TCONS_00053839 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00053839
Unique Name	TCONS_00053839
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1176

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_234:282627..294389-

transcript sequence

>TCONS_00053839 ID=TCONS_00053839|Name=TCONS_00053839|organism=Clytia hemisphaerica|type=transcript|length=1176bp
AACAAAGGCCTGCTTCATGACTTTATTGCCCTAGGGAGCAACTATCTTGG
GCATGAAGACATTGACTTTGTTGGGTATCACTTGAAGAGAACCTCTATCA
CTTTGGCAATACATTCATGTTTTCCTTTTCTATACTACGTTGGTCTCGGA
ATATCATCACCAAACTTGAAGTTATTATACATACATAATTTATCAGGATT
TGGTCTTCTATTTGCTCTGATTTGCATTGGATCATTTACAGCAGGGCTCC
TTATAGCTGTATCCTGGAAAATCAGTAATTGGCAATATCATCCGCTAACA
AGAGATTTATTGAGATATGGTTCGCCATGGAGAGCTGTTGCTTCAACAAT
CAATTTGGAATATAGAAGAATGGAGAAATTCTCTTCTATAACAGGAGGGA
CAAGTATATATGTTACAGATTCATGGATTATAAAATGCTCTACCTACAAA
ATTTACATTGCACAGCAGACCGATTCACATTTATCAGTTGTTCAGAGTGA
GGAATACTTATATAACCAAGAAACAAATCAAAGTgcacagtttttgaaaa
ttaaagtcATGACGATTCCACCCAATGAACAGAGTTTCTTTCTCAATCTT
AATTCACTGGAGTATACCGATTTAAAGGATAGGATCTCATCTCCTTTGAG
ACTTGCCAGGGATGTGATTGTCCATCAAACATTGAGTGACCGATTCTTAG
AGGCTTTCAAACTACAAGTTAGCACTAATGGCGCTCCAGAAGTCATGCCT
AATAACGTAGCTgaACGCGAAAGCTGTATTGGTTGTATGGGTATCCGAGC
TGATATCGTTCTTTCAAAACATTGTTTACCAAGAGCTTTACCACAAGCTG
AGCAATGCCAACAATGTTATTGTAGACCAATGTGGTGCTTGGAATGCATG
GGAAAATGGTTTGCCAGCAGACAAAATCAACAGGAGCCGGAATCTTGGAT
GTCTTCAACTGCGCCTTGCCCTACTTGCCGTGCTAAATTTTGCATGATTG
ATGTCTTCAAAATTTAATTATAATACAGAAAACATTacttttataaacat
ttttttaatgttttataaATGTTAAACTTGTTAGCTGTcttaaaaattgt
atattttggaaattattatttattttatcaaaCAGGGTACAAATTACAGA
ATTCTTTGTCAAATCATTATTTCAAC

Run BLAST on NCBI

transcript from alignment at scaffold_234:282627..294389-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00053839 ID=TCONS_00053839|Name=TCONS_00053839|organism=Clytia hemisphaerica|type=transcript|length=11763bp|location=Sequence derived from alignment at scaffold_234:282627..294389- (Clytia hemisphaerica)
AACAAAGGCCTGCTTCATGACTTTATTGCCCTAGGGAGGTAGTATGATCA
AATTATTGTTAGTGGCTTTTTTACATGAATTTCAGCTAAATTTATCTCCT
TAAGGTAAACTTACCTTTAGTTAGATGTTTTGTTTCAATTAGATGAGCGA
GCGACTTTTTATCTTCCTTCGATGAGACTGTATAGATTTCGCTGTACAAG
ACTAGAGAGATATTTTCAACATTCAAGATGGCGGCCTGTGAGGCAAGAAT
TTTTTACAATTTTTTTAGTTAAAAAGGTCTTGTTTTCATTTTATTCTCAT
TGTCTGGTGATATGGCACCTAATAGTGAATACTTTGAAGTATATTTTTCG
TTTGTATATTTCTTTATTGTTTTGTGTTTTGTTGTACCACCGAGAGAACT
TATTGCAGCAGGATTGACTGTTCAAAATTTATTTAGCAACTATCTTGGGC
ATGAAGACATTGACTTTGTTGGGTATCACTTGAAGAGAACCTCTATCACT
TTGGCAATACATTCATGTTTTCCTTTTCGTAAGTTGGGTTTCTCAGTTTT
TCTTTTCCTGCTCCTGCAGTTAGGAACATTTGGCGAGTTCCTGTACGCAA
CCGCGATCTAAAAAATCATAACAACACTCATTAAAAAATGACGTTCGTGT
GTTTTCGCACTTTTTTTAGCCTAGAAGATGTAGCAAACATAGTAAATATA
AGCACACTGTGCTTTTAATTGGCTGAAATTTTTTTTTGCGTTGGAGAAAC
TTTTTTAAACTTTCAGCTATGATTGAACAAACTGTTACAATAAAAATTAT
CCAGCGCATTTTTTATCTTCTTTTCTTCTTAATCTTCAATGAAGAACTCA
AATTTTACTGAATTTAAGCACATAAGATATTCTTATAATTATTGATATTC
ACTGAAACACCGTTCGTTGTGTGCTGCGGTGGAGTGTATGACGTAACTTG
CGCGGTAAATAACTTGCCTTTTGTTGGAAGATCGTATTGGGCGTTTTGGT
GTTACCACCCTAGAAGCTAGCGGGCGCCCCTGTCTTTCCGCAACTCTTTC
CACCATTTTAGATGGCCATAACAATAGATCTAAAAGGGCGCCATAATCTT
GGAAGATAATTTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGGTCTCCAGCTTTGGGAAGTAGCAATGTTTTTGGTTGTTTTTG
ATGGAAAATAGTAAGAAACTTAAGTTTACAAGTGTCATTTAGTTTTTTCT
GGCTCATAGAATGGCAGGATCCTGGATGGTTTCCCTAACTTTCCTGGCTG
GAGGATAGACCTTTTTTCAAAGAGGACGTCCTGTGACGAGTGACGTCGTC
CTGTTAAATAATTATATAGTCAGGACCCTGCCGACGCACCGGACTGTCCG
GTGTATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTACACCGGACGCAAT
AAGCCCGGTGTCAGTCCGGTGTTGCATAGAGGGAATTTTGGACGCCGGAC
ATTTACGAAACAAAAAAGTTAAGAAACACCGGACGCTCCGGACTGGTCAT
TTCCGGTGTTTTGATTGTCCGGTGGAAAAAAATTACCTTCTCCGACACCG
GACATCCGACTTCCTTAAGGCCGGTGTAGAGATTGTCCGGTGGTAAAAAA
AATTCTCATTTTACACCGGACTTTTGCGTGTCCGGTGTTCGTTAAGTCCG
GTGCGTCGGCAGGGTCCTATGTAGTCCAGCCATAAAAACAATGATAGAGC
CATGCATAATTACTGTACCATGCATATTGTAATGATTATGCATGGTTTTA
TCATTGTTTTTCTGCTGGACTACATAATTATTCAACAGGGTGGCCTCTTT
GAAAAAAAGTCTATAGGAGAGCACTTTTAATCTTTTAATATACCTTTTTA
TCACTTTGTTTTTATTAGACAGGGGTCCTCAACAAAAAACTTAGGAATTT
CTTATTGGCAGGTAAAGTAGCGATAAAATGGACAAAACCATAGTTTGAGC
CACATTGCTTAATCAGAACCAGATGGTTTAAACTATTGTTTTTTTGTGCC
CTTATAATAGACCTTTTTTAAAGAGGCAGCCATGTTGAATAATTATGTAC
TCCAGCATAAAAACAATGATACAGCCATGCATAATTAATGTATCATGTAT
ATTTTAAAAATAAGGCATGGCTGTATATTGTTATTATGCTGGAGTACATA
ATTATTCAACATTGCTGCCTCTTTAAAAAAAGGTCTATGGACAAAACAGA
ACGGTTTAAATTTTTTTTCCCAGAAAGTAAGCGGTTCAGGATCTTAAAAT
TTTGAAGCTATCATTACAGCAACATTTTGTCTTATGTGTCATTTTTTATT
TTGATTACCTAATCTTATGGCTCGCCAAAGCGGAAATAAATACTATCTTT
CATTTTGCGACACTATTTGGAGCTAAACCTTAGCTCAGGTTAATTCCAAG
TCGAATGAAGTACATCCCGCCACTGCACCGAGGCGGCTATGAAATAGTAT
ATTTCGGCTGCCGGTTATTCTTTCCTTCGCCTATATATATCCTACCGTCA
AGCCCCTTTCAGCGCAGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTTGCTTT
TCGTCTTTATAGCCTTTTCGTCTTTTGCTTTAATAAGATCAAATTAAATG
CTTGTTATAGTGGATTTTTGACTGGATTGATGTGTCATTCTGCATGTGTT
TTGATTTTTGAGATGTTGTCATAAACTTTTTGCAGTTTTCAAAATCACCC
AAACATTTTCTGCAACTCTCCTTGTTTTATTATTGATTTAACGACAGCAA
GTCAAAAAGGAGGCTGTTCTCTAACTATCATTTCTTCCATTGTTCTGGGG
ACTGGTCGGTTTTTATTTAAAAATTTTTCAATGGCCTGAATTTATTATTC
TAAACGTTTAACTAATATCCTACATTTGAGGTAACAACATTTGACCTTTT
TAAGCAAGGGTAGTACCAGCAATGCCAGACATCCAGGATAAATTTATCAA
TTCTTTGCTAATGTTTTGAAATTAATCATTTTATAGTGTTGTGTCAAATT
TGATTGATCGATATTCGTTGACTACTATCGGAAGTGTCTATCCTTTTGGG
ACAATGGGTTGAAACTTTATAATAAGGGATAAGAAGACAAGTTTGACTGG
CAGGTTCAATGCTCCAATTTGCAGCCAAATGTTTTGTGACTAAATGCTAA
ACAGGTTTTTTGGAAATACTTGATAAGTCAAATTATTTTCGCTATAGGAG
TTGATGGAGAAAGGGCTTCACAAAATGACTTAGTCATCCAGTATATCTTA
AATGGAATCACAACCTAACTGTAATGGTATGGAGTACTTTGAAATTTTAG
TGCTGTCCTTTCGAGACAAATACTTGCAGAATTTGTATTAAATGCTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCACTTTCAAAA
ACTTCTCATCTTGCCTCCTTAGTCTGCCTTTTTTGTGTTTTTATTCCTAG
GGCCTTATACTTTAATTGCATCTGAGACGTGGGAATTAACTTACATTTCG
TGACACTATCTTTCATTTCGTGACACTATCTTTCATTTCGCGATGGCACT
TCTTGACTTCCACAATAAAGATAGCCTGGGTATCCAGACTCAAAATTTCA
GAAAAAAACACTCTTGCCTGAACATAGAGTATATATATAGAGCTAACTCT
TCACACAAAAATTACGGGAAACGCATGTTTTGACTTTGTACCCTATGCTG
CACTCAAGCACTTAAGCCAGAGTCCCGCAAAGGCGGGACAAAAATCAGTT
TTTTGAAGTTTGCAAAAAAATGCCATACATATGAAAGATCTTCAGTATGT
GAATAGAGCAGTAAAAAATACAACTTTTCTATTTTTCCTTTTTTTTGCAA
AAGTTCTAGGGATGAAAATAAAGGGATAATGATAGTTGAATACTATCCAT
TGATGACCCGCGGCACTATCGTAAAGCTAGAATTGCTTCGCGTACTCTTC
GCTTGAGAAAATGATTGAGCGATTGAAGTTTTTCACCAGCGCAGGAGTTC
GCGGAGCATTCTCGGCTCAATCCTCGGCCCGACTCATTTTGTTTAGAAAT
GAACCTGCGTTTTCATTTTCATTTGTTCATCTTTTTTTGCATGGTCAGCT
TTTTCGCGCGCATCGAAAAATATCACAAACCACGCGAAAATTCTGCTCAG
TGACTGGGCGCGTACTGACCAATTAGAGACACTCGCATATGCAGGGACAG
ATATCCCTGCAGACGAGTTACTTGGACCAGACCGTAAACCAGAGACAAAA
TATTAAAAAAAAACTAGACGTTGAAATAGTTTACGGTCTGGATATCCAGG
GTACAATAAAGATAGTATCCTGTAAAAAAGATAGTATCGTTTCAATTAAG
ATAATGTTTTTTTGGGAAAATAGTGTCGCGAGATGAAAGATAGTGTCACA
AAATGAAAGATAGTGTCGCAAAATGAAAGATAGTGCCGCGAAATGAAAGA
TAGTGTCGCGAAATGAAAGATAGTGTTGCGAAATGAAAGATAGTGTCGCA
AAATGAAAGATAGTGTCGCGAAATGAAAGATAGTATTTATTTCCACTTTG
GCGCGCCATATAATCTGGCATAGGTGAAGTGAAATTTTATTCATAATTGA
CATTCTAACTGGTAGGAATAAGCCTTGGGGCAGAATTTACTGCACAGTCA
AGGTTTTGTGTCCTGTACGTAACAATTTTATTTGATATGCCCTTATCATT
TTTTGTGAAGCTGTTTGAACAAATAAATTGTATTTTTTAATTCGTTTACC
TGTATGTTGTATAGCTTTGAAAACAGTTTAGGTGTGAAGACAACAAAAAA
AAGGTTATTTGTCCTGCAATTGGTCTAATTGGAGACTGTTCTATGTAAAT
GTCCCGTACGTAACAGACACAAAATTGCATAAATTATTTTATAAATAGTT
TATAAGCATTATTCTTATTGCTTTTCTGTATGTCTACCATACTATTTGTC
TAGAAATTATAGCCAAAGTTACAAACAAAACCTGATTTTGAAAATACCTC
AGCTCAAAGTACATGCTGTCCCGTATGTAACCTTGTCCCGTACGTAACAA
GATTAATATGCCCCTGAAAAGTATTTTTTTACAACTTAACGTTGTTTAGA
CACACTTTCTAGGCTCTGATCAGTCATCACTTTGACTCACTTTGTAAGCT
TTCCTGATGAGTGAAGCTTTGATTAAACTCTTTAACACGCATTTTAAAAC
TTCAAGTTCAAGCTTCAATTGATTTTGATGATGTTAGTAGTGCTTATGGA
CTTGTAAAAAATTTCATGAATAGCTCTAAGGTATATATTCTTTCTTTGAA
GTGACATTAAAGAGGGCAGTCCAAAAATTGTTACGCACGGGACATAAAGT
ATGGGTATTTTAAAGATTTTGAGTGGCAATTAGGGCTAGAATCTTTGGGA
ATAGTCTTCAAATATATTAATTCATATATACCAAAGATTTTTTTAAAAGG
GGAAAGAAAAATAAAGGGTAAAACTTCTTAAATTCTGTGAATTCTACGAA
AAATATACAAAAATCCACAAGTTCAACTTAGAAAAAATGGTAAAAAACCG
TAAAAACACCAATAATTGCAGATAATTGCACAAAAAACTGACATAATTGC
TATTATGTCTTTTTCATGTTGAATAATAGTGCCACAAATCTGTACAAATG
CCTTTTTCTTTGAAATATGTTGTGTTACGTACGGGACAATTTTTCATGAA
AGTCGTTTGGGAAAAGCTCTTTTACTAAAAGCACTTAAAAATGCAAAACA
TTTCTAATAAAGATTTTATTATTTCCTTATGTCCTTACCTTGATGTAAGT
TAGCATTTGGCTATGAATTAATCAATTTTGAACACCCTAAGAGTTGATTT
GGGGTAATTCAGCATTTTAAGCATAAAAAACAGCCTTCAATTTGAAATTT
TGAACCAATTTTGTACTTGAAACTATTTGGAAATAATGTTTTTTGATGAC
TTTGATATAGTTGAAGTGAAAAAATATCATTTAGGATCTTCACTTACTAC
AAAAAAAGCATAGCCTAGTTAAATATGTTTAAATGTCTTTGTTACGTACA
GCTACAGGACATTTTTCAAATTTTAAATCTTAATAACTTTTTTTCACTTA
ATAAATTTTTTTTTGCCATTTTTTATGTCTACTTTACCGGCATTGGGCCG
ATAAGCTTCAGATGCCCTCCCCCCTTGCTCTTATCAGCCAAAATTTTCAA
AACAAACTTTTACCTCTTCGAAAACACAATTTTCTCTATCATGTCTGCCA
CCATCGTGTTGATCTTAAACTTGCATTCCAAACCGTCATCGTTGAATTTT
TGTCTATTTGCACCAGCATTGAGTTTGTTCATACCCGCATTGATATTGTT
AATCAAAACAAAAGTTAAAAAGACGCAACATTTTGAAGGCGTCGTGGTAT
AGTGGACATCAACCTTGATTCCTGTACAAGTGACCAAGGTTTGATTGGCA
AGTGACGAACCTTTGCCCGGGTCAACCCATGCCATGTGAGGGGAATTGGG
TAGTCAGTTCAAAGTGTTGACGGGATGCTTACTCAAAGCATCTATAGTTG
CGAGAATGGGCTCTAGAGCCTCCTGTAACTCAACCATAATAGATAGATAG
ATAGAGAGGTAAAGCTGGGCCAATACGCAATGGAAAAGAGTTTTTTATCT
AAGCTAATTCGAAACTGTACCGTCAACTGCTCTAACTTAGGACTATCTGA
CAAAACATGGGACGGCAATTCAGCCACCATTTCACCGAACCTCCAAATTC
ATTTGATTTGAGTTAATGAACGGCGTATTAAAAAGTACACGATTTCTCTT
TCGCACCAAGTAGGCTTTTAAATTGAAATAGGAAAAAAAATCCGCAGTGG
AACACACACGAGTGTCTGTGCACTCTAGGAGGAACGAAGTAGTATGATTG
ATAAACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAAC
AGTAAGTGAAAATACAGGCCAGATATCAACCAGTCCAATGTTTTGGCCAA
TCGTCCCAAGTTAGAATTAACAAATAACGAGTGTGCTGTGACATCAAAAG
CTCCATCGTTTTGCAACTAATATGGTCTTCTTCGTTCCAGACAATCGCGC
ATGTTCCACTACCGATTTTTTTCATATTTCGATTTAAAAGCCTACTCGGT
GAGAAATTGTGTATTTTTGATACGCCGTTCATTAACTCAAATCAAATGAC
TTTGGAGGCTCGGTGAAAAGGTAGCTGAATTGCCGTCCCATGTTTTGTCG
ATAGTCCCAAGTTAGAGTAGTTGATGGTATAATAAAAAAGGTATACCTTT
GATTTTGCAAAATGTTGAAACGAATGCAAACTTTTGAAAAACCCCAACTT
GTACCCTCATAATGTCAAATTGACATTGTGCATAGTCAAATAAATATGGA
GAGGCCCCCTTAAACTCAACAAATACAGCTGCATGTAACTGTAGCATACC
AAGGGCCAGTCTGGAAAGGAGGAAAATGTTGCGTCGGAGGCGTTTTGCGT
CAAAAGGTATAATGTATGTATGTATGTAATAGTTTATTTCCTGTTGACAA
AAAGGTAGCAACAAAGGCTAATAAAATTCAACTCTACTTTACAATTTTTT
TAGAGGTTGTTAAACATTTCTTCTTTTATAGGGAAAAGAACTTTTGAATC
TACAAATTCACCGTTTCCTGAGAAAAATTCACAGTTTCCTTGTTTCTCAA
TGACCAATAATTAAGTGCTACTCTAGGCCATTTTTCATGCCCTTTTAGCG
TCCGGTCATTGGACGCTGTCCCTCCTGAAATCACTAAAATTTTGGTAAAA
ATAGCCTTTTTTGCGGAAAAAACAAAAGAAACTTTCAAGTTTATTTGAGA
TTTTTTATAAAAAATCAAAATAGCAGTCACTTTATTACACTTTATTTTTT
GTTTAACAGTATACTACGTTGGTCTCGGAATATCATCACCAAACTTGAAG
TTATTATACATACATAATTTATCAGGATTTGGTCTTCTATTTGCTCTGAT
TTGCATTGGATCATTTACAGCAGGGCTCCTTATAGCTGTATCCTGGAAAA
TCAGTAATTGGCAATATCATCCGCTAACAAGAGATTTATTGAGATATGGT
TCGCCATGGAGAGCTGTTGCTTCAACAATCAATTTGGAATATAGAAGAAT
GGAGAAATTCTCTTCTATAACAGGAGGGACAAGTATATATGTTACAGATT
CATGGATTATAAAATGCTCTACCTACAAAATTTACATTGCACAGCAGACC
GATTCACATTTATCAGTTGTTCAGAGTGAGGAATACTTATATAACCAAGA
AACAAATCAAAGTGCACAGTTTTTGAAAATTAAAGTCATGACGATTCCAC
CCAATGAACAGAGTTTCTTTCTCAATCTTAATTCACTGGAGTATACCGAT
TTAAAGGATAGGATCTCATCTCCTTTGAGACTTGCCAGGGATGTGATTGT
CCATCAAACATTGAGTGACCGATTCTTAGAGGCTTTCAAACTACAAGTTA
GCACTAATGGCGCTCCAGAAGTCATGCCTAATAACGTAGCTGTGAGTAGT
ATCATTTTATGAGTTTTTTTTCAGAGAATGACCAATTTCCATTTCTTTGA
TTTTGGATTTTAAAAACATTATATTTCAATAGCTGTCTATTTTATACAGA
TTACAAGAAATTTTGAAAAAAGTATGAGGCTTTTCAAAAAGAAAACAGGG
CAATAATTTTTTAGAATCCTGTATTCATTCATTTGATGGTCAAAACATTT
GAATCTCCTTCAAATCTAATAAAGCATGGATGCTAAAAAATCAAAGCAAA
GCTTTCATCTTTTAAATGTAAATATAATGAATAATGTAGTCATATAACTT
TGAAACACCCAGTATAGCTATTTACATTATCCATATAAATAAATTTTAGG
AACGCGAAAGCTGTATTGGTTGTATGGGTATCCGAGCTGATATCGTTCTT
TCAAAACATTGTTTACCAAGAGCTTTACCACAAGCTGAGCAATGCCAACA
ATGTTATTGTAGACCAATGTGGTGCTTGGAATGCATGGGAAAATGGTTTG
CCAGCAGACAAAATCAACAGGAGCCGGAATCTTGGATGTCTTCAACTGCG
CCTTGCCCTACTTGCCGTGCTAAATTTTGCATGATTGATGTCTTCAAAAT
TTAATTATAATACAGAAAACATTACTTTTATAAACATTTTTTTAATGTTT
TATAAATGTTAAACTTGTTAGCTGTCTTAAAAATTGTATATTTTGGAAAT
TATTATTTATTTTATCAAACAGGGTACAAATTACAGAATTCTTTGTCAAA
TCATTATTTCAAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033973	XLOC_033973	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00053839-exon-scaffold_234-1575043694:294352..294389	TCONS_00053839-exon-scaffold_234-1575043694:294352..294389	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1575043694:293862..293953	TCONS_00053839-exon-scaffold_234-1575043694:293862..293953	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1575043694:283399..284030	TCONS_00053839-exon-scaffold_234-1575043694:283399..284030	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1575043694:282627..283040	TCONS_00053839-exon-scaffold_234-1575043694:282627..283040	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1510915933:294352..294389	TCONS_00053839-exon-scaffold_234-1510915933:294352..294389	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1510915933:293862..293953	TCONS_00053839-exon-scaffold_234-1510915933:293862..293953	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1510915933:283399..284030	TCONS_00053839-exon-scaffold_234-1510915933:283399..284030	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1510915933:282627..283040	TCONS_00053839-exon-scaffold_234-1510915933:282627..283040	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1491911889:294352..294389	TCONS_00053839-exon-scaffold_234-1491911889:294352..294389	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1491911889:293862..293953	TCONS_00053839-exon-scaffold_234-1491911889:293862..293953	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1491911889:283399..284030	TCONS_00053839-exon-scaffold_234-1491911889:283399..284030	Clytia hemisphaerica	exon
TCONS_00053839-exon-scaffold_234-1491911889:282627..283040	TCONS_00053839-exon-scaffold_234-1491911889:282627..283040	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_234	supercontig	scaffold_234:282627..294389 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.7575	28.2299	14.434	0.0219441	7.67973	6.36889	2.30512	7.36879	8.97294	12.814	10.553	13.4694	6.89407	12.0261	7.80318	8.85848	13.0524	15.4585	11.6994	8.9634	12.6243	6.9856	18.4431	20.2366	1.9837e-05	1.22074	10.9307	9.07186	14.4496	13.7253

Blast

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BLAST of TCONS_00053839 vs. Swiss-Prot (Human)
Match: TM129 (E3 ubiquitin-protein ligase TM129 OS=Homo sapiens GN=TMEM129 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 7.487e-94
Identity = 140/331 (42.30%), Postives = 205/331 (61.93%), Query Frame = 1

Query:   31 LGSNYLGHEDIDFVGYHLKRTSITLAIHSCFPFLYYVGLGISSPNLKLLYIHNLSGFGLLFALICIGSFTAGLLIAVSWKISNWQYHPLTRDLLRYGSP---WRAVASTINLEYRRMEKFSSITGGTSIYVTDSWIIKCSTYKIYIAQQTDSHLSVVQSEEYLYNQETNQSAQFLKIKVMTIPPNEQSFFLNLNSLEYTDLKDRISSPLRLARDVIVHQTLSDRFLEAFKLQVSTNGAPEVMPNNVAERESCIGCMGIRADIVLSKHCLPRALPQAEQCQQCYCRPMWCLECMGKWFASRQNQQEPESWMSSTAPCPTCRAKFCMIDVFKI 1014
            L S +LG ED  FV +HL+RT+ TL  HS  P  YYVG+ +++   +L  +        LF L+ +   +   ++   W    W  HPL R L  Y  P   W+AVAS++N E+RR++KF++   G  + VTD+W++K +TY++++AQQ D HL+V +S ++  + ++N   Q L I+V +  P  Q+F + LNS EY +L +++ +P+R A  V++HQ+L D FLE F   V  N A  V  +   E E+CIGCM  RA + L K C   A     +CQQCYCRPMWCL CMGKWFASRQ+   P++W++S  PCPTCRA+FC++DV  +
Sbjct:   36 LLSGWLGSEDAAFVPFHLRRTAATLLCHSLLPLGYYVGMCLAASEKRLHALSQAPEAWRLFLLLAVTLPSIACILIYYWSRDRWACHPLARTLALYALPQSGWQAVASSVNTEFRRIDKFATGAPGARVIVTDTWVMKVTTYRVHVAQQQDVHLTVTESRQHELSPDSNLPVQLLTIRVASTNPAVQAFDIWLNSTEYGELCEKLRAPIRRAAHVVIHQSLGDLFLETFASLVEVNPAYSVPSSQ--ELEACIGCMQTRASVKLVKTCQEAA---TGECQQCYCRPMWCLTCMGKWFASRQDPLRPDTWLASRVPCPTCRARFCILDVCTV 361

The following BLAST results are available for this feature:

BLAST of TCONS_00053839 vs. Swiss-Prot (Human)

BLAST of TCONS_00053839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TM129	7.487e-94	42.30	E3 ubiquitin-protein ligase TM129 OS=Homo sapiens ...	[more]

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TCONS_00053839 (transcript) - C. hemisphaerica