XLOC_034108 (gene) - C. hemisphaerica

Overview
NameXLOC_034108
Unique NameXLOC_034108
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_238:14115..20809-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034108 ID=XLOC_034108|Name=XLOC_034108|organism=Clytia hemisphaerica|type=gene|length=6695bp|location=Sequence derived from alignment at scaffold_238:14115..20809- (Clytia hemisphaerica)
CAGACTGTCAACAAAGTGTTGAAAAACTTTATACTGTAAAACTTCGTGGA TAATTTAGTTTGTATTTCTCTTTCTCTTTCAGAAAAATATTTATGTGGTT TGTTTAGTTGTTTGTGGAGTAGCTTATTGTGTAGTGTAAAAAGCCAAATG TATTATGACTATTGATATGACAGCATCAACAAATAATATTGGTATGGCCA AAGAGCCAGAAGCTTGTAAACTGTTTATTGGACAAGTACCCAGAACATGG ACTGAAAAAGAACTGAAACCTATATTCGATCAATATGGTGAAATACATGA CCTTACTGTGCTTCATGATAAATACACTGGTCAACATAAAGGTTATTATT GGAATTACTATATAAAATTTTGGCCAATTTAATCTAATTAATGTGTTGCA CTTTCAAATTCTGTAATTCTTGTGTTGTTGAATGATATCCTGGCTGGATG ACAACACTGCCAACGCACTGAATTGCCTTGTGATTTTATCCGGTGCTGAA TAAAAGTATTTAAATTTCACCAGACAAAATTGTGTTACAGTTTTTTAGGC CGGCCACACNAGCGTTTGGAAATTTTTCCCGCTTACATCGGAATTATTAG TCAGGTAAAAAAGTTCAGACTGTCAACAAAGTGTTGAAAAACTTTATACT GTAAAACTTCGTGGATAATTTAGTTTGTATTTCTCTTTCTCTTTCAGAAA AATATTTATGTGGTTTGTTTAGTTGTTTGTGGAGTAGCTTATTGTGTAGT GTAAAAAGCCAAATGTATTATGACTATTGATATGACAGCATCAACAAATA ATATTGGTATGGCCAAAGAGCCAGAAGCTTGTAAACTGTTTATTGGACAA GTACCCAGAACATGGACTGAAAAAGAACTGAAACCTATATTCGATCAATA TGGTGAAATACATGACCTTACTGTGCTTCATGATAAATACACTGGTCAAC ATAAAGGTTATTATTGGAATTACTATATAAAATTTTGGCCAATTTAATCT AATTAATGTGTTGCACTTTCAAATTCTGTAATTCTTGTGTTGTTGAATGA TATCCTGGCTGGATGACAACACTGCCAACGCACTGAATTGCCTTGTGATT TTATCCGGTGCTGAATAAAAGTATTTAAATTTCACCAGACAAAATTGTGT TACAGTTTTTTAGGCCGGCCACACCAATCACCACAAATAACTTGTGTTGT GTCGTCTGACCATCTGATAATTTTTCTTAATTTTCCAATTATTTTGAGTC AAGAAGTTGCAAAATTGTCGGAATTTTATCCAATTCCATCCCACCCGCAA TCTTTACATCAATCGCACGTTTCATTGTTTTGGGCCATTCCAGAAAATTT TTGTTACCCCACGTCAGACGACGTGCATTTTTTAATTTTTTCTAGCCTCA GAAATTTTTTTTTTTCCAGTGGTGGTCGGAAATTCCGATAAAAATCCATG TACTTTTGCAAAATGCATCGGAAATTCCACTCTTTTTTGCCTTTTTTTAA TTCAATTGCCTTGGAAATTCATACATTTTCTTCTCTCANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCTCACCTTGGAAATT TCGAATTTTGGTGAAAACTTTTGCCCTCGGAAATCCTGTGTCGTCCGCCC CCCTGTTACAGACAAATTCTGGAATGGCCCTTTACGGAAGAATTTTATTT ATAAATATAAACAGAGATAATATCCAATCCTTTCCGTGAACGTGTTATTA TCTCCTTAGTCATAAAACAGAGATACCATATTTCAAAAAAAGAGGGGCTG TATCGTGATCACATGAAATCCAAGAAAGGGCCACAGTTGACGGACCGTCT ACATAAACAAGAAGACAGTGGGCCGTTTATTTTCAATTTTCGATAGATTT GATTTCTGCCTGATTGATAGTTTGAAAATCCATTTTTCCGACGTTATTTT CACTGACCGAATCTGACCGAATGACTCCATTTTTATTGCCTAAAACGACG CGAACACAAGTTATTTGCGATTCTGGCCTTACACCAATTCTTGACACCAG ACTTTTTTGTTACTGTTTGCGCGCTCATTGGATTGATCCACATCCATGTG CCAGGTTTAGATTGTCCAGAGATAAAAAGTTTCATCCTTCAACACTTGGC ATTAGGATAAGCCTGGTGCTTCAGTCTGTTGTGTTGGCAGGATTGTCTAT CATGCAAAATCATTTTGCCAAATTGGTTGCAGTCAGATTGCATAGGAAAA TATGCAAAACCTATGCAAAGAGAATAATCAGAATATTATTAGCATTAAAG AAAAGCAACAACCTAAACTCAACTGCTTGACTTTTACCCTTCTTGACAAA GAAATAATCAGAAAAAAGTGTCACAAGAGCCTTGGGTCTTGAGAACTGAA AATTGTTCAGTAATTTTATGAATTTCACTGCTGGTTTTTCTTCTTTCATA TCTATAATTTATTAAATTAAAGTATTTTTTTTTTCAGGATGTGCATTTTT AACATACTATGAGAAAGAATCAGCCCAGCAAGCACAAAATGAACTTCATG AAAAAAAGACACTTCCAGGGGTAAGAATTCTGCTCAGGTTACAGTAATAT TGTCCATTATTTTAAGATTGATAATATTATAAGATATATAATATTAGTTT GTACACACTTTTGAATCTTGAAAGGTATATACAGTGACAATATTCATTTT ACTCAAGCAGGTTCTACTCTAACTATATCGACTTTCTTACTTATCTTCTA GTGTGGCCATGCAATGCAAGTCAAACCTGCAGTATCAGAGACGAAAACTG AAGATAGAAAATTATTCATTGGAATGTTATCCAAGAAATTAAATGAAGAA GACCTAAGAGTTATGTTTTCCCCCTTTGGAACGATAGAAGAACTGACAGT TTTGAAAAATCCTGATGGAACTAGTAAAGGTAAAATTGTTTTGTTTGTGT CTGTTTTATTTACAAGGTTTTTTTTCAAAATGTGGTCTAATGGACCCTGT TGGGTCCTTTATGACCCTGTCTAATGGTGGTATATCTCTGATCATTCTAG AAAATTTAATAACATTTTTATTAACATTGTAAATGTTGAAATGATGAATG TCTTCTTTTTTATCTAGGTTGTTCATTCATCAAATATGCAAACAGATTAC AAGCACAAAATGCTATTAGAAAGTTGCACGGCTCTCAGACTATGGAGGTA TGAATTCTTCATTGACTCACTAATTCCAACTTTTGCAATAAGTTGATATA CTAAATCTAGCTTTATCTTACATTTTGGTATTGAAGAAATTAGATTTTGA CTGTAGGTATTTTACTTTACCCTTTGATCAAATATGTATACATTATTACA ATCTTTTCAGGGATGCTCTTCACCTCTTGTTGTTAAAATTGCTGATACAG AAAAGGACAAATTGCAAAAACGTATGCAAGCTATGGCAACTAATTTAGTC GGACTTGGTATGACAATGAGCCAATTTGGAATGCCTGGAGGCTTAATAAA CAATGCATATCCTAATGTAGGACAAAATAATGCATATCAACAACTTTTAA CACAAATGGCAATGCCAAATACACCTGTTCCAGCTCAGCTTGTTAGTAAT CCTGGATTCGCTAATATGAACAATAACACTTTACCAAATGGTGTCAGTGC TGCTCTCGTGGCTGCAATGGCAAACCAGCAACAACAACAATTACAAGGAC TTACTCAAACACAACAAGCAAACTCTTCACTATTCAGTTCTAGTATTGGT CAACAGTTACCTACAAGTAGTTTCACCACGTCACAAAGCGCAACAAATCC ATTAGCTAATAATGGTTTGTCTGCTCTTCAAACTAACATATCAGGTATGA CATTGTTTGAATTTTGAATTAGATAAGATTGATTCAATAATGATTGAAAA ATGTTAATAAACAGTGCTTTAGTATAGAGGTAGAGTATTGGGATATGCTG CATAAGGTTTTTGGTTTGATCTCCAGCCGGGCAAGTGGTCATATCAAATA TTCCCAAAATGGTCCTTGATGCCTCTCTGCTTGATGCTCAGTAACTAAAG AGAAGGGTCAAGAGTAAGTAAATAAATCCTGGGAAAAGAGCGGTATCGCC CTGTGGTTGCAACTTTCTTTCTACTATTAATAAACCTGAATAAACAATTT AACTTAGTTAAACAGGGAATGTAAGCAAGCTCCTTTTGATTCTGTTTGAT TTAACAATTTATATGAGACAGAATGAGTTGGGGTATAAGCAGATAAAGCC TAAACTCTAGTACTTTTTTTCCCTTAGGAGCCAATTCTATTGCTAACCTT GGTGGACTAAACAATATGGCTAATCTTGCAAGTATGACAGGTTTAAGTTC TACTCAAGTTGCAGCAAACCCAGCGGTAGTTGCTGCTGCAGCAGCAGCCT CGGGGCCACTTCAAAGCCTCCCAAATATTCCTACCTCCAATGTCAATAGG GCCNATTTGGAATGCCTGGAGGCTTAATAAACAATGCATATCCTAATGTA GGACAAAATAATGCATATCAACAACTTTTAACACAAATGGCAATGCCAAA TACACCTGTTCCAGCTCAGCTTGTTAGTAATCCTGGATTCGCTAATATGA ACAATAACACTTTACCAAATGGTGTCAGTGCTGCTCTCGTGGCTGCAATG GCAAACCAGCAACAACAACAATTACAAGGACTTACTCAAACACAACAAGC AAACTCTTCACTATTCAGTTCTAGTATTGGTCAACAGTTACCTACAAGTA GTTTCACCACGTCACAAAGCGCAACAAATCCATTAGCTAATAATGGTTTG TCTGCTCTTCAAACTAACATATCAGGTATGACATTGATTCAATAATGATT GAAAAATGTTAATAAACAGTGCTTTAGTATAGAGGTAGAGCATTGGGATA CGCTGCATAAGGTTTTTGGTTTGATCTCCAGCCGGGCAAGTGGTCATATC AAATATTCCCAAAATGGTCCTTGATGCCTCTCTGCTTGATGCTCAGTAAC TAAAGAGAAGGGTCAAGAGTAAGTAAATAAATCCTGGGAAAAGAGCGGTA TCGCCCTGTGGTTGCAACTTTCTTTCTACTATTAATAAACCTGAATAAAC AATTTAACTTAGTTAAACAGGGAATGTAAGCAAGCTCCTTTTGATTCTGT TTGATTTAACAATTTATATGAGACAGAATGAGTTGGGGTATAAGCAGATA AAGCCTAAACTCTAGTACTTTTTTTCCCTTAGGAGCCAATTCTATTGCTA ACCTTGGTGGACTAAACAATATGGCTAATCTTGCAAGTATGACAGGTTTA AGTTCTACTCAAGTTGCAGCAAACCCAGCGGTAGTTGCTGCTGCAGCAGC AGCCTCGGGGCCACTTCAAAGCCTCCCAAATATTCCTACCTCCAATGTCA ATAGGGCCCAGCCTAACATTTCTGCAGAGCAATGGCAAACTGCTTACTCA GGAGTCGAGCAATTTGTTGGTAAGACTGTCAAACAAACAGTCTTATCAAG TGCATAGGAAATGTGTCAAAAACTTCTTGTTTATTTTGAAGATTTATCAT CTTTGTGTTGTTGCTTTTCATTTCTTTCTGTTTTGTCATGTTGTTTTTAT TGTATGTTATAAATTATGTGTGCACAAGAAGTTGGGAGTTGCGTGCAAGA AGTGTGGAAATTTTAAAATATTGATTTTGCATTCAAGCTACTTTTCACAT TTTTGTTCAGCAACTTTCATAATGTATGTCATTGTCTTATGCATTTGATA AGTGTTTGTCTTTGTCCTGTTTTTGTCTAATTGTATTGATGACCTTCAAT GACCATTTAAAAAAAAGGAGGGATGTGTAAATGATTTCCCTGTATATTTA AAGTAGATATTATTCATAGTTCTAGATGAGGGTTGATATGTATCATTTCC ATTATATTTCTGCTACTTCAACTAGCAATTCTTATTTGATCATGTGAGAA TTATGCAAACCTATACTTTCTAATGTTGACTCTTTGTAGAGCTTTATTCT TTAGATTTTTATGTGCTTACTTTGAATTCGGTATTTCTAAATCTTGTTTA TTTTTAATTAAAGCTGCACTTCCACAAGCGTATCAAAATTTACAAAGGCA GAATGTCGCACAACCCCAAAAAGAAGGTTAATTGTTATTTTGTCTGTTTT ATTTTGAATGACTTTATTTTTCTATTTAAAGTTAATTGTTATTACTGGCA AGAACCTTATTGATCATGTTGATTTTTATTTGCTTTCAGGTCCTGATGGT TCAAATCTGTTCATTTACCACCTTCCACCTGAATTTACCGATGCTGATCT GATGCAGACCTTTATGCCATTTGGAAATGTTCTCTCTGCTAAAGTCTTCA TTGACAAACCTACGTTGTTGAGCAAATGTTTTGGTAATTGTTATTTTATA AACACTTTATTTTTTTGTTGATCAGATGAAATTAATAGTTTGTGAATAGC ACTCATATTTTTTCATTGTGTTACTTGTAAATTATCCTTTTTAAACTTTA GCACATGTATCATTTTGTAACTTGCAATGTTTTGTAATGTTTACTTTTTT TCAGGTTTTGTCAGTTTTGACAACCAACACAGTGCCAGGCAAGCTATTGA AGCAATGAATGGATTTAGTGTTGGTTCCAAGCGGTTAAAGGTTCAGTTGA AGCGACCAAAAGACCAAAACAAACCATATTAAAAAAACATGCATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054036TCONS_00054036Clytia hemisphaericatranscript
TCONS_00054035TCONS_00054035Clytia hemisphaericatranscript
TCONS_00054034TCONS_00054034Clytia hemisphaericatranscript
TCONS_00054033TCONS_00054033Clytia hemisphaericatranscript
TCONS_00054032TCONS_00054032Clytia hemisphaericatranscript
TCONS_00054031TCONS_00054031Clytia hemisphaericatranscript
TCONS_00054030TCONS_00054030Clytia hemisphaericatranscript
TCONS_00054029TCONS_00054029Clytia hemisphaericatranscript
TCONS_00054028TCONS_00054028Clytia hemisphaericatranscript
TCONS_00054027TCONS_00054027Clytia hemisphaericatranscript
TCONS_00054026TCONS_00054026Clytia hemisphaericatranscript
TCONS_00054025TCONS_00054025Clytia hemisphaericatranscript
TCONS_00054024TCONS_00054024Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054032-proteinTCONS_00054032-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_238supercontigscaffold_238:14115..20809 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.12 10.66 17.01 18.67 131.77 112.36 247.14 264.86 144.05 154.37 135.31 92.26 77.97 61 38.81 49.29 80.73 89.72 56.36 73.46 81.42 74.18 24.47 37.52 57.27 64.88 57.51 42.88 39.65 39.9