TCONS_00054569 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00054569
Unique Name	TCONS_00054569
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2087

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_243:708478..718753+

transcript sequence

>TCONS_00054569 ID=TCONS_00054569|Name=TCONS_00054569|organism=Clytia hemisphaerica|type=transcript|length=2087bp
GTCAGAATTCACCGGAAATATTCGGTCGGCGGAATAGTCGGCCATCAGAA
CAGTTATCCGGCCGGATAACATTTCCGTCGACCGACCGAGAAACTATTTC
TCGACGGCCGAATTCTGACCCTGACCCCCCTGTTGCGTCTTATATGGTCA
CGTGACATTAGCTCAACAAAATAAATTgcaaatctaaaaatttaagGACC
TGTCTACATTACATAAAGCAGCCGGGAGAAGAGTGGTCACCTCTTTGCAC
TTCATCGcatgtttattttgatttgcaCATGAACACACATGTCATCAAGG
TGCTAGACCAAACTTGCACTTTTTCTTGGNGTCTACATTACATAAAGCAG
CCGGGAGAAGAGTGGTCACCTCTTTGCACTTCATCGcatgtttattttga
tttgcaCATGAACACACATGTCATCAAGGTGCTAGACCAACCttgcactt
tttcttgccttcGTCCTCTGCCTTGCAACCATCCAACTTGAAGACCCATT
TACAAAGAACAAAGTAACGAAATGGCTGAACCACAATCGAAGAAACCAAG
AGTTGGCCTAGAAGAGGGGCTTCTGGTTGGTATGGGCAATCCTTTACTTG
ACATATCTGCAAACTGTGACGAAAGTTTCTTGACAAAATACGACCTAAAA
GCAAATGATGCTATATTAGCCTCAGAACCTCACCTACCAATGTACAAAGA
AATGGTTGACAAATTTGATGTTGAATACATTGCTGGTGGGGCAACATTGA
ATACAATGAGAGTGTGTCAATGGCTGGTGCAAAAGCCCAATGTCATTTCT
TATTTTGGTTGTATTGGTGACGATGACTATGGTAAAAAGTTAGTTGAAAA
AGCCACAGAAGCAGGTGTAAACATGAAGCCACAAGTTAATACAGAAAATG
ATACTGGAACCTGTGGTGTACTCATCACAAACAAAGGTGCCAATCGATCC
TTAGTTGCAAATCTTGCAGCTGCCAACCACTTCAAACGAACTCATTTTGA
CCAAGAAGTTGTCAAGAAAATCATTGATGGAGCAGATTATTTTTATATTG
GGGGTTTCTTCTTAACTGTCTCGCCTGAATCAATTTTGGAAATGGCAAAA
CATGCTAGTGACAATAATAAATATTGTATGACAAATTTGTCCGCTCCATT
CTTATGCCAATTTTTCGCAGAACCCATGATGAAATTCTTTCCTTATGTTG
ACGTTTTATTCGGAAATGAAACAgaAGCTGTTGCATTTGcgaaacaacaa
aattttggcACTGAAGACATCAAAGAAATCGCATTGAAAGCAGCAACACT
CGATAAAATCAACAAAGGACGTGAACGAATCGTTATTTTCACTCAAGGAA
AAGACCCTACTATTGTGGCTACAGGTGGTAAAGTAACCGAGTACCCAATC
ATCCCCATTGAAGCGAAAGACATCATCGATACGAACGGTGCCGGTGATTC
ATTTGTTGGAGGATTTTTAAGTCAATTTATGCAAGGTAAAGACATTCCAA
GATGTGTGCAAGTTGGCAACTATGCTGCCAATTACATCATCCAACAATCT
GGAGTAACACTAAGTGGAACTCCCAACGTCcctgctgaataaacaaaaca
tTTCACATACACGTACGTTATCATGCTGAAGAAATAATTACTATTTGaac
tttggaaaataatttatttagatattttgatagatttttttatcctgtga
tttttatattttgatcaATCAATCCCATTGAGCAAATCTTTCAAATAGAG
TACAtttaagtaaaaaagaaaaaatagttcGATTTGATTTCTTTATCTAC
GTTAaggggaacttattttggcgacaatttatttgtttgaaattaaaaaa
ttgtcatagtttttcgtgattttctaaaataacCCACCTAGTCATGTACC
ACACGCTTGTCTGTTATCCCTTTGAAGGTTTggctttttttcaatcaata
taGTAGGCAGATTTATAAAGTGTACTCGTTGAAAACGACAAAAGTATAGG
ACATAGTTCGCCGTCTCGAAATTAGACCATTCattcatagaggtataaag
aaaatcaggagttgaatgtgtcggtaattggtcgtta

Run BLAST on NCBI

transcript from alignment at scaffold_243:708478..718753+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00054569 ID=TCONS_00054569|Name=TCONS_00054569|organism=Clytia hemisphaerica|type=transcript|length=10276bp|location=Sequence derived from alignment at scaffold_243:708478..718753+ (Clytia hemisphaerica)
GTCAGAATTCACCGGAAATATTCGGTCGGCGGAATAGTCGGCCATCAGAA
CAGTTATCCGGCCGGATAACATTTCCGTCGACCGACCGAGAAACTATTTC
TCGACGGCCGAATTCTGACCCTGACCCCCCTGTTGCGTCTTATATGGTCA
CGTGACATTAGCTCAACAAAATAAATTgcaaatctaaaaatttaagGACC
TGTCTACATTACATAAAGCAGCCGGGAGAAGAGTGGTCACCTCTTTGCAC
TTCATCGcatgtttattttgatttgcaCATGAACACACATGTCATCAAGG
TGCTAGACCAAACTTGCACTTTTTCTTGGNGTCTACATTACATAAAGCAG
CCGGGAGAAGAGTGGTCACCTCTTTGCACTTCATCGcatgtttattttga
tttgcaCATGAACACACATGTCATCAAGGTGCTAGACCAACCttgcactt
tttcttgccttcGTCCTCTGCCTTGCAACCATCCAACTTGAAGACCCATT
TACAAAGAACAAAGTAACGAAATGGCTGAACCACAATCGAAGAAACCAAG
AGTTGGCCTAGAGTAAGTATACAGACTTACAAACTTGTGATTTTCTGCAC
GTTTTTCTCACGAAGAGACGCACGTCTtcgtttttaatttaattttaagt
gaataaagtttttcatttactaacaagtttttttaattcttccAGGCAAT
TTGTATGTGTTTGTTTGTCTTATATAGTTTTAGTACCGTCGTTTTATATG
AGATTTCCATTTCGTGCGACAAGTACCATGAGATCGgggggtgcatgtca
ctagtccgacactttctagtccgacagtaaaatagtccgaatctttaaaa
taaatttacaattaaGAAGTCTTTTCTCCGACGTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtcacttttgtccgaaaacgaaagattttagagtgtcgaatgttgaat
aagggtttttcactgagataatattaatatgTTCATTTTGGCGGCATTTT
CACATAATTAGAAACaaaggaccaatcaaatttgcgtaaagataatttat
aacaaaaagaatgcacaacctttaagggtcccttttcgCTTGTTCAGAAT
TACAAGggttttaaaacacaaactttAATCAAAgaagaagggtcgtaaaa
acagctgaATCCAATTTCTcgactcttgaaagcctaatcctaaaaagctt
cccaaaatttaagaaaagtccgGTTTAGGGGCCCAACTTCAAAGTctgaa
ctttggatttttataagcacgtggttgcttataaaagatgaACCCCTTGA
ACCTCTTCGCCGATTTATATTTCGTTTTatgaatatgtttttttttactc
gttgtcggacaaaattgttgtcggaatactgacgcataaGTCAAATCCAa
tgtcggacatttttactgtcggactagaaagtgtcggactaccgACGACC
TCccgagatcgggtaacttgcgtCAGTGTAGCAACTCCAGAAGATTTTTC
AAGTTTTAATTTTTTtttcaaaatctatcctatcttgtagagctttgaaa
aagaaagaaaatgaggggtcataggcctccagaggattagtggttgtaaa
gatattcaaattttagtgtcaaaaatttgactaaaaatgtcaaaaaaaag
gttaggaaaatagcttggaaaatttcgaaaaatgtgtcaaaactggtcaa
aaaagaaaaaaaagaaattttccagtcatgcttcttaaattttgcatatc
tctttttctagtgtagctagagacctcaaatttggagggagaattNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacaaagtttcagcc
tccaaatacattttcctccgtttccagacacatttgtttttcgatagttg
caaattttttttctcccgtcggcaaacaattttcaaaatgtagcAAAACG
TCTGGAATTTTaacaatttgccgtctagcccgtgtccacagtgttatata
ccgctggaaagctaagattacgggctttcatttagtaaaaaccggaacgc
tttagcatacatagaaaagaggttagaagggttcaaagttcacggtaaaa
tgaaacatttggtttgacgtcaacgaaagttgcatgacttctggagtcgc
tagtCAGTGGAggcacgaccctcgacatggcccgagaattctcgggctaa
aacttttattggaattcgcgtaaagcccgagtatggcccgagctggcccg
agaattcggacCACACGCGGcccacgcacgggccacactcaggccaattt
ttgaaaacatgatctaaacaggcgtgtaatttcaggactgaatttttttt
aacattttctttgagaaaaacttggtttctcttaattatattaaatatat
gaatgttgtaaattcatataaatattaaatgtcttatttggtatgaaaac
atagttataaatatacttagggtggaaatatttgctagtaaactggtcct
ggttttaaattgaagcgtgtccacgggaagctcgtaaagtttttttgagc
gatataaacaaaacagacaaatcttattttgtttgactggacatgctgaa
tcaatttaatatttaacatggcccgaaaATGGCCCGAATGTCttgggtca
tgttcgggccaaaagaattgatagggtctctcggcccgaacatggcccga
agaggcccgagaattctcgggcctcttcgggccatgttcgggccaaaaga
attgatagggtctctcggcccgaacatggcccgaagaggcccgagaattc
tcgggccatgtcgagggtcgtgtggaggctaacatacggtagatgttata
tcggatggccaatcgtcacctttttttatttcctgtctcttatcctattt
ttctcttttctgactgtctgagactttgttttttattttctaactaCCTA
AGTTTTGATCCGTCAATGATATTTCATCCAATCAAATCATCGCACCGTAT
GGGGTTCGAACCCTTGCCAAAGATAAAGACCTTCGGTTCCGGAAGCCAGA
GCACTCTATCCACTGAGCCATCGTCGCATGCCATACCAAATTCCGCAATT
TGAAAGAACTTATATCGAACGGACAAATCTCTTTATATAGATGAaactcc
caaccctaccggtacCCCTACAAGGATNattgatagggtctctcggcccg
aacatggcccgaagaggcccgagaattctcgggccatgtcgagggtcgtg
tggaggctaacatacggtagatgttatatcggatggccaatcgtcacctt
tttttatttcctgtctcttatcctatttttctcttttctgactgtctgag
actttgttttttattttctaactaCCTAAGTTTTGATCCGTCAATGATAT
TTCATCCAATCAAATCATCGCACCGTATGGGGTTCGAACCCTTGCCAAAG
ATAAAGACCTTCGGTTCCGAAAGCCAGAGCACTCTATCCACTGAGCCATT
GTTGCATGCCAAATTCCGCAATTTGAAAGAACTTATATCGAACGGACAAA
TCTCTTTATATAGATGAGACTCCCAACCCTACTGGTGCCCCTATGAGGAC
CTTCAGTCCtttattgtgactctcgagctccaaccctgaccctaactgat
gataaccgaacccccgtcttcCAGGGTGACTTTAAGCGATGCGCGGATGA
GAAAATAAATaaggtgacttttggccatccGATCTAAGAGCATCCCTAac
atacatagccctcaaatgaatgacctggctggtcattaaaatacaaagtt
aaatcaaaacaaaaatggtagactagagctgcgtagttcatttgttttga
aattttgctgctttcattggtcagtcatttgatggctatgcaagtttccc
tgcaatgatgcaagttacccgacttcacggtagctAGTGTggcaagaatc
ttagtgcggaaatgggaatcttatacaaagcGACAGTAAAGGTGAAGGTT
ATTTAGTATAGGAGACCAGACAACCAGCAAACAGTCAGGGATACTTGCGA
AAACATTACAATCTTAGCAATCAATAAGCATGAAAATTAACCTTAGGGGA
GCCATCTAAACTCAAACTTGCCACTGAAAACGTTGATTGGACTATTTGGA
GGTGGCTATTTATTCCTGCAGTCTAGACTTAAACTCccatatcaggatta
gaaactagactaaaacaaaatttttttttttaattgtcttaatcgaaatg
gggggggggatacggaattttctatgtttagttttttcgcacaaacccct
gtaactaaaGGCAAGCATATCAAAACGTTTTAAACAGGttccgtgagtgg
tcctaaatccgacagccctgcctaaatccgaccccccaaataactgctat
gaaaaaaaattctatgtttacaaaaattccctctccaagttgaacaataa
actattgcaagaactcttaaaacaaaacatctaacaagatgactataatg
tcaagatgtcaattaatgtgatcaaaagtgtgagttgtaaaaataattac
ctctattattctgaatctgttgcatcgtgtttaaaacgttaacaattttg
taataaaaaattatgttttgtataagaagcaattattgttatttggttca
attggttaagtgtatcaaatctctcagtttagtttcTACACTTTGATATc
ctcattgcgtcacagcgaaaggtttgtttttattttagtttgtatctttg
aaagaccccattggatttaggcagggctgctgtcggatttaggaccactc
acggttaTACTCAGAAGCTTTTATTTATAACATAGTgtgaaccccccccc
ttttttaaggggggaTCCAACTTTTCCAGAAAGTGCATTATAGGGGGgat
aaaagattttccaaataaaatggGAGGTTTGAGATTTTAGGAGGGGTCAA
GTAAAAATAGGGGGATAACaacttttggtcaaaatatctatcatttttat
attgatttagatatttggtgTGGGACAACTAAAAAACAAGTGTAGATAGC
TAAATTTTCGCCTGCAGCGCCATGTTTAactcttttttcttataatcttt
tgatacaaatttcaatgtttttggttttgaaagaCTGGTTGACTGCTGCT
GAAAATAGTGCGgattcaaaatgtttttcaaatagggggatgaaatcaaa
atgggggggggtcagacccctctatgtataaacatttaaaaaagacCAGA
CAGTTGTAATGGCAGAATTAGACAAGATATGTTGGCATTACACAAAGTTA
CGATATGTCTTGGCTCCCTTTTGAATTTTGCAGATGACCGTCTTTTTGGA
CTTATGGGAATTTCCgtgaaaaagtttagaaattacaTCCATCATTTTTA
AATATGAATTTTATTAActtattttgaattgttttttttcagattgaAAT
AGAAGAGTGCTCCAATCATATTTTAAAATGATTCGAAGCATATTATCTCT
AAATTTTTACAGAAGATTTTCGTCTTTTCAGAGTCTGTTGAAGAGAAGGT
AAAATAACCCATTTTAGACTTTTTAACACAGCTTTTCTGTACCATCATGG
tgattaatttcaatttctttctaGAGAGGGGCTTCTGGTTGGTATGGGCA
ATCCTTTACTTGACATATCTGCAAACTGTGACGAAAGTTTCTTGACAAAG
TAAGATTTTAATAACTTAATTcatcatttttataatttctaTTTTCTTAC
AAAACATTTGCATTATAATATATAACTATTGCAATTGCTGTACTTAGTTG
GGCACAAGCAAAATTATTTATTGATCATTTTATTCATTCATAGATACGAC
CTAAAAGCAAATGATGCTATATTAGCCTCAGAACCTCACCTACCAATGTA
AGAGATAACCCTTTGAATTTCTGTTTAATACACTTATTTATCAAAGCTTG
TGACTGAGATAACTTATAATTGCCAAACTTCATGAGAgccttgaaaattt
tttttggatagCATCTAAAAGCATAATGTATTGCTTGCATCTTGATAATG
AAGATCCTGGAGCTGTAAACAAGACCTGCTTGGGTCTTGGGCTTGTTGAA
TGGTGAATGATTTCATTTTAAGATAAAGTTAAATTCACAACTAATGGTTA
TTTAAAGGTACAAAGAAATGGTTGACAAATTTGATGTTGAATACATTGCT
GGTGGGGCAACATTGAATACAATGAGAGTGTGTCAATGGCTGGTGCAAAA
GCCCAATGTCATTTCTTATTTTGGTTGTATTGGTATGTAttaattaaatt
attttaaaagtaTTTGTCGACATTTTTAATCTTTCTAGTAAAATGTTATT
AAAACAAGATCAAAACTATTCTTCTTTTTATCCACAGGTGACGATGACTA
TGGTAAAAAGTTAGTTGAAAAAGCCACAGAAGCAGGTGTAAACATGAAGC
CACAAGTTAATACAGAAAATGATACTGGAACCTGTGGTGTACTCATCACA
AACAAAGGTGCCAATCGATCCTTAGTTGCAAATCTTGCAGCTGCCAACCA
CTTCAAACGAACTCATTTTGACCAAGAAGTTGTCAAGAAAATCATTGATG
GAGCAGATTATTTTTATATTGGGGTAAGAATGATTACCAAATTATCTAAA
ttactttttgaaattgaagaaacGTGGTAATTATTAaattacaatgtata
gcaatgtcccctcccggttattaccataatggctttatggcaactcctga
acttggcacaggatgtacggttacacattttgtggattgcattgtggagt
cacaagagtgctcaaactgcgAGCAGTTAAAGCAGTTAAATTATTAAATT
AAATAGATCATATTTTTCTAGCCTTTGGGCaaggaaaatatgaaaaaacc
tgaactcgaaaaatatatccaatAATATTGTACGAGTGATATTgcgataa
ctggtttatcgtcaCTCAACTTGAATATATGACCAAACTTTTGATCCTTA
ATTTGCGCAAAACTATTTGAACTTGACATCATGATAAAAGCTCTTCATTT
CATACCATAGGGTTTCTTCTTAACTGTCTCGCCTGAATCAATTTTGGAAA
TGGCAAAACATGCTAGTGACAATAATAAAGTAAGACTTGTATTACTTTCT
tgattttttccctttttcgtATATTCTCTGTTACTTTGAATTAAGATCCT
TAGTGTCATTTTTCTTTGACTGATTGTATATTTCTTTAACAACAAAGAAT
GTCCTGGCTGGAAAATTCTTGCATCCTCTGATTTTGTGATTTCAAATTTC
TGTGTGTTTTGTGTGATCTTGCAAATCGTGTGAGTTTCCTGACTGCCCTG
ATTAAATCCACACAAAACTTATATATCTAGATTTCTGGCTCAAAATACCC
tgtaaattttctatttttgacaAGAATCTGTGTTTTTAGGGCCATTCTTA
ACTTATGATTTGCTGATTCGCAAAATTAGATCCAggcaaatatttttgaa
aagctattcgtgaaaataaattaaaaaactttgattttttcaggaaattg
aATCTCATAAAAATTAATCAGATTAAAGTAATATGAAATTAGTTTTAATA
ATCTTCagatatttcattgatttttccattgcttttcatttttcagtatT
GTATGACAAATTTGTCCGCTCCATTCTTATGCCAATTTTTCGCAGAACCC
ATGATGAAATTCTTTCCTTACGTTGACGTTTNCATTTTTCAGTATTGTAT
GACAAATTTGTCCGCTCCATTCTTATGCCAATTTTTCGCAGAACCCATGA
TGAAATTCTTTCCTTATGTTGACGTTTTATTCGGAAATGAAACAGTAAGT
TCTTAACTCCTAAGTACTTTTTAAGAGCAGCCTAGAGACTTAAATGGTCG
GTTTtaatgctgaaattttgcacagctATTCTTTGATGAATCCTTGGggt
actttttcattcattaaATAGTTGTTTGCGAAATTACGGCTAAAACCTTG
GTGCTCCCTGCTTGATACTTATAAGATAATTGTATTTGGCTGATATTTGG
CATCTCAAGTTAATAGCTGGATGGTTTCCTTTTTATTTGTggaatttctt
ttctttaaaattttgattttgttaaCGAACGACCATTATTGCCCTCTAGG
AATTTCCACTAACTTGCTATCATTCTTGCTGTAATGTTCATTTTCTTGAG
AGCAAGGTTTTACATTGTAAATAACAAACAACTAACTACAAGCTCGTTGA
TacatatattttgatttttttttatattttaggaAGCTGTTGCATTTGcg
aaacaacaaaattttggcgtaagtaaattctttcattttgtcAGTACTAT
ATTGCCTTGGAGAGCTGAGGTAGATTTGAAGTAAAGAAAATGAGAGATCA
tttaaattgaatgaaaaagtttaaactTACCAACCTCTTACTATATCCAC
TACCTCTTTTAGACTGAAGACATCAAAGAAATCGCATTGAAAGCAGCAAC
ACTCGATAAAATCAACAAAGGACGTGAACGAATCGTTATTTTCACTCAAG
GAAAAGACCCTACTATTGTGGCTACAGGTATAACCTCCTCATCCAACCAC
TGGACTTCAAAGTGGCTTTTCTAGTTACACCTGGCACCGACCAATTCGGa
ttataaacatgaaattttcaaaagccaACCAATAGGAACACCTCCTTTAA
GCCTGCCTGACTAAAGGTTATTTTATGTGTTTGTTCCCTAACTAATTTTT
ACTTCAAACAATATGCATTATTTTGCGTTTGATTGGGTAGAACTAGAAGT
CAAAAACTTTATTCTTACCCCTTTCATACTAAACTTTCTAGAGGAAAATG
AAGGTACTGCGATGTGTACGGAAATTACACAGATTGTTTGTTGTTTAGGT
GGTAAAGTAACCGAGTACCCAATCATCCCCATTGAAGCGAAAGACATCAT
CGATACGAACGGTGCCGGTGATTCATTTGTTGGAGGTAAAAATTTCGGTG
ATTTGATCTCTTTGCATTGCGTTTTGGGAAAATTCTTTACCCTAAAATTA
CTCATTATTTTGTAACAGCTGTTGATAGGTCTCATTTTCAATTTGCTCCT
GTAACCACCTAGTAAACAAATGTACCCTTTCAAAAGATAAGGACTAATCA
TCTCTCATCGATCCCTTCACCAGATGAACGTCGATTATTATTATTTGTAG
GATTTTTAAGTCAATTTATGCAAGGTAAAGACATTCCAAGATGTGTGCAA
GTTGGCAACTATGCTGCCAATTACATCATCCAACAATCTGGAGTAACACT
AAGTGGAACTCCCAACGTCcctgctgaataaacaaaacatTTCACATACA
CGTACGTTATCATGCTGAAGAAATAATTACTATTTGaactttggaaaata
atttatttagatattttgatagatttttttatcctgtgatttttatattt
tgatcaATCAATCCCATTGAGCAAATCTTTCAAATAGAGTACAtttaagt
aaaaaagaaaaaatagttcGATTTGATTTCTTTATCTACGTTAaggggaa
cttattttggcgacaatttatttgtttgaaattaaaaaattgtcatagtt
tttcgtgattttctaaaataacCCACCTAGTCATGTACCACACGCTTGTC
TGTTATCCCTTTGAAGGTTTggctttttttcaatcaatataGTAGGCAGA
TTTATAAAGTGTACTCGTTGAAAACGACAAAAGTATAGGACATAGTTCGC
CGTCTCGAAATTAGACCATTCattcatagaggtataaagaaaatcaggag
ttgaatgtgtcggtaattggtcgtta

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_034393	XLOC_034393	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_243	supercontig	scaffold_243:708478..718753 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.425439	0.439524	25.8963	36.6452	74.1163	63.677	111.876	85.8639	90.926	147.683	135.648	125.278	0.513783	0.276106	0	0.341782	0	0	0	0	0.449213	0	106.554	99.3859	0.542796	0	0	0.488164

Blast

[Close]

BLAST of TCONS_00054569 vs. Swiss-Prot (Human)
Match: ADK (Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2)

HSP 1 Score: 360.147 bits (923), Expect = 2.145e-117
Identity = 179/334 (53.59%), Postives = 236/334 (70.66%), Query Frame = 3

Query:  582 MGNPLLDISANCDESFLTKYDLKANDAILASEPHLPMYKEMVDKFDVEYIAGGATLNTMRVCQWLVQKPN-VISYFGCIGDDDYGKKLVEKATEAGVNMKPQVNTENDTGTCGVLITNKGANRSLVANLAAANHFKR-THFDQEVVKKIIDGADYFYIGGFFLTVSPESILEMAKHASDNNKYCMTNLSAPFLCQFFAEPMMKFFPYVDVLFGNETEAVAFAKQQNFGTEDIKEIALKAATLDKINKGRERIVIFTQGKDPTIVATGGKVTEYPIIPIEAKDIIDTNGAGDSFVGGFLSQFMQGKDIPRCVQVGNYAANYIIQQSGVTLSGTPN 1577
            MGNPLLDISA  D+ FL KY LK ND ILA + H  ++ E+V KF VEY AGG+T N+++V QW++Q+P+   ++FGCIG D +G+ L  KA EA V+       E  TGTC   IT  G NRSL+ANLAAAN +K+  H D E    +++ A   YI GFFLTVSPES+L++A HAS+NN+    NLSAPF+ QF+ E +MK  PYVD+LFGNETEA  FA++Q F T+DIKEIA K   L K+N  R+RIVIFTQG+D TI+AT  +VT + ++  + K+IIDTNGAGD+FVGGFLSQ +  K +  C++ G+YAA+ II+++G T    P+
Sbjct:   29 MGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT--GDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPD 360

The following BLAST results are available for this feature:

BLAST of TCONS_00054569 vs. Swiss-Prot (Human)

BLAST of TCONS_00054569 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ADK	2.145e-117	53.59	Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2	[more]

You are here

TCONS_00054569 (transcript) - C. hemisphaerica