XLOC_034393 (gene) - C. hemisphaerica

Overview
NameXLOC_034393
Unique NameXLOC_034393
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_243:708478..718753+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034393 ID=XLOC_034393|Name=XLOC_034393|organism=Clytia hemisphaerica|type=gene|length=10276bp|location=Sequence derived from alignment at scaffold_243:708478..718753+ (Clytia hemisphaerica)
GTCAGAATTCACCGGAAATATTCGGTCGGCGGAATAGTCGGCCATCAGAA
CAGTTATCCGGCCGGATAACATTTCCGTCGACCGACCGAGAAACTATTTC
TCGACGGCCGAATTCTGACCCTGACCCCCCTGTTGCGTCTTATATGGTCA
CGTGACATTAGCTCAACAAAATAAATTgcaaatctaaaaatttaagGACC
TGTCTACATTACATAAAGCAGCCGGGAGAAGAGTGGTCACCTCTTTGCAC
TTCATCGcatgtttattttgatttgcaCATGAACACACATGTCATCAAGG
TGCTAGACCAAACTTGCACTTTTTCTTGGNGTCTACATTACATAAAGCAG
CCGGGAGAAGAGTGGTCACCTCTTTGCACTTCATCGcatgtttattttga
tttgcaCATGAACACACATGTCATCAAGGTGCTAGACCAACCttgcactt
tttcttgccttcGTCCTCTGCCTTGCAACCATCCAACTTGAAGACCCATT
TACAAAGAACAAAGTAACGAAATGGCTGAACCACAATCGAAGAAACCAAG
AGTTGGCCTAGAGTAAGTATACAGACTTACAAACTTGTGATTTTCTGCAC
GTTTTTCTCACGAAGAGACGCACGTCTtcgtttttaatttaattttaagt
gaataaagtttttcatttactaacaagtttttttaattcttccAGGCAAT
TTGTATGTGTTTGTTTGTCTTATATAGTTTTAGTACCGTCGTTTTATATG
AGATTTCCATTTCGTGCGACAAGTACCATGAGATCGgggggtgcatgtca
ctagtccgacactttctagtccgacagtaaaatagtccgaatctttaaaa
taaatttacaattaaGAAGTCTTTTCTCCGACGTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtcacttttgtccgaaaacgaaagattttagagtgtcgaatgttgaat
aagggtttttcactgagataatattaatatgTTCATTTTGGCGGCATTTT
CACATAATTAGAAACaaaggaccaatcaaatttgcgtaaagataatttat
aacaaaaagaatgcacaacctttaagggtcccttttcgCTTGTTCAGAAT
TACAAGggttttaaaacacaaactttAATCAAAgaagaagggtcgtaaaa
acagctgaATCCAATTTCTcgactcttgaaagcctaatcctaaaaagctt
cccaaaatttaagaaaagtccgGTTTAGGGGCCCAACTTCAAAGTctgaa
ctttggatttttataagcacgtggttgcttataaaagatgaACCCCTTGA
ACCTCTTCGCCGATTTATATTTCGTTTTatgaatatgtttttttttactc
gttgtcggacaaaattgttgtcggaatactgacgcataaGTCAAATCCAa
tgtcggacatttttactgtcggactagaaagtgtcggactaccgACGACC
TCccgagatcgggtaacttgcgtCAGTGTAGCAACTCCAGAAGATTTTTC
AAGTTTTAATTTTTTtttcaaaatctatcctatcttgtagagctttgaaa
aagaaagaaaatgaggggtcataggcctccagaggattagtggttgtaaa
gatattcaaattttagtgtcaaaaatttgactaaaaatgtcaaaaaaaag
gttaggaaaatagcttggaaaatttcgaaaaatgtgtcaaaactggtcaa
aaaagaaaaaaaagaaattttccagtcatgcttcttaaattttgcatatc
tctttttctagtgtagctagagacctcaaatttggagggagaattNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacaaagtttcagcc
tccaaatacattttcctccgtttccagacacatttgtttttcgatagttg
caaattttttttctcccgtcggcaaacaattttcaaaatgtagcAAAACG
TCTGGAATTTTaacaatttgccgtctagcccgtgtccacagtgttatata
ccgctggaaagctaagattacgggctttcatttagtaaaaaccggaacgc
tttagcatacatagaaaagaggttagaagggttcaaagttcacggtaaaa
tgaaacatttggtttgacgtcaacgaaagttgcatgacttctggagtcgc
tagtCAGTGGAggcacgaccctcgacatggcccgagaattctcgggctaa
aacttttattggaattcgcgtaaagcccgagtatggcccgagctggcccg
agaattcggacCACACGCGGcccacgcacgggccacactcaggccaattt
ttgaaaacatgatctaaacaggcgtgtaatttcaggactgaatttttttt
aacattttctttgagaaaaacttggtttctcttaattatattaaatatat
gaatgttgtaaattcatataaatattaaatgtcttatttggtatgaaaac
atagttataaatatacttagggtggaaatatttgctagtaaactggtcct
ggttttaaattgaagcgtgtccacgggaagctcgtaaagtttttttgagc
gatataaacaaaacagacaaatcttattttgtttgactggacatgctgaa
tcaatttaatatttaacatggcccgaaaATGGCCCGAATGTCttgggtca
tgttcgggccaaaagaattgatagggtctctcggcccgaacatggcccga
agaggcccgagaattctcgggcctcttcgggccatgttcgggccaaaaga
attgatagggtctctcggcccgaacatggcccgaagaggcccgagaattc
tcgggccatgtcgagggtcgtgtggaggctaacatacggtagatgttata
tcggatggccaatcgtcacctttttttatttcctgtctcttatcctattt
ttctcttttctgactgtctgagactttgttttttattttctaactaCCTA
AGTTTTGATCCGTCAATGATATTTCATCCAATCAAATCATCGCACCGTAT
GGGGTTCGAACCCTTGCCAAAGATAAAGACCTTCGGTTCCGGAAGCCAGA
GCACTCTATCCACTGAGCCATCGTCGCATGCCATACCAAATTCCGCAATT
TGAAAGAACTTATATCGAACGGACAAATCTCTTTATATAGATGAaactcc
caaccctaccggtacCCCTACAAGGATNattgatagggtctctcggcccg
aacatggcccgaagaggcccgagaattctcgggccatgtcgagggtcgtg
tggaggctaacatacggtagatgttatatcggatggccaatcgtcacctt
tttttatttcctgtctcttatcctatttttctcttttctgactgtctgag
actttgttttttattttctaactaCCTAAGTTTTGATCCGTCAATGATAT
TTCATCCAATCAAATCATCGCACCGTATGGGGTTCGAACCCTTGCCAAAG
ATAAAGACCTTCGGTTCCGAAAGCCAGAGCACTCTATCCACTGAGCCATT
GTTGCATGCCAAATTCCGCAATTTGAAAGAACTTATATCGAACGGACAAA
TCTCTTTATATAGATGAGACTCCCAACCCTACTGGTGCCCCTATGAGGAC
CTTCAGTCCtttattgtgactctcgagctccaaccctgaccctaactgat
gataaccgaacccccgtcttcCAGGGTGACTTTAAGCGATGCGCGGATGA
GAAAATAAATaaggtgacttttggccatccGATCTAAGAGCATCCCTAac
atacatagccctcaaatgaatgacctggctggtcattaaaatacaaagtt
aaatcaaaacaaaaatggtagactagagctgcgtagttcatttgttttga
aattttgctgctttcattggtcagtcatttgatggctatgcaagtttccc
tgcaatgatgcaagttacccgacttcacggtagctAGTGTggcaagaatc
ttagtgcggaaatgggaatcttatacaaagcGACAGTAAAGGTGAAGGTT
ATTTAGTATAGGAGACCAGACAACCAGCAAACAGTCAGGGATACTTGCGA
AAACATTACAATCTTAGCAATCAATAAGCATGAAAATTAACCTTAGGGGA
GCCATCTAAACTCAAACTTGCCACTGAAAACGTTGATTGGACTATTTGGA
GGTGGCTATTTATTCCTGCAGTCTAGACTTAAACTCccatatcaggatta
gaaactagactaaaacaaaatttttttttttaattgtcttaatcgaaatg
gggggggggatacggaattttctatgtttagttttttcgcacaaacccct
gtaactaaaGGCAAGCATATCAAAACGTTTTAAACAGGttccgtgagtgg
tcctaaatccgacagccctgcctaaatccgaccccccaaataactgctat
gaaaaaaaattctatgtttacaaaaattccctctccaagttgaacaataa
actattgcaagaactcttaaaacaaaacatctaacaagatgactataatg
tcaagatgtcaattaatgtgatcaaaagtgtgagttgtaaaaataattac
ctctattattctgaatctgttgcatcgtgtttaaaacgttaacaattttg
taataaaaaattatgttttgtataagaagcaattattgttatttggttca
attggttaagtgtatcaaatctctcagtttagtttcTACACTTTGATATc
ctcattgcgtcacagcgaaaggtttgtttttattttagtttgtatctttg
aaagaccccattggatttaggcagggctgctgtcggatttaggaccactc
acggttaTACTCAGAAGCTTTTATTTATAACATAGTgtgaaccccccccc
ttttttaaggggggaTCCAACTTTTCCAGAAAGTGCATTATAGGGGGgat
aaaagattttccaaataaaatggGAGGTTTGAGATTTTAGGAGGGGTCAA
GTAAAAATAGGGGGATAACaacttttggtcaaaatatctatcatttttat
attgatttagatatttggtgTGGGACAACTAAAAAACAAGTGTAGATAGC
TAAATTTTCGCCTGCAGCGCCATGTTTAactcttttttcttataatcttt
tgatacaaatttcaatgtttttggttttgaaagaCTGGTTGACTGCTGCT
GAAAATAGTGCGgattcaaaatgtttttcaaatagggggatgaaatcaaa
atgggggggggtcagacccctctatgtataaacatttaaaaaagacCAGA
CAGTTGTAATGGCAGAATTAGACAAGATATGTTGGCATTACACAAAGTTA
CGATATGTCTTGGCTCCCTTTTGAATTTTGCAGATGACCGTCTTTTTGGA
CTTATGGGAATTTCCgtgaaaaagtttagaaattacaTCCATCATTTTTA
AATATGAATTTTATTAActtattttgaattgttttttttcagattgaAAT
AGAAGAGTGCTCCAATCATATTTTAAAATGATTCGAAGCATATTATCTCT
AAATTTTTACAGAAGATTTTCGTCTTTTCAGAGTCTGTTGAAGAGAAGGT
AAAATAACCCATTTTAGACTTTTTAACACAGCTTTTCTGTACCATCATGG
tgattaatttcaatttctttctaGAGAGGGGCTTCTGGTTGGTATGGGCA
ATCCTTTACTTGACATATCTGCAAACTGTGACGAAAGTTTCTTGACAAAG
TAAGATTTTAATAACTTAATTcatcatttttataatttctaTTTTCTTAC
AAAACATTTGCATTATAATATATAACTATTGCAATTGCTGTACTTAGTTG
GGCACAAGCAAAATTATTTATTGATCATTTTATTCATTCATAGATACGAC
CTAAAAGCAAATGATGCTATATTAGCCTCAGAACCTCACCTACCAATGTA
AGAGATAACCCTTTGAATTTCTGTTTAATACACTTATTTATCAAAGCTTG
TGACTGAGATAACTTATAATTGCCAAACTTCATGAGAgccttgaaaattt
tttttggatagCATCTAAAAGCATAATGTATTGCTTGCATCTTGATAATG
AAGATCCTGGAGCTGTAAACAAGACCTGCTTGGGTCTTGGGCTTGTTGAA
TGGTGAATGATTTCATTTTAAGATAAAGTTAAATTCACAACTAATGGTTA
TTTAAAGGTACAAAGAAATGGTTGACAAATTTGATGTTGAATACATTGCT
GGTGGGGCAACATTGAATACAATGAGAGTGTGTCAATGGCTGGTGCAAAA
GCCCAATGTCATTTCTTATTTTGGTTGTATTGGTATGTAttaattaaatt
attttaaaagtaTTTGTCGACATTTTTAATCTTTCTAGTAAAATGTTATT
AAAACAAGATCAAAACTATTCTTCTTTTTATCCACAGGTGACGATGACTA
TGGTAAAAAGTTAGTTGAAAAAGCCACAGAAGCAGGTGTAAACATGAAGC
CACAAGTTAATACAGAAAATGATACTGGAACCTGTGGTGTACTCATCACA
AACAAAGGTGCCAATCGATCCTTAGTTGCAAATCTTGCAGCTGCCAACCA
CTTCAAACGAACTCATTTTGACCAAGAAGTTGTCAAGAAAATCATTGATG
GAGCAGATTATTTTTATATTGGGGTAAGAATGATTACCAAATTATCTAAA
ttactttttgaaattgaagaaacGTGGTAATTATTAaattacaatgtata
gcaatgtcccctcccggttattaccataatggctttatggcaactcctga
acttggcacaggatgtacggttacacattttgtggattgcattgtggagt
cacaagagtgctcaaactgcgAGCAGTTAAAGCAGTTAAATTATTAAATT
AAATAGATCATATTTTTCTAGCCTTTGGGCaaggaaaatatgaaaaaacc
tgaactcgaaaaatatatccaatAATATTGTACGAGTGATATTgcgataa
ctggtttatcgtcaCTCAACTTGAATATATGACCAAACTTTTGATCCTTA
ATTTGCGCAAAACTATTTGAACTTGACATCATGATAAAAGCTCTTCATTT
CATACCATAGGGTTTCTTCTTAACTGTCTCGCCTGAATCAATTTTGGAAA
TGGCAAAACATGCTAGTGACAATAATAAAGTAAGACTTGTATTACTTTCT
tgattttttccctttttcgtATATTCTCTGTTACTTTGAATTAAGATCCT
TAGTGTCATTTTTCTTTGACTGATTGTATATTTCTTTAACAACAAAGAAT
GTCCTGGCTGGAAAATTCTTGCATCCTCTGATTTTGTGATTTCAAATTTC
TGTGTGTTTTGTGTGATCTTGCAAATCGTGTGAGTTTCCTGACTGCCCTG
ATTAAATCCACACAAAACTTATATATCTAGATTTCTGGCTCAAAATACCC
tgtaaattttctatttttgacaAGAATCTGTGTTTTTAGGGCCATTCTTA
ACTTATGATTTGCTGATTCGCAAAATTAGATCCAggcaaatatttttgaa
aagctattcgtgaaaataaattaaaaaactttgattttttcaggaaattg
aATCTCATAAAAATTAATCAGATTAAAGTAATATGAAATTAGTTTTAATA
ATCTTCagatatttcattgatttttccattgcttttcatttttcagtatT
GTATGACAAATTTGTCCGCTCCATTCTTATGCCAATTTTTCGCAGAACCC
ATGATGAAATTCTTTCCTTACGTTGACGTTTNCATTTTTCAGTATTGTAT
GACAAATTTGTCCGCTCCATTCTTATGCCAATTTTTCGCAGAACCCATGA
TGAAATTCTTTCCTTATGTTGACGTTTTATTCGGAAATGAAACAGTAAGT
TCTTAACTCCTAAGTACTTTTTAAGAGCAGCCTAGAGACTTAAATGGTCG
GTTTtaatgctgaaattttgcacagctATTCTTTGATGAATCCTTGGggt
actttttcattcattaaATAGTTGTTTGCGAAATTACGGCTAAAACCTTG
GTGCTCCCTGCTTGATACTTATAAGATAATTGTATTTGGCTGATATTTGG
CATCTCAAGTTAATAGCTGGATGGTTTCCTTTTTATTTGTggaatttctt
ttctttaaaattttgattttgttaaCGAACGACCATTATTGCCCTCTAGG
AATTTCCACTAACTTGCTATCATTCTTGCTGTAATGTTCATTTTCTTGAG
AGCAAGGTTTTACATTGTAAATAACAAACAACTAACTACAAGCTCGTTGA
TacatatattttgatttttttttatattttaggaAGCTGTTGCATTTGcg
aaacaacaaaattttggcgtaagtaaattctttcattttgtcAGTACTAT
ATTGCCTTGGAGAGCTGAGGTAGATTTGAAGTAAAGAAAATGAGAGATCA
tttaaattgaatgaaaaagtttaaactTACCAACCTCTTACTATATCCAC
TACCTCTTTTAGACTGAAGACATCAAAGAAATCGCATTGAAAGCAGCAAC
ACTCGATAAAATCAACAAAGGACGTGAACGAATCGTTATTTTCACTCAAG
GAAAAGACCCTACTATTGTGGCTACAGGTATAACCTCCTCATCCAACCAC
TGGACTTCAAAGTGGCTTTTCTAGTTACACCTGGCACCGACCAATTCGGa
ttataaacatgaaattttcaaaagccaACCAATAGGAACACCTCCTTTAA
GCCTGCCTGACTAAAGGTTATTTTATGTGTTTGTTCCCTAACTAATTTTT
ACTTCAAACAATATGCATTATTTTGCGTTTGATTGGGTAGAACTAGAAGT
CAAAAACTTTATTCTTACCCCTTTCATACTAAACTTTCTAGAGGAAAATG
AAGGTACTGCGATGTGTACGGAAATTACACAGATTGTTTGTTGTTTAGGT
GGTAAAGTAACCGAGTACCCAATCATCCCCATTGAAGCGAAAGACATCAT
CGATACGAACGGTGCCGGTGATTCATTTGTTGGAGGTAAAAATTTCGGTG
ATTTGATCTCTTTGCATTGCGTTTTGGGAAAATTCTTTACCCTAAAATTA
CTCATTATTTTGTAACAGCTGTTGATAGGTCTCATTTTCAATTTGCTCCT
GTAACCACCTAGTAAACAAATGTACCCTTTCAAAAGATAAGGACTAATCA
TCTCTCATCGATCCCTTCACCAGATGAACGTCGATTATTATTATTTGTAG
GATTTTTAAGTCAATTTATGCAAGGTAAAGACATTCCAAGATGTGTGCAA
GTTGGCAACTATGCTGCCAATTACATCATCCAACAATCTGGAGTAACACT
AAGTGGAACTCCCAACGTCcctgctgaataaacaaaacatTTCACATACA
CGTACGTTATCATGCTGAAGAAATAATTACTATTTGaactttggaaaata
atttatttagatattttgatagatttttttatcctgtgatttttatattt
tgatcaATCAATCCCATTGAGCAAATCTTTCAAATAGAGTACAtttaagt
aaaaaagaaaaaatagttcGATTTGATTTCTTTATCTACGTTAaggggaa
cttattttggcgacaatttatttgtttgaaattaaaaaattgtcatagtt
tttcgtgattttctaaaataacCCACCTAGTCATGTACCACACGCTTGTC
TGTTATCCCTTTGAAGGTTTggctttttttcaatcaatataGTAGGCAGA
TTTATAAAGTGTACTCGTTGAAAACGACAAAAGTATAGGACATAGTTCGC
CGTCTCGAAATTAGACCATTCattcatagaggtataaagaaaatcaggag
ttgaatgtgtcggtaattggtcgtta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054568TCONS_00054568Clytia hemisphaericatranscript
TCONS_00054569TCONS_00054569Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054568-proteinTCONS_00054568-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:708478..718753 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ADKadenosine kinase isoform b Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
456.09	501.81	301.64	265.91	286.3	233.44	276.56	291.79	353.17	279.06	327.8	472.4	524.99	520.19	567.73	664.59	379.43	384.16	361.39	325.59	412.1	401.58	418.22	412.06	185.75	170.1	1000.37	1004.34	489.58	399.81