XLOC_034229 (gene) - C. hemisphaerica

Overview
NameXLOC_034229
Unique NameXLOC_034229
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1317976..1321759+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034229 ID=XLOC_034229|Name=XLOC_034229|organism=Clytia hemisphaerica|type=gene|length=3784bp|location=Sequence derived from alignment at scaffold_242:1317976..1321759+ (Clytia hemisphaerica)
tttcatttgatgataagaccatagtataagaaagccgcggctggaatgat
aacatctgaatttctgttattctatctctgtcgtatttgatgactatttg
ttgatcaagNACTTATCCATAATTTCATCTGATACTTTTGCAGGGATCCA
TTCTCAAAGCGATATTGGGCGTGTCCAAACTCGAGACGAAAGTAAAGTTG
TCATTGGAtatgatgacatcatcactAATTCCAATGATTACGTAATAATT
TCAGGTGTTCCGGGAAGTGGAAAAACAACATTAGCGGAAACACTGCTGTA
CAGCTGGAGCTGTGAGGGATTATGGCATAATACAGCCCAGGTTGACTCAC
AagaaaaaggtgtaaagaaaaaagtccactttgattttgttttcgttCTG
TATTTTCGACAATTAGTGCGTTTTCGAAAGGACAACACAATAACAGCGGA
AAAACTGTTGGATTTCTTTTATCCAAACTACGGATTCAATGATGGTGCAT
TATTGAAAGAACTGAAAAAGTATGATCGTAAAGCTTTGATAGTATTGGAA
GGTTTTGATGAGTTTGCCAACAAAAGAGACTTCGTTGATCAACCAGAAGA
AGAATGGTCAAGCCTTTCGCGTAGCATACACGATTTGATGAATCCCGAAA
ATCCTACTTTTGATGGTATATTAACACGCGTGGTATCTAGTCGACCGGGA
AGTTGCTCTTTATTAATGGATACATTTTTCCCGCGCTCATCGAGACATAA
ACATTGGAGAAAAATAATCGAGGTAACTGGTTTCAATAAACAAAACATCG
ACCTCTACATTCAAAAACATGTGCGCGATGATCAAAAGGTGAAACAGgtt
caagagaaaattgatgaTTCCCAAATGCTTGGTAAAATGATTGCAATTCC
TTTCTATGCGTGGGGAATCTGTTATCTTTTGAACAGTACAGATAATACTG
AGGGAATCTCCGTTCACACTTATACTTCGCTCTTTTGCAATCTACTCCCA
TTGTTTTTGAGATCACACAGTGCTACTCGGAAAAACCNCGCTCTTTTGCA
ATCTACTCCCATTGTTTTTGAGATCACACAGTGCTACTCGAAAAAACCAA
TTTGGTTGTTCGACCAGAAACATCTTAGAAGATCCAAAAGTTCACCAGGA
ATTGCTGACACTTGCTAAAATGGCTTTTCAACTTGAAGTTGAAGGTTTGT
TATACACTTCCATACGTTTTAATGTCTTTTAAAAACACCGATATGTGTGA
CCTTAGCCTTTTAGTATAGTGCATTCTCGAATATTTATGGAACTTTTTAT
TGATCAGAAACGTCTATGACCGAGGATAAAATAGGCTACCTTATTGGGAA
AAAATGttgggggaaagtgacgaaaattttgagaagtTGACGAAATTTCC
CCCCGACGAACTTCGCCCAAAATTTTTACCCGGTTTTTTAACCCCCCAAC
CAagatttttctccaattttttatttcaacaggAAAAAAGGTTCTCTATC
GTAGTTTTCCATTGTAAACGTTTCCAGGGATGTTTCTTAATAGAACaaat
aaaatgactttttttcaaacgaGTTCTTTTGCCCAATAAACACAACAAAC
TATGTTAAAACTGCaatggtttgataaaaaattcttatGCTCTATATTTT
GTCggaaacattcaaaaaattttggtcagggaaaagtgacgaatttgaaa
ttttggtcgggggaaagtgacgaaaatgcctctaggtgacgaaaatattt
ccccgacgaaaaaaaaccctGACTATATAAAACTCCGACATATTTTTCCC
GATAAGGCACATCACATTTCCTTTGTTTAGAGCCTAAAGCAATTTCTTAT
CGAGATAAAAATTGAGATAGCCTAAGACCTGTCTATTAGAACAGGTTACT
GATGTTTAGAATAATTCCTCCTGCATAACTAGCGAATTTGTATGTTTCTT
GCAGCTCATTGTAGAtctaaattgtttttcttttaggtAAAATCGCTTTT
ACTTCGGAAGAGATCATTAGTGGAGAATTGTCAATGAAAGAAGTGTTGGA
TGATACTGGTTTAATTATCGAAATTGATTACCCGGATTCAATAGAGGGTA
CCCGGTACCAATTTCTTCATTATTCATTCAATGAGTTTCTGACTGCTTTA
CATTTATTTGATACCGGAACAGTAGATGCCCGGATCACAAATCCGTATAT
CTTATCAATGTTATCCGGATTGGTTGGAGGTTCTCTTTACGACTCACAAT
CTTCGCCAATCGTAAGAAAGTTCACATCCATTTTTACAAAGTCTTCAACA
GAATCTAGAAAGGAATTATTGGTTGATCACTTATTAGCAAAAGAGCCTAA
AAATCCTCAACATTTTTTCATTGACGGTAAAGCATATTATCTGAGTGTAT
TTTATgagtatcaaaacaaaatagaatATAACGAACACTTACATATTCAG
ATTACCAATGGTTCATTGAacaattatgaaaaacaatGTCTGGATTATTT
AGAGAAACAAGCTACCAAAGGAATGTTTCGTTTAAAATCTGTCACCTTAT
CTTCCTTCAAATGTCCGTTGGAAAGTGACGAAGCGAAACGGTTGCACTCG
CTCTTCATGCTACACACTAAAAATGTTAACGTTTCTTTTAATAATATTAT
TCAAGTCTCGCAACTTGCCGAGGTTATCAAGGATCATGTTATCCATTTAA
AACCCGATTTCAAAATCCAACGGTTATTTTTCCTAACATTGCCAAACACA
GATATGTCAAAGGCTGCTCCTATTCTACCCTTTGTTCATGGGTTGGAGAC
CAATGGGTATTTATCACAGCTTCGTCAATTGTGTACTGCAGCATCAGTCA
AGCTGAGAGAAGGTCAACCAGCTCCGTACAGGCTCACTTATCATTCTCCA
TTCAGCTTAACGGCTGAAGAGCTAATCGAATGTGGCTTGAATATATTCCA
GGAAATTATACTGGCTTATAATCCGTACATACAACATATGGGAGCTTATA
AACATCAACATGCAAGGGATTGTATTGCATTTGAATCGTGGAAAAAAATG
AGGTTAATGTCAGTCAAGATCTGGTGTGGCTTGCAAACTAGTACATCAGC
CATCAGCGAACAACTTGAGCAAAAGATAAAACGCATTGGTGCATCTTGTA
TGCGAGGATATCTTTATGAAGGTGAACCAACAATCTTCGACCATTCAGAT
GAAATCGAAAATATATCAATGAGGAAACCCCGTGAGACATATATTCGAAT
GCCACCAGGAGTTCGATCATTAAAGGATTATCTTCGCCTTGGTGTAGAGA
GCCAATCCCAAGATCCCTAATAACTTACAACTGGCCTCCGTGCGtcgtag
aattttttttcaggcaacTNATCCCTAATAACTTACAACTGGCCTCCGTG
CGTCGTAGAATCTTTTTTCAGGCAACTTGAAAATATATCTTCAACCATTA
AAATGAATAATCGACGAATGACAGCTACAGATAAGATTAAATCCAATCCA
AACGATCGATTAGATTAGAAGCAAATATTTAAGTTCACGATTAAACTATA
CCGtcatttctctaatttaatgCGGCCgattaaataaatatttttgaggt
GTCGCACTCATAATGGGAGaaaataaattactttgaaCCGTTGACTTTCC
TATCGCACTAAAGATTAGAGGAGAAATCTAGTTTATCCGCACTAACTTGA
AGGAaaagtaccgtgaagtcgggtaacttgcatcagtggagacaaacatg
catagccctcaaatgaatgaccaataaaagcagc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054264TCONS_00054264Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054264-proteinTCONS_00054264-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1317976..1321759 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.07	0.13	0.03	0.07	0.01	0.35	0.48	0.44	0.93	0.58	0.3	1.2	0.68	1.45	1.48	0.78	0.86	2.03	2.46	0.92	0.94	1.72	2.01	6.06	8.13	18.21	20.49	2.63	1.75