XLOC_034219 (gene) - C. hemisphaerica

Overview
NameXLOC_034219
Unique NameXLOC_034219
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1092640..1098293+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034219 ID=XLOC_034219|Name=XLOC_034219|organism=Clytia hemisphaerica|type=gene|length=5654bp|location=Sequence derived from alignment at scaffold_242:1092640..1098293+ (Clytia hemisphaerica)
ATCTACTCAAGAACTGAGGAATATGTtaagagaaaataaaaagtctCAAA ATGAGGTTATCTTTGGTTCTTATTGCATCGGCATTGGTTGTTGCTGTTTC AGCAGGTATAAATCTAAACTTTGATAAATAAAATGGTCGAGGATAGATAG TTGTTTACCGAGTTCTTTAGGCTGCAAACAAAATTCCCCAGTTAAAGGCG CTGCTGACTAGGCTCCGAACTTAGCTGACGGAGTTGGGAAATCAGTAGAT CACAAGTATCTCTTACAGGGTTGACTTTTGGTCATTTCGCCTCTTTTTAG ATTtggtttaagaaaaaaaattttttttgcatccgCCAGAATACAAATTT TGTCAATCAGGATGAAAATTATAGTCTACAACAAGAaccaatttttgtta aaaactgATATCTGACAGGATCAATTTATTGAGCTTTAACGGACTCAGTA TTCAATCCCAGCGCTCGATTTAATCAACTTTTATCGAAATTTGTTCTCGC TTTAGGATGTCATCAAGACAAGTCCCAATTTTGCTCGGGATGGAAATTAG TTGGATATTGCAAGAGAAGCAGCAAACATCACACATGGATGAAAGAACAT TGTGCTGATACGTGTGATTTTCCTTGCCCTACTACTCAACCGCCAACTTC GGGTAAGAACTACAATAAACAGTTCAATTTTCACCCAACAGACTCACACA GACTTTTTCTGAAGGGTCTACTTCttttgaagcatttttatttttacttg ctatacacccctgtgtcacagacccgatgGGACCCCAGTTCCATTGGAGA ATTTGGCCATAAAATACGTCCCCGGTGGGATAAATAGCCTACTTTTTCAG CCATACtttgaaattgactttgatttcatccccaattaaaattcaaaagg aaaaattgcacttcaaaatcatccccactggatttttttaaccTGAGAAC AATAGGATTTTTATCCCCCAATGGGATTTCGAAAGAAATTGTCATCCCGA ATGTGGGAAGAAGTTTcgccggggctgtgagacaggggtgttgttaTATT GATatcagttcttttgtttttgtctttGGTGGGCCAGgcattatctggca cccagatggtgaaattttcatccgacacgctaaagctctgaaggtcggga aaattttcaacatctggaaggttcacatacggaattttgcaagaccgcaT CAAGAATTTTGAAGCGGAAGGTCTGGTatcccagccctcgttttcgagga ttggcgggtccaaccaaaTTATATTTTTAGGTTTACGGGTAAGGGTTTTT GAAGCCGACTGGGGacgcggcacatcaaaggccgactatcattcctctcc gatgggaaattggcccgctccctttaaagctttagcgtgggcggccgcca atctgCCATCAGAATATCCGATAAGGCCAGGCATGGTCCTAAATTTTACC AACCCTGTATCAAGACTGCTTGACTCTTCAATAAATACAACGTTTCAACA TCTGATTACCACCATAGGCTGTGCGGATAAAAATGAAGcatattgcaaaa aatatgcTCTGTATTGTTTCCGTGATGgttggaaaaattatttgaaagtt CAATGCCCCAAAACTTGCAAGGCTTGTGGAGGTAGGTTATGATATCACAT ACTATTTCATATCGAGTACTTTATTCATTCTGATAACATCTTCTAAGTTT ATAAGTGATTCCTAATTATAAATGTCCTTCTAATCACCCTTTGTCAGACT ATATAGACACCAAACGATCTACAGCATATAAATTCTATCAGGTAGGATGA CAGTAGGTCATGGATGACCTTGCTATttcctttattttattttttaggtg CAGCCACGACCCCACAAGGTCCCCTACCAACACAAGCATCTGGACAATGT GGAGTCAAAAGCGATGGTCACACCCGTATTGTTGGTGGTACTAATGCACG ACCTGGTGATTGGCCGTGGCAGGTACATTTGAAGACATAAATAGATATAG AAAGACATGAAAAACAAAAGGACCTTTTACCTCAAGGCAACCGATTTCCG TATTAGAATCCaagttaaaaatgaaaatatgttaatcacggaactaattt tcgtgaaTATTGAACAATTTTGtctaagtttttgaaaatagcTTTGACTT AGCTACTACGACAGTTAACAAAATGccgtaaaaagtaaaaatcaatcATA CCTTCACCCTTTCttatgataaaaaaatcaaaggtttgattaaagtctat tcacgataagtgtgcactcttttatcttttacctagaacttttgaaggaa ttctttaatctttataaaaatagtatcattggaaagatattagtgagtgg aacaatttataataaataaagaaatatttagaaaaattctaaaaatgaag atgaaaacgaagaagaaaaaaatgaagatcactgtgaaaaaaattctcaa aaattctcattcagtcaaaagatatcaaacaaagttataagctgattgac gtctaaaaatgctgttttctgctgttttctgatgttttttggggtcaatc acttattaactttgtatcataactttatattgaataaatattttagttaa attttttcacagtgacgacctcctaagatcaaagaatctctccagtgaaa atgaaagttatagcacttttctacaagatcttcttttttttcttcttcat tttcatctttgtttttagatttttttccgagatttttttatttcaaattg ttccactcactaatatctttccaatgataccaaatttgtaaagattgaag aatgccttcaaaagttataggtaaaagaaaaaagagtgcacacttatcgt gaatagactttagattcGTTATCTCCCCAAAACCTATCAAGTTTTAATCT GATAATAAATCGTCCGAGAATTAACAAATCCAAGGCAAGGGGCATTCATC TTTGAATCTAATCTGAGCCGCAGACTTCCTgtataagaaactcttttcgc tagagAATGAGCAGAAGTCTACTTAAAATCGGGCTTCTATGactgggctg ttccattaaaaagccatacaggggggtggacgaaaaTCTTCAAGAATaag ataccccctggaaaatggtaaaatttgcaaaaatacgcTTATaaagattc ttttcataccttaaaatgagggtggacgaactaaaatcagtcttttctcc ctggaaattttagaataactttttaccccccttGGGAGAATGAAAAGACA CCCCTGGAAATTCTGCTTGAATtgccccctggaaatgttcgtaaACCCCC CCCctcctgtatggatataaaatggaatggcccattcttCTTTTATTACT AGGTGCAAATCGATTTGAACACTGACTGGGGGCGTTATTGGTGTGGAGGC ACCTTGATCAATGACGAATGGATTGTCAGTGCTGCTCATTGCTTTGAAGA TGATACCAGAGCGAGAAACTATGACATCTATTTGGGTAAGCTCCGCATAA TGTCTTCCTCTATATAATTTTTCAAAGCAACAACATTTTATGTACAgtaa aatgtatataaaatgATCGATATGGATATGATATCTATCTATCTTTTACA AGAAGTAAGCCTCTTACAGCCCACATTGGGAGTGGGGAGACTGAATACCA TGAGTATTACAGTGTATGAATGAGCCCCATTAATTCCAGGATTTAGTCTG TATCCCCCTATATTGAGAGGGTGTGACATCCAGGGTAATAACATCTGGAA AATATAAATCCAGGGGTctggtttttcgagtgtaaaaatccagggtggta aGTAAAATAAggtggaaaatccagggtggtcagtaaaatgagctTCAAAG CCGGGTGGTCAGTAAAGGAAgtcgaaaatccaggttgaCCATAAAATGAG TAAAAGAAATCCAAGGAGGTCCGGAAAGATTGAAAAATAAGTACCTTTAC caaaaagacctcctcaacacAGGTGgtacatttttttctggaatatcCCA ATATTACACTGTGACGACAAATGAGCATTCAATTTAGCGCGTTTTCAGCA AATATAAAAGTAACAATAGCAATCATCCAGTATCTTAGATGAATGCCGTT CTAATCAAATCACAAataagaaacaaagaaagattcAATCAAAGAGAGCC GTCTTGGAAGATATTAAAAAACTTAAGTTTTGTGAAAAGTGCaccatttt ctaaaatttctttcTATTCTTCTTCTGCTCTGCATTATTTTAACCGTCTT TTTCTTCCCTCCAAAAAACAAGATTCGATAAAGGCTAGCAATAAAACTTC AATACCTTTTTTACAAGAGGGAGTTTTAAATCACTTTTTTAAATCCCATT CCCTACATACAGGTGAGCACGATATCCGTAGCAAAAGTGGCAACGAACAG AAAATGGAAGTCGCTGAAATCATCATGCATCCTGGATATAAATACGGAGA TGTTGACAACGATATGGCTCTCATCCGATTGAAAAAGAAGGCTTCATTCA ACACTTACGTTCGCCCAGCATGTTTCCCCGATTCATCTGTAAAATTTCCT AGTGGTGAAGAATGTTACGTGACCGGATGGGGAGCTCTTAGGACCGGTGG TTCATCACCAAGAGTAAGTGCTGACGAATGTACCGAGCTTTATAATTAAC TTAGTTTTTCGCCGAAAACTGAATTAAAGGGAATTAGGGGTGGGTTTACA TCTGAAGGGGAGATTCGATTGAGACACCCTTTGTCGAAAACAATGAAGaa cataaataaaacaaaagatcaAAATGGCTTGAACAAATTCTTTTATAAAG TTAATCGACCTACCCCTAGTTATAGCAATTTTTACAAGAGGTTGGTTTGG GTATCTCTTATGAGAAAGGACGTAACGAGGAGAAGATCGATTAAGATTTT GTTATTTATCGTATTATTTCAATTATATTTCTTAATCGATTCTCTCCTAG ATGTAAACCTACCCTAGCATATGGACATGCTTACAGTAAGAAAAACATAA TGACTTTTAAACCCAGATAAACTCGTACCTAATTCCCTTTTGTAGGGTTA GAGTAAAAGGTACAAAGTCACAAGAAGATGGTGATGAAATCAGTTTAGGT GACTTCTCTGTCGTATGCTAGGGACCTGTTAGCAAGTGTGACCGCATTAA CGAATTAACGAATGGTTTTATCTGGGATTATCTATCAGCAAGACTGAAAT ggatttgattttctttcattCAATAGATCTTGCAACAAGCCAAAATTCCG CTTGTTCCACAACACGAATGTCAAAGAGCTATGGGAAGCGATATCACAAA GAACATGTTCTGTGCTGGATATGCCAACAAAAGAATCGACTCCTGCCAAG GAGATTCCGGGGGTCCACTTGTCTGTAAAAAGCGAACTTCAACTGGGCAA GATGTTTGGTATTTATGGGGAGTCGTTTCATGGGGCATTGATTGTGCGTC ACCAGGATATTATGGTGTCTACTCCAGCATTGAGAATATGGGATCATGGG TCACAAACACCTTGAAAAGCCgaagaacttaaaatttttgaattttgtta atttttttttattcagtaATATTAAATTCCAACCTAGCAAATAACTTCTT TTTTAATTCCACTTTGATCTGTGGGTTCTACTCACGCCAGTGTTCAATAC TGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054246TCONS_00054246Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054246-proteinTCONS_00054246-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1092640..1098293 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.06 0.15 0.07 0.13 0 0.08 0.08 0.27 0.2 0.46 0.22 19.91 19.26 0.07 0.18 21.52 20.94 246.07 292.95 197.13 201.78 426.3 563.59 500.33 502.07 2.45 4.46 0.14 0.26