XLOC_034750 (gene) - C. hemisphaerica

Overview
NameXLOC_034750
Unique NameXLOC_034750
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:434430..438854+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034750 ID=XLOC_034750|Name=XLOC_034750|organism=Clytia hemisphaerica|type=gene|length=4425bp|location=Sequence derived from alignment at scaffold_251:434430..438854+ (Clytia hemisphaerica)
TAGCGAAATCACCACTGAATCAAACAGGTGTTTGGGAAAATTGTGATGAT
GAAAAACGTTATATTTGCCAAGTTTCAAACAGTAAGGTCTTCTTCGCTAC
GGTCGTGATTAGATCTCGTTTAAAATGATGAATCTTCAAAGCAGATTTAG
TATCTGCGGCCTTCTATAAACATTTCGTATGTGTAATAGtcatcggacag
ttgcgagtacaataggagaaatattttacgagttccgatatttttccgta
caatatatataatattaaaatatacggaaaatccggaacgagtgaaatat
ttcttatattgtacgagcaaatgtctgataactagTTTATcggtagcgag
cacctcactaaaaaccgggatttttcatctcgtttcttagtgagttccac
tttgacgattttcgaaaaatagaagcctttcaagtgtttNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNacattcgaaaaagtcgcaaagtggaatagacgttaat
tgcgtaaaaaaacgcggggTGACGGCTAGTATAGGCtagtttatcggtga
cccaaaaaactttttgtgttggaaaaaagcgcaggacacttttgtagcaa
agtgacatTAGATTGcctctaccgctacaatgcaacaacatcttttcgtc
aatttatattttgtacatgtaaaatacaagatatattgtactctttttaa
ccaatcaaattgctgatattttttggatcgccgataaaatgTCAtaatgt
acactttttttttataagaatacactttataagaatgttcatgatgaaaa
tggccaaaaaattaagaatatgctaagaatatcaccatcatggaattttg
ctactcaagctatataaagaatgccatttttagagcattttcaattataa
attatcaattacccccaagtaaggctcactcctttcaaaAAATGccatct
tatgcttgagacgtgtGTAccaaatgttaaatctagtctgagtTAGAACC
CTAGCCTAAGAATATGCTGTAGGATGAgtttaagatgattttcccaaaaa
agttaagaatatctatgatgaaatgggtttacaccattcttataaaaaaa
agcgtgtaaaggCTGTCTCTacaaatcataaaataaaaataaaaattgaa
cgTATAtacccaactggcacacaacgttgtttcaacgtttatctaacgtt
tgCCACGTCTATATAAttttagatgaacgttgaaacaacgttgtgtgtca
gctgggtaacAATTTCAAGAAAACTGCTTAGTTACTTTCCAATAGTTAGA
TTTGTTACCATTCAAAATAATTGCCAATTACGTTGAGTGCTATTTATTTC
GTGTTGATATAGACATTGGTAATGGTAGTTGGACATCATGGGCCTCCACA
ACAAATTGCTCAGAGCCCTGTGGAGGAGGGAACTACACACAACAGAGGAC
ATACAAAATGAATGAGCAATGCGAAGAAGAGTCTGGTTTCGAAGAAAGAT
ATCCTGATTGCAATACACAGTCGTGCCAAGGtcagttttattttcaacag
ttttttaACTcgctctctcttattcgatcttAAAGGGACCAAcaaatttc
ttcgaattagagaaggaTTGGAATTACAGAGAGAATGAAATACTACcttc
cagctgaggggaccaatgttttagtttgaattattcatgatatgtcttcc
aagattttttaaaaagttcaacccaatacgtcactttttctattgtttaa
gtgacgtattgggttgaactttatgaaaattctcagaagactctccagtg
ttgcatatcatgaatagaggtTTGGAATAGATAGAGTTGACTGTACTCCT
AAAGTGATATGAAAGCTGTCATTTCAGGGAACTTGCTGATGGTCACTTGT
CTCCAGACCGAGTTGATGTTTTCTGTTAATCTGGGGggactagggttgcg
agctgacggggggtaccgcctgactttcgaccctcggatcCTTACcgaga
ctaaaaaggagaaaacaaagaacaattttgtgaattttacgacccttacc
ggaccaaatttgaccaattttgaccaaattgcgctctttctgggggtaaa
aagttgaaattttcctatttctcctacccttagtgggactgaaatttgat
tttctgatttttccgacccttagcgggacttttgNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttg
gtaggatttgaagccaacaaatcctaccaaagttgcgcggccttgagcga
cccgcctggtttttacacaaatgacagattgaaactaagatttaccgctt
aattttgaaaaatatatcactcgaaaataaaggaattgctagattcaatc
cgtcatcaaaaatacggcgcatgttttaaggcttcaatttttcttacctg
agaaaggttagagattgacctctagcccttcgggcttgaaactcaatggg
cggcacataccgtaccctccatttacccaagtacccccccccccgggNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNcccccccccccggggttaaTCTCGAGTGAAATGAGATTTAAAATAA
AGTCTGTTAAAGTCTTATTTTAAAGGTCACTCTATGATACTTTCACATTA
TGTAATTCATGATAttgatgacgtaatgttttctacggaattACACCGGT
TTTTGCGCCAGTAGTGACAAATTTTAAACAACTTTTGtatagtttaaatt
tgccactactggctaaaaccggggtatttccgtagaaaacattacgtcat
gaatatcatgattAGACTTACTCtttatgattttctttttgggTTTTATT
AGCTTCTTTTACTTTCCCAATTTTAGATGTCACTCACTTTATGTCTACCA
ATGAAGAAATGTTTAACAATGCTTCGAAGGATTGCGAAACAAAAGGAGGC
AGACTGGCAATATTCCCTGAAAAGTCTGATTGGGAAAGTTTTATCAAGTA
CGTTTGTTCAGACTACGTGTTGTTCCTGTTTTTtagcactttgagcctca
aattgttctcatCCCCGTTCGtaggaaaattattattttcattcTACTCT
TACTGATTTGAACTTGAAATTTAGCAATTTCAGTCttaggattgttctta
aattgtccTCATTTTTGTCATTTCAAGCCccactgttcttataaaattgt
gcTAATAAAAAAAGGTTGTATTATGTTACCTTTAAAACGCATGAAATGAT
TGGTTGCATCATAAGGTATTTTGTTTGCCCCAAGTTAAAAGGGTTAAGGT
TTTTAGGTGAAAATGACTTTGTCTGTTACGCTATCAGTTTATACCTAGAT
CAAATTTCTCGTCATCTGTTATATTGgttgttaagttacgtaatctcgct
gacctttatatatccctggaccaagctataccCGCCATCTTTGaacgaag
tttttttgaaagttgatacccgaaaagaagccattgtagtgtttaaAACT
TTGCCTAgcgacaaacggcgctacatcattagtgtagaagcgaaactaga
tctagcgctctctccgcgggtaccaatttcaaaaaaaactccgatcaaag
attttgcttggccggcattgagtaacttgatccagggatatataaaggtc
agagCGTAATCTCCACCAtaatggaagcaaacgttcgatttgcgcctctt
cagattcgaacgtttgcttctaTAATGGCGGGAATCTTTCTCTATGGGCA
TCGTGTAACTTGAccaaaaattattattattggtTAATTATTATCCACCT
CTTTATCCTTTTGTTATTCTTATGTTATTCTTATTCCAGTGAATCAAGAA
TTGAAGACGATTCTCAATATTGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055165TCONS_00055165Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055165-proteinTCONS_00055165-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:434430..438854 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.25	0	0.49	0.38	1.16	0.65	0.91	0	0.55	0.96	5.07	7.27	3.07	3.91	0.73	1.07	2.16	9.83	0.4	0.47	0.26	0.38	3.67	1.21	1.73	0.26	0.4	0.37