XLOC_034196 (gene) - C. hemisphaerica

Overview
NameXLOC_034196
Unique NameXLOC_034196
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:513815..517385+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034196 ID=XLOC_034196|Name=XLOC_034196|organism=Clytia hemisphaerica|type=gene|length=3571bp|location=Sequence derived from alignment at scaffold_242:513815..517385+ (Clytia hemisphaerica)
ccattcaaaatattttaaagtttgTATTTCATTATTCTTTCAGCGTTATG CATGAACAAGAAAAAGATAATTGTATTTTAGCTTTACAAAATATACCTAA AGGTTGCGAGGTTGGCATTGACTATCACTCATGGTATGTAGGTGAACGTT TCAAAGGTATCTCCAACATACCCCCTGGCATTCATTTTGTCTTTGTTCGA GTCACAGACAAATATGGTGAAATGGCGCCTCGTTCTGGTTTCTTTGTTTA CATGAATCCTGGGGAGATTATCTCCAAATCTTTTAAACAGGACGATGAAG AATTTGAACATATCCAAGACAATATTCCAATTGATGGTATGAATTTTCAC AGTTAATAATTATGTTATTCTTATGAATGATTCCTTGGGAAACAAGATAA TTTTTCACGGTGCTGGAGATTGTATTCacattatttattttctttactgC CCTGGTTTTAACTCATCTTTGATCAGATTTTCAGCATATAGTGGTAAATG GCATCACTTCTCAATGTTGGTCATTTTGTAATAAGAtgcatttttcttta aaaagatgACCCACATCCAGTAGTGTCAACATTAAGGGCTACCATGAAAG AGTAAATTGGTAGGCTGGTATTGAAAAACTGCCTCTTTTAACCCATTTCA TGGCATCACTCCGTAATTTGATTCATTTGATTTAAAATGTGCGTATATAC AGTCCAACtatgaaaaaaatgttaatCTAGACTTTTTATTCTAATGGGGC AGCATGCGTTGCGTTGCTCCTACGTCCAGACCTATCAGTACACCCAAAAA ATTGACCGATCCCATATGATGCGAGTGGTACTTAAATTGTTTATCTAAAG CTCATTGGTCGTTAATTTACCTCTTCTGCATTTTAATTATCACATTGTCA TTGTGtaaatagaaaacaacatgGTGGGCAAGTCGACTTTATTAATGGTC ACACTTACATGGATAATCTGTAAGCAGTTATTAGCCTATAGTGTAAAGGA ATATGATATCTGTGTATTAGCCAACATCCTTcatattatgtttttttata gagATGATAGGACTTTTGGCTCAAATGGCACCCTATCCATACAAAGAATG TCAACTATGGTCACAACTTACGTTTCACGTGTCTTCACCCTTATTAAAAC GTCTCCAACCGGCATCAAAAAAGGTTTGCTCATACACCGAAGTAGCTATA GAAAAAGATAAAGTTACAGCAGGGCGTTTAGGTCGAATGTTGATGAAGAC AGATACACGGACTATTGAGTTAGAATCTAATGATGATGATAATCGAATCA ATTTTACGAAGGTTCCGAAACCTGAATCAATGACTGGACCAGATTTGAGC AAGAATATCATGGATTCAAGTGTGTGCTTGGAAGCACTGATCAAAGCTAT CCCAGAAGGtttgagttgttttttttcatcgtTGGAAAAGAGAAAGACGT TTTGTGGATCTGAGATCAACGACCTAgaacttttttctttcattcaCAGT GAGAACAGAGAACATTTATTATGCTAATTTTCTTTTCACGTCTGAAAATG TTAAGTCATTTTATGAAGTTTATGCAGGTTTATGGTGCAATGCTTGGGAT ATAAGCTTAGAAAATTACTGCCAGTGAGCAACATCTTTACAATattattt caatcttttttgttCAGGTGAAGTTGGGCTACTGGGAGAGATACAACTCG CTTACGTGACATTCATCCTCGGTCAAGGTTTGTGATTCCCCAAGCAATTT TGAGCACTTGTAAATCAGACTGGTCTTTAGACGGTCTATCAAGGGCCGGT GAATGACTCGTAATTTACCAAAAGGCAGCTATGAGTCCAGTCATATAGCT GTTACCAACAAATACTAAAAAACGGCCAGGGACGTTTAAAATTAGATGTT AAGAAGATGTTAAGGCCGATCTAAAACAAAACTTTGACCGCTACAAGACC GCTCTTAGTACTGTAATATTTCTTTGGGAGCCACTTTTGTGTATATGAAT GCAAGTATGAATCATTCCATTAGGGTCATAACTTTCCACAATCCAGGGAg caagagtggcgccctcccctaccttcggttAGAAAGCTATCGAAAAAGGA GTCTTCGGGTGGCCTCTGACTGCGgtcacagacttacttactttctTCTA TGCCTCCTTTTATTTATGACTACTTTGAGTCCTAATAACTTCAGTTCATT TTTTATATTCTTAGTTTATGATGCATTTGAGCACTGGAAACAATTATTAT CGCTTATTGGAGGTTGCATGGTCGCACTTACTAAAAGAAGctctttttat gaaaagtttatCGGTATCAGTCAAAttatttgttactttttttgTGACAC CGCTTTTTTATGTTATGACCAGACCCCTCAAAGCgtttaacttattttta aattttggtgattgattcatttcaattttagaCTACACGACTtttactac acgttttttttatataaggaacacgtttataaggaactcgaggctgaaaa tggtccaaaaaataaggaattgtttaggaactgctaAGGAACTGctaagg ctgagaataagaaaagcAAGCAAGttaactttgaggctgaaattctctgt aaaaataaggaactccaggctcagagcaaagtaaaggttccttataaaaa aaacgtgtacctgaCAAACGACAGTAAGTTGTTGAAGCGTAAGCTGTGAT TTTTCTGTGTTTCCAGACAAGGGTCCAAACCAAATCAGCATTTAGTGCAA TTCTGAACTCATTGATTGATTgacctttttcatttttcactctCATAGAT GTGATCGGACTACAGCTTGACGAAATACCTGAAGACTTTTTCTTGGAAAT CAATCCTCAAAAGAATGTTATCTTCCTGATTTTCCAGGtacgaaatattt ttaaattagcTTTTAACCCCACTTAATTCTGCTCTCTAAGTAAAACAAGT AGCACTTTCTTAAACATGAAATAACTAGCCCTGTTTGTATTCAGATAGCA GTATTCAACATGCGACATCTTTATGTCACTGTACTTTTGGAATTGATCAA TAATTAAGTGTCTACTCTCATATAAAATATATAGATACGGTCAACTTTCT CTAGCTCGAATCTCTATTATTATTTGAATATTAATTCGattaaactaaaa tattggtcccctcagctggaaagtggtttactctctgtaattcgaatcct tCTCCGAATCgaataaagttttttaaaggtcccttgaagatcgaattaga ggagggacaactgtagaaaatttcaaatctgaTCTATAACCTCAGCTTTT ATTTTGTTaaggattttttccaaaatctaaaCGAATGTGACGATTTGACA AATGCCTTATTAAAGAAGTCTTCGATGATGAAAGAACGTCTCTTTCAGCG TTTTCATTGGGAGTTCAACGATGTTTTGGAAGACGAAATGCCTACTATTG TCGAACTGTAATAGTTCATGGTAAGAGattaatttttaattgttttttta tacttcaaaacttttgtatatttttttccatATCACTTTTTATTGCAAGA ATCATCAGAAATATTAAAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054213TCONS_00054213Clytia hemisphaericatranscript
TCONS_00054214TCONS_00054214Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054213-proteinTCONS_00054213-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:513815..517385 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AAR2PREDICTED: protein AAR2 homolog isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.96 35.91 18.44 15.68 16.35 13.29 16.53 15.96 14.4 12.56 8.75 10.59 6.62 7.78 7.69 8.73 13.69 12.66 3.04 3.69 6.41 6.12 24.44 21.11 14.02 17.01 5.16 4.19 11.91 13.02