XLOC_034305 (gene) - C. hemisphaerica

Overview
NameXLOC_034305
Unique NameXLOC_034305
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:1759360..1769084-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034305 ID=XLOC_034305|Name=XLOC_034305|organism=Clytia hemisphaerica|type=gene|length=9725bp|location=Sequence derived from alignment at scaffold_242:1759360..1769084- (Clytia hemisphaerica)
AATAACTTTAGTATTGCTGGTTACAAGTGGTTTTGATCAAAATGGCGGTA
AGAATATTTTAATTTCTTCTATTTGAGCAAGCTTATTAACCTAAAATTGA
ATTTTTGGCACGTCCTTGGTTCACAAATTGGTCACAAAGTCTCGAAAAGA
TGTTACGCGATGAAATATATTTGTTTTAATGAAAAAGATTGACAAAAAAA
ATGTAAAAGAAAAAAAGATTTATCCGAAGTAATCAATCTCCCAAAAAACA
AAATTTGGAACCATTTATATCTTTAACCGAAAGTTTTGGGCAATTGAAAA
ATAAAATCATATATTGAGCTCTTCCAAAAAACATTTGAATTTGGGGGTGG
AGGATATAACATTTTTTGGAAATTTACCCCCCGGACATTGTGACTTTTGA
CCAACCGGACAACAGATATAACCCCCCGGACAAGCATCAGTTGGCCTCCT
GGATATTCATAATTTTCTCCTAAACAGAGAAGTTTTGCCCCCAAACAGGG
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCCCCCCCCCCCCGGACAATATATTCAATATAT
CCTCAACCTCATGCACGAAAATTTTCTGGAAGAGCCCATTGTCAAAAATT
CACTGAAAGTGTGATTAAAAGATTTCAGTTGTATATTTCCAACGACGCTT
TATCAAGAGCAGTTGAAAATACCCTATACAAAGGCCCTATTTTCATTTAA
CACATGGACGATGCTATCGTCCGTATAATATAACATATAGTATGATATAA
CATAGTTTGTATATTATAAAACGTAATATGTTGCGCGGCGGATAGAGTCT
ATGTTACCCCCGAAAAAAATTCCAGTCTTCATGTTTGTTCCTCTTAGATG
AAACTCGCTCGCGTGACATTCTGCATGAAAGAGCCTCGTTTGTTTTTGTT
TTTTTCAAAATGAAATTAACTTGGTTCCTTGGGAGCAATAGCAGTGCTTT
TACAAGAATTTTCTCGAGATTAGTTAAGTGTTAAAACTTTTCTCAAATAC
ATTATATAATAAGTTTGAATTCAGGAATTTAAATTGAGAAATCTGGCATG
TTTTTTTTACGTGGTTGCACTTGCGAGACGAAGTCTTTAACCTTCTATGG
CTATTTGAAATACTGAAACAGACTTTTTTGAAGATTATCGGAATCACCCC
TTTCACAGTGAGAAATTTCAAATCATCACGGGAGAACTTAAAGAAATGAA
ATACCAAGTGGAAATCTTGTTATTAATGACTGTGGGAGATTGATAAAAAT
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCC
CCCGGAAAATTACCCCCAGACAATTGCCCCCGGGACAATTACCCCCAAGA
TAGTTTCATTATTTTTGCATCCCCCTCTCAACTGCCTCATTTCCCTATAA
TCATTTGGATCCAAAAACATGTCAAAATTTATGGTGATCAAATAACTCAA
TTTTAGCCTTAATGTTCTTATAAAAAAACTAATGTTTGGAATTTCCTGAA
TTTTTTTGAAGATATTTTGTGAAGTTTTGTGAATGAAAATTAATTTTTGG
TCACACATGTTTGTTTTACAGTGGTTGTATGATGCAGACTATTTTCTCCT
TTGAATGAATGGTTCGAATAAAAAGTGGAAAAATTATACTATTAGCAGCA
TTCTTAAATGTTCTTAAATGCAGTTTTAAAGAATAACAAGAGAAAGTAAA
AAATAAGACTAACTGTAACGATCAAGAATTGTCTGGAAGGGAATTTATTT
TTTAGGGGGGGGGGGGAATTGTCCCGGGGACAATTGTCCGGGGGACAATC
TTTCAAATCAGAGAGTTTATCATCAGAACGATTATGCTGAAAATACCGTC
TAGTACGATAATGGCGAATTTTTCAAGAAAAATTTAACAAAGCTAAGAAT
ATCCCCAGTGTCACAAAAAATTTGCTGGCTCTTATAAAAAGAGGTATCAT
TGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTG
ATTGATTGATTGATTGATTGTGCATATTAAGTAACAATAATTGAAAACCA
TAATATTTTCTATTCAGTCAGAAAGAAAAGACACTATTTTATTTGCTACT
GGCAGTTTCATGCCACTTTTGTGACAATCTTCATATTTTCTATTTGATCC
TATCTGACAATGGGCTCTTCCAGAAAAAAATTTTACATGGGGGGTGGAGG
ATATAACAATTGTTATTAATTGACCCCCGCGGACAGGGTGACTTTTGGCC
CCCCGGACAATAGGTTTTGCCCCCAAGACAAGCATCTGCTGACCCCCCGG
ACACACCAATTTACCAATTTACCCCCCGGACAGAGCAAATTTACACCCCG
GACAAGGCAAAGTTTGATTATTTTTTGCTACACCCCGGACAATATATCCT
CCACCCCCCATGCACAATTTTTTCTGGAAGAGCCCAATGTGTCTTCTTCG
TTCATTTTCGTTTGCTTTCTGGGATCATTTCTGATCGGTAAATCGATAAA
TGGGTGTGATAGAGAATAATCAAGTTAAGAAGAAATTAGTAAGTCGATCG
GTCGATCGATATCAAAACATAATTTTTTTATTTTCACTATAATCTCAAAA
TACTCTGTAGGTGTCATCTCAACGAAAGAAATTATCATCAAAACGAATAT
AAAAATGAAAATGAAAATATGATTATGAGGTTTTCTTTTCTTTGTGCGTG
TGATATTAAAGATTTTTCTTCACGAATGAAATAGAGGTTTGTCTTTCATC
CTCTCTCGAAGTATTGAACATCTTCCATCCTTCACTTTCCTTTGTCTTCA
GTTTTTTCGTGACTTTCATTTACACAGCATGTTTTCGCGGTTGGATCGAA
GGAACTTTGTATTTCGACTGGCTAATAAGGAGAATGGAATAATTTTTGTT
AGAGGGTGAACGACCGACCGACCGACCGACCGTAGTAAAGAGAATCGAAA
AGAGCAAAGCAATCATGAAAATGGGAAAGTTCAAAGAAAATTCGCTTCTT
TTTCAATGTTTTTCATCATTAAATCCAAGAATATAATCTGAAGCGACGTG
GGTGTTTTTTTATTGTGTCTAGTAGAGTAATCATTTGATAGGGAAAGGAA
AATCCAAACTTTATATTGCTTTATATCTATTTGAAACAACCCTTATCTTA
GCTTTGATCTTAATGTTATTTCAATTTGCGTAGGTGTTTCATAGCAGTTT
AGAGGCTCTGTTTATTAGTTCTACTGGCTGTCTGAACGAATCAGTTGCCG
GCTGAACCTTCTGAACAAAAGGACCAAGAAGTTGTGTGGCTTTTGTTAGC
TTTTAAGGTTGTCTGGCAAGGAAAGAATCTGCCATAACTTGATTTCATAA
CATCTCAGTATAATGCTTTGGATAGGGAAGGCCCGAGAGGTGCAGATATT
GGATATGTGTGGACGGGACCTCCCAAAACCAACCCTTAGAGAGACTAAAT
TTTAGTGAAAAAGTGACTCTTATAAAGAAATTTTTGTAAGATTTTCTTCC
TCGATTTTCGAAACATTAGTATCAATCGCGGGGATGAAGATTCTACCTGT
TTTTTTGGCTAGTGGATTTCACATTCTGCTTTCAACTCGTTAAATTATGT
CAAATGTTTTTGTTTCATTATCACACAGACACACCATCATTTCGATTACT
CCCACGAGAGTTGAGATTTATGACTAGGCTGGAGGTATGATTGTCGTCCA
AAATTAGCTGTTATTGTTCCATAGAACGGAATATATTTTGTTAATGTTCA
GGTCTATTGATTTTTTGAAAATTTAGATATTCACCCGATTAATTATAAGC
CTTTCAAAATTCACACGCGGGTTTAGACTTCGGATTTCAATAATAAAATA
CATATTCATTCGGAAAATTTTTTTCTTATTCCTGGTTTTGAACTTTTACA
GTAATCCTTCAGAAGTTCAGTTTTCTGTTTCAAAGAAATTCATGTCTAAA
AAACTAATTTTAATCTGTGAAAAGAAGGATGTAACTTGACAGTTTAAGGT
TAAATATCTTCAATTTTGCAACCTTAAAGTCGTGTTTTTATCAATAGAAA
GGTTAAGCAAAGGTGAAACCTTTCTCTACTATGGTTAAACTTCTTTATGG
TTTTGTGAGAAGCTGAAACTCAGACTTCGTTCGTTTAATAAAGAAAGTTT
CTTGGTTTAATGAAGGGTCGACAAAGAAGGTTTGATATTTTTGGACCTAC
CCCGGTGGGGTGGAGGTCCTATAAATTAACCCGTGTTCGTTAGTTAGTTA
GTTAGTTAGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTAGTTACCAACT
TTTCTCGAGATTGGCTCATTCAATTTTTCTGATTTTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAATTTTCGAAAAAAAAATTTTTCCGGCCGGTAGAACCGGA
AATGTCCCGAAAAAAGCGGTTTTTTGAGATTTTCTCAAGATTTTATCATT
AGTTTTTTGCGATATTTTGCACATAGATGCACATTAGTACTGCCGAAAAG
GTGTCGAAAACCGTTTGCCGAAAAAAAATTTTTTCCGGTCTGTAGAACCG
GAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTTTTTGAGATTTTCTCGAGATTTTCTCATTAGTTTTTT
GCGATTTTTTGCACATAGATGCACATTAGTACTGCCGAAAAGGTGTCGAA
AACCGTTTGTCGAAAATTTTTTTTTCCGGTCTGTAGAACCGGAAATGTGC
CGGAAATCGTCGCTTTTTTAACATTTCCGTCACATTTTTTCAACTTATTT
AATTGTTTCTTTACAGAAAAATGTTCTTTATGATGATGCCCAAAACTTAG
CATCGTTTGATTTCCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTCTTTCATTTTTCTGTCTTTAGAAAAAAAGAAAGGAAAATCTTCAAA
ATATTTTCCATCAGTGAATTTTAAGCTATTTCAGTGCAGTACGAATGCTT
TACTCGCCCAAAAAGATCTCCAACACCCAATATTTTCTTGAAAATTAGAT
TGGAAATCTTTAATTGGAGATTTTTTTCGAAAATTGATTTCTTCGAATGA
TCGGTTATGACGAAAGTATTTTAGCTAATAAAGGAGGAATACAAGTGTTT
TTAGGAAAATCTGAATCAAATTGAATTGATAAAATTGTTGATGAAAATCT
TGGTAAATGATCAAAAGATTTAAATAGACCTTATCAGAGTTTTTGATTTT
TCGAAAACAGCGATGCATTGTGGGATTGTTTGGGGGTATTTATTACAATA
GAATTCCCTCGAGGAATTCCTAAGAGATTTCTATTGTAATACCCCCGAAA
CAAGCCCACAGTGCATCGCTTTTTTAGAAAAATAAAAAACACGGATACGA
TCTATTTAGCGCCAAACAACTTTTTTTCGGACACACTGTATATGCATATA
GTGTTCCATTCCCTGTTCATCATAGACCTGACGAATTTTCAACACATTTC
CAAGGGGAATGTCTACTGCAATTTATATTCCACACATCTGCATTTCTTAA
CTCCTTATGAAAAAAATCTTCCCCTTTTTCAAAGTTCGTGGTCAGACGGT
TGTGAAATGAAAACAAAAAAAGAAGAAGACGAAGAAAAGAGTGATAGAAG
GTGGATTTTCAGTAAAAAAGGGGATAATTTGATGATTAAATTTAATATTG
TCGCCATATTTGTATGTGTATACAGGTGTATTTTCTTGCTTTAAGAATGA
TAGTCGTTGTCGAAATAGTAAAAGTTTTCTTTTGCTCTGTTCAAAAAAGA
AACTGGATTCAATTTAGTTCAGTTAGTTTCTCTTTTTGGAGTTGGAAACA
GAATGAAGAAGCTGATAAGAATACTACATCTTTTTCGCCGGCTGAATATA
CTGTTGTTAATGACAGGGCTACGTTTCATTTCTGGGAAAGGGCTATTTTA
TGGCATATTAGGCGGTCAAAAGGGGTTGGATTTTCTCCTGTGTGAAAACC
ATGATATTTTGGCCCATCCGTTTCCAGAAGATGATGTTGGCCCTGAATGA
GTTTTGATCGTTGGTACAGATACAGATAAAAACTTTCTTAAAGCTCTATT
TAACATGGCTGAATTAATCCTGACTGAATGTTTATTTGTTTTAATGTCTG
ATTAAATGAGTTTCATCTCCCAAAACATGAGCCCTTTAGAGTTGGAAGGA
AAACTTGTTTGGCTGTTCTGCATTTAGTTTTGTAAAAGTTTGACAAAGTC
TGCCGGCCATGTAGTTTAGGTTGAGGTTGTTTGAGGTTGGTTGAGCAAAT
GTTGGCAGTTTTTATGTACTTGTACTTTTATGCAAGCGTTTGCTTTCATT
TTTGATCCAACAAAGCTGCTACTTTCCGTTGTTCGATTTGTATGTTGAAA
GTTTTTGTAAAGTCAACATAACATCGACTTGCAAACAAAACAGTGTTCTA
AATCCAGCAACTTGCATCTGATATTAATTTATAGGGATTAGCTCAATCGG
ATTGTTTGGTATGTGATGTTTAAGTAATGGAGAAATTTTCAATGGTCGAG
ATTCGGCTGTTCTTATGTTTTTGATAATCTCATTTCGTTCTTATTTTTAG
TTCTTAAATCTGTTAGGCTCTGAAAGATCAGGAAGAAGATAAAGATTCAG
CCGGCCGGGTACACGGTTTTTTATAAGAACAAACTATATGAGAACGTAAG
GTTTCGATGGACCAAAATCCTCCGAAGGCTTAAAAAATTTTGGATGTTCT
TTAAAAGAACGTATAATGAGTTTTGTTACAAGGGGTAAAAATCATATTTT
CCATTTCATTTTTCAGGTTGCAAATAATCAGTCACCATGTTGTCCTTCAT
TCCTCATCAAAACAACTTCCTCGCCTCGATGTCCTTCTTACAACATGCTT
TAAGCTTGCCTCGGCTACCATTCAACATGTTCAACGACCCTGGGTTGCTA
CATTTCAGCATCATTGCTACCATAGCAACAATCGCCATTATGGCAAACAT
TTACCTCGTCACTTACATCATGCGAACTAAAACGACGCGCATCTGCAAAA
ACTCTTGTTATGGATATTACCTGCTACACATCTCTTTTTTGGATATCTTA
GCATCAACTTTAGCGATTCTGTTATCCATAAATACACACGCGGCGGTGAA
ACCATCTAGCTCATCAATGAGTTGGATTTCTGTGAATGGACATTATTTGA
ACCATATTTTTTGTGGTGTTGTCCACAGTACTATTGCATTGATGCTTTAC
CAGAAATTCCTCTGTTTACGTAAATCTTCACATAAACGAAAAGCATTCTT
TAATTTGAAGCTGAGCTTATCCTTGACGTGGTGCTGGGCGGTCGGAAGCG
TACTCCCAGAGATCATTGTATATAAAAATGCAATCGAGGAAGAAGATAGA
GAAAACAGTTCATGTTTGATCGTTATAATTGTTTTGTTAATTATCGTTCC
GTTGTTAATGATCGGTTATTATCGAATCAGTATTCTTCGATTACGAAGGA
GTGAAAGCGTTTTATTATTGAAACGGAGTCGTGAATACCGCAAATTTGCT
TCCGTTTGCTTACTTTTATCGATAGCCCTGGTGGCTTGTAATCTACCCAA
GTATTTATATCATCTTTTACAAATCATGAATAAGGAAGGGAAAATTGATT
TCTCATTTTCTGAAAAACTGCAGACAATCTTTGATACGATTTCCTGGCTT
TATTTACCAGTTATACCGCTTATTTACTGTCTAACTTACCGGATTTATAA
ACGCAAACCCAAGTTACCAGACCTGACCAATAGTAATAACAACAATAACA
ACATCAGCGCACTGCTTGAATCCAAATTCCTTTCCATGGCGGCCACTCCA
ACACCGACCTCATTAACGACGTCGCGGAGCCAATCGGTACCGAATTTCGA
ACCTAGGAGACGCTCCTTGTTTGATAGACGTAAGAGTAATAGTAGTGTTG
AGGATATCTTGGATATTTGTTCGCGAAGATTTTCAGCACCGAATGTGGAA
GTGAACCCCGAGCTTCTCTCATCCTGCATGTTGACTTTAGAATCTATCTA
TGAGGCGAACAGGAAAAAGAAATCACTTTTCAGACAAGCATTGAGACGGT
TCAGTGGGAATCCGACTGATAGTGTCGATGACGTCAGCATGATGTCATCA
CAAGATTCGATCCCATTCCCCCATGTTGTACATCGGTTGAATCAAGGCGG
ACAAAGTCCTTTGAAAGAGGATTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054437TCONS_00054437Clytia hemisphaericatranscript
TCONS_00054436TCONS_00054436Clytia hemisphaericatranscript
TCONS_00054435TCONS_00054435Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054435-proteinTCONS_00054435-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1759360..1769084 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.92	1.09	0.62	0.25	3.86	1.98	13.03	12.74	6.59	6.22	6.28	5.16	3.27	3.95	1.77	2.44	4.57	4.44	6.16	5.97	2.88	4.33	2.5	3.46	4.16	4.47	2.59	1.12	0.41	0.94