XLOC_034395 (gene) - C. hemisphaerica

Overview
NameXLOC_034395
Unique NameXLOC_034395
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_243:735556..741948+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034395 ID=XLOC_034395|Name=XLOC_034395|organism=Clytia hemisphaerica|type=gene|length=6393bp|location=Sequence derived from alignment at scaffold_243:735556..741948+ (Clytia hemisphaerica)
GTCAGCACACGTGACTCTTTTTCGCCCCGCCCATCCATTTTCTCAAACTT CTAGATGTGCGCAAGGCCTTAACTCATTCGAAAattcaaacgttcgaatt ctTTGAAACGTTCGAATACtcgaatcaaaacattcgatttattGTTGTGA CATGACAACAAGctcaacaaaaaatcaaaacaagtcgTCTGTTCTGGAAC TTTTCGCCAGTCTACTGCTGACTGCCACTGCAAACCCAACGAACTGATCA TTTCACAAGAAAACCTGGTAAACTATCTTCGATACTACATCTCAAGATGA GGTAAGAATGTTTCTGTTATACGATTATACTTTTATGTGAATATTCTAAT TATTCTATGTCTATGTTATGTTTCACCGAAATAAATAGATNATACTTTTA TGTGAATATTCTAATTATTCTATGTCTATGTTAATGTTTCACCGAAATAA ATagatattcttttgttttattttctcgCGCTGGCttctttcgaaataaa tcatAGTAGATCGGTTCTTATTGCCTAAAAAGTTTTGGTCGCTACAGTGC TTTACTTACTTAGATCTATTAGACTTTTATGACTGCATAATTCACATTTC AAATCCATAAAGCCAAACGGATTAATACTTAGTTTTACCAAGAActgatt tttccttttttagacATAAAATCTGGTGATAGTCATCtcttgatttcatt tttatttattttcttcaggTCCATATCGATTACTTTGTTGCTTTTGGCAA GTTTTGTTTGTATGCATTCAGCAAATCCTGTTCTTTCAAGTAAGTCTTTT CTGTTTTTCAAATTCCTTATTGATAATTTATGTATCTTATTGTCCCTTTT AATACAGACCCATAGTAAACACCAACCCTATTGCTGGTAAAGTTTGCCCA TTTTAAAATAGAGTGTTAAATGGTCATTGAGACGGGCttagaaaaaaagg tttaaatTGGAGCGTTTGCTTAAAACCGAGAACAATCTTGTATTCCCGAA ACCCAAAAATCtatatactagcaagtagctgtcgctatgaatgccccgcc gatagcagacattagcccagaggaacttagccatgaagagagcaagggaa tcataatcagactgtaaattggtgaaatgagtcttcataaaaagtgctca atgttactagtagagctgtttaaagttaagaaacacgagccgatgcggtt aaaattttctcagtaagatccatacataacgaaagtgtcaatccaaaaaa acctgttaaatctacactttctgatgcaaatgacctaaattaaaaccatt acaggtttcgcaacatgttaagggctagaatgatatcaaagttgattttc ttcaatcaccagataaaaatcacttttgaaaacccaaacataACAATGTG CACtgtactgtgaaactgaaagtgcttccctcccataaagaatacataat gcagattaaaggtgaattccaaaatgaaattgaatacaatttcagtcATT TGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNattcacaaaatagcatcaaatactccataatccatcgttttt cggcttttgttccgcttctgtttacatttttctgctcgctgctCCCCATG CTCAACCATTTGTTTGCTGTAACAGctgtgcttcaaatgtccacgagaat gaaTCAGTTCATGTTAGTCATAGTATATTCTCATTGGCATGTCTCACTTA TAACCTTCTGtaagaaactcaatgttggtatataccagtttttggcacgt tttggcgcaaggctttactctttgaaaaattactttcgggGCACATGCAA TATCGCCCGCCAtaacgacccacggcatggcccgaacattttcaatttaa tttccttcaatatgaagtcactatataggtaaacaatatgaattaacggt caatttcccttttgtctatgcctttataatatcagTAGGGTTTCGGTAGA GCAGCGCATAGGCATAAAACACTTGCTGTCATTGAAGATGTCGTCTATCA TTCTGAAAatcgtataaggtttgatccaatatcagtagtttgatagttat tcattcagtagcaaacaatgtcctcagtaaatccagttgagcaactacgt taaaaagatattaaccaagtgccaagcaaaaatcttgtgtgctgtttgtt gtttgtgaaagcttTAGCTGGTGTGGACTTGGACTGGCAGTTCAGCCcgg gactttcgatttctcgctttctcaaatgctctgtgtaaaatgcacgaaag ttaaaaaaattatcacgaAAAAAATCGGAAGAAACATGAAtctgaacatg aatatttttctggcgagcaagtccgctacgtgaagcaacaaaagcccctg cggggcaataatcagatggtttgagatttttgcctgaagaaaccCTCTGT GGTTTCGAGTAAAATCAAGGGTGTCaaggtcagaatcacaaaattttcaa tgttatttttttctccTATTTCAAAATAAAACCACAATAGGTTGGTTGTC CCTTTGCCTCTTAAATTgccacaaattcatctcctgtcgtcAACCTTTTC TTAGCCAGAGTGATTGGCCAAACAAACAGTAAGTACGTACCCCGATTGAT CAAATATCTTATAAGTATTTCATGATTGGCCACTCACTCACCACTCACTC ACCACACACAACATGTGGTtttgttgattaccaaaaattatgaCAAGTCA TAGGCCATAGGCAGATAAGTAGAGAAAGAGGGGGAAGGGAAGCAGTTTTT CCTGCACTTATCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGATGACGAATTTGGAGAAGATCG AAAATGTGCAGGcttcaaattcttcagaatttgcgacaaaatagataaaa tcaggactgtctattctgttttttcttctaCAACCATCTAAAGCCATTTG ACGAGTCTtgacttttaacgttttgacACTAACAGCCATCAAATCCCGGG CAAACCCTGCATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA CGCGACTTGATAaacagttttcttatatttaccgcggactttaagtcagt aaaataaatctaatgacaCTAACGAATGATCCGGAAAAACAACTCCAGGT Tggctaaaaacaagctgcgacaaaaaagactccggagcatacgctgcgag tgcatgttttgcaggggtgtcgcaccgccccTGCAATTGGCTTGATTATT TCTTTACAGGAAAAGGTATTTCATGGTGATGCCCAAAACTTTGCATTGAT TGATTACCAATCCGGAACACCTTAAAAATaaccggaacagccgaaaaccg atGGAAAACggatttcattgatttttttgattacaCTCGAtagattttca ttatttttttgatttaagGAAAATAGTTATTTCCAAAATGTAATGGTGCC CAATTtcgaagaaaaattatttctggcCGCCAAATCcagaaatgtcccga aaaaaattccTCGAGATTTTTTCAtcacagtggagtctccataactcaaa cacgcACAGGGAAcacgaatttgttcgagttgGAGAAAGGCAACcgggca ttgttaactgaagggactacaaaagttgttcgagttaaggagacattcga gttaaagagactccagtgtagttttttctgacgttttgtttattttgaat ttaatgtttgCTGTTGATCAGCCAAGTActgtaggtccataaaagtatca cttgtctcTATGATGTGAAATCGATTTCACGCCCTAAAGTATTTGACCAT AACTATGCAAAATACGGTTCTAAATTCTTGATAGGTTTTATTATGGTTTT TTGATGTTTAAAAACATATTCTTGTTGTTAGGGGTTTACTTACCTTGTCG ATATTTGAAATTTGCATTTACTTGCTACATTCCATATGCTACTctacttt gtattttaaggctCGGTGTACACCTAAAGCTTGTTATTGTAAAATCGACA TTTCTAATATTTCGAACGTTTTAATCAAAGGCGGGAATTATCGACCAATC AGAGAAAAGAATttgctttgtttgtgtttttagACAAAAGCAAGAGATTT TTTGTTCTTATGCTCACATTTTGGAGATTTTGAGAGAAAGGCTTGCGGAC AcgttttctttcatttcagcCAAAGACTATTCGGGAAAAGATGCAAGAAT AATCACAGGAGATATCATGACTACAGcaaactttttgtttaaaagacACA TTCATGAAATAGCAGAATTGAATGCTGCAGAAGCTGCCAAATTGAAATCA GATACTATTCAACAAGCTATCGACCGTTATCTCAAATTCGAAGAGGAAAT GGGCCAGAAGAACCATTTCAATGCTATTCCACCTAAAGGTTCACAACCCT GAAgctaagtttttattttttattaattgcATTGTTGATGTAGGAAAAAG TTTAAATCAtgaattaaaaagattttttgaatgtACCAAATATTAAATTC TGTGTCATTCGAATATCACAAGATTTGGTCatttagaaattaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054572TCONS_00054572Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054572-proteinTCONS_00054572-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:735556..741948 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.31 1.55 2.09 2.27 1.34 1.13 1.78 1.11 0.89 1.38 1 1.01 0.7 0.73 0.64 0.24 0.89 1.02 0.63 0.96 2.24 2.99 1.89 1.93 450.99 311.08 0.63 0.68 1.17 2.24