTGTAACTCAACCATAATAGATAGATAG ATAGAGAGGTAAAGCTGGGCCAATACGCAATGGAAAAGAGTTTTTTATCT AAGCTAATTCGAAACTGTACCGTCAACTGCTCTAACTTAGGACTATCTGA CAAAACATGGGACGGCAATTCAGCCACCATTTCACCGAACCTCCAAATTC ATTTGATTTGAGTTAATGAACGGCGTATTAAAAAGTACACGATTTCTCTT TCGCACCAAGTAGGCTTTTAAATTGAAATAGGAAAAAAAATCCGCAGTGG AACACACACGAGTGTCTGTGCACTCTAGGAGGAACGAAGTAGTATGATTG ATAAACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAAC AGTAAGTGAAAATACAGGCCAGATATCAACCAGTCCAATGTTTTGGCCAA TCGTCCCAAGTTAGAATTAACAAATAACGAGTGTGCTGTGACATCAAAAG CTCCATCGTTTTGCAACTAATATGGTCTTCTTCGTTCCAGACAATCGCGC ATGTTCCACTACCGATTTTTTTCATATTTCGATTTAAAAGCCTACTCGGT GAGAAATTGTGTATTTTTGATACGCCGTTCATTAACTCAAATCAAATGAC TTTGGAGGCTCGGTGAAAAGGTAGCTGAATTGCCGTCCCATGTTTTGTCG ATAGTCCCAAGTTAGAGTAGTTGATGGTATAATAAAAAAGGTATACCTTT GATTTTGCAAAATGTTGAAACGAATGCAAACTTTTGAAAAACCCCAACTT GTACCCTCATAATGTCAAATTGACATTGTGCATAGTCAAATAAATATGGA GAGGCCCCCTTAAACTCAACAAATACAGCTGCATGTAACTGTAGCATACC AAGGGCCAGTCTGGAAAGGAGGAAAATGTTGCGTCGGAGGCGTTTTGCGT CAAAAGGTATAATGTATGTATGTATGTAATAGTTTATTTCCTGTTGACAA AAAGGTAGCAACAAAGGCTAATAAAATTCAACTCTACTTTACAATTTTTT TAGAGGTTGTTAAACATTTCTTCTTTTATAGGGAAAAGAACTTTTGAATC TACAAATTCACCGTTTCCTGAGAAAAATTCACAGTTTCCTTGTTTCTCAA TGACCAATAATTAAGTGCTACTCTAGGCCATTTTTCATGCCCTTTTAGCG TCCGGTCATTGGACGCTGTCCCTCCTGAAATCACTAAAATTTTGGTAAAA ATAGCCTTTTTTGCGGAAAAAACAAAAGAAACTTTCAAGTTTATTTGAGA TTTTTTATAAAAAATCAAAATAGCAGTCACTTTATTACACTTTATTTTTT GTTTAACAGTATACTACGTTGGTCTCGGAATATCATCACCAAACTTGAAG TTATTATACATACATAATTTATCAGGATTTGGTCTTCTATTTGCTCTGAT TTGCATTGGATCATTTACAGCAGGGCTCCTTATAGCTGTATCCTGGAAAA TCAGTAATTGGCAATATCATCCGCTAACAAGAGATTTATTGAGATATGGT TCGCCATGGAGAGCTGTTGCTTCAACAATCAATTTGGAATATAGAAGAAT GGAGAAATTCTCTTCTATAACAGGAGGGACAAGTATATATGTTACAGATT CATGGATTATAAAATGCTCTACCTACAAAATTTACATTGCACAGCAGACC GATTCACATTTATCAGTTGTTCAGAGTGAGGAATACTTATATAACCAAGA AACAAATCAAAGTGCACAGTTTTTGAAAATTAAAGTCATGACGATTCCAC CCAATGAACAGAGTTTCTTTCTCAATCTTAATTCACTGGAGTATACCGAT TTAAAGGATAGGATCTCATCTCCTTTGAGACTTGCCAGGGATGTGATTGT CCATCAAACATTGAGTGACCGATTCTTAGAGGCTTTCAAACTACAAGTTA GCACTAATGGCGCTCCAGAAGTCATGCCTAATAACGTAGCTGTGAGTAGT ATCATTTTATGAGTTTTTTTTCAGAGAATGACCAATTTCCATTTCTTTGA TTTTGGATTTTAAAAACATTATATTTCAATAGCTGTCTATTTTATACAGA TTACAAGAAATTTTGAAAAAAGTATGAGGCTTTTCAAAAAGAAAACAGGG CAATAATTTTTTAGAATCCTGTATTCATTCATTTGATGGTCAAAACATTT GAATCTCCTTCAAATCTAATAAAGCATGGATGCTAAAAAATCAAAGCAAA GCTTTCATCTTTTAAATGTAAATATAATGAATAATGTAGTCATATAACTT TGAAACACCCAGTATAGCTATTTACATTATCCATATAAATAAATTTTAGG AACGCGAAAGCTGTATTGGTTGTATGGGTATCCGAGCTGATATCGTTCTT TCAAAACATTGTTTACCAAGAGCTTTACCACAAGCTGAGCAATGCCAACA ATGTTATTGTAGACCAATGTGGTGCTTGGAATGCATGGGAAAATGGTTTG CCAGCAGACAAAATCAACAGGAGCCGGAATCTTGGATGTCTTCAACTGCG CCTTGCCCTACTTGCCGTGCTAAATTTTGCATGATTGATGTCTTCAAAAT TTAATTATAATACAGAAAACATTACTTTTATAAACATTTTTTTAATGTTT TATAAATGTTAAACTTGTTAGCTGTCTTAAAAATTGTATATTTTGGAAAT TATTATTTATTTTATCAAACAGGGTACAAATTACAGAATTCTTTGTCAAA TCATTATTTCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053839TCONS_00053839Clytia hemisphaericatranscript
TCONS_00053838TCONS_00053838Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053838-proteinTCONS_00053838-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:282627..294389 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM129E3 ubiquitin-protein ligase TM129 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
64.63 65.48 40.62 31.24 23.95 17.71 20.09 24.02 18.24 19.11 20.26 19.38 15.86 17.66 14.25 15.56 20.24 20.92 13.96 13.3 23.94 20.04 47.32 41.69 19.21 21.62 18.71 13.74 33.35 35.39