XLOC_034796 (gene) - C. hemisphaerica

Overview
NameXLOC_034796
Unique NameXLOC_034796
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:848517..854526-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034796 ID=XLOC_034796|Name=XLOC_034796|organism=Clytia hemisphaerica|type=gene|length=6010bp|location=Sequence derived from alignment at scaffold_251:848517..854526- (Clytia hemisphaerica)
CAATTTTTACATAAAAAGCACGATGTCCCCTCGAGCGTTGAGACCAAAAA GAAGTTTGATAAATAGTGATTTTGAAGGTTATAAACTAAACACAGATGGC TTAAAAGCAACATCTAAGCCACTTTTATCAAAAGTGTACCAAGTAAAGAG AGATCCAAATAAATTCACTTTCAACTATGTCAAGCGTCAGCTAATGCACA ATCATTTGTTTTTCAATCAATGGAGCAATGATATCTTTTTTGTTGATGAA AACTTAAACATTGTTCTTATACAAGCTGAAAAGGTGAGTATAAAGAGAAT TTATTTTTTTTGTCTTTAACATTCTTCATATCCTGTTATGTTCTAAATCA CAATTCAAAACCCAAAAACTAGATCTCAAAACCAANTATCTTTCTACTTC TTCATCTTCAATGAAGCTCTCAAAGTCAAATAGAATTAAGCACAAATGAT ATTCTTATAATTGTGAAATGTTGTTTGCTTTTGTTGCTACGGTGGAGTGC ATGACGTAACTCGCGCAGCAAGAAACTCAGCTTCTGTTGGCTGATGATCA TATTGGACGTCTTGGCATTACCACCCTCAAAGGAGCGCCTTTATCGTTCC GTAACTCTGTCCACCATTTTAGATGAGTTAACAATAGATCCAAAAGGGCG CCTTTATCAAGGAAGATCATTTTGCTTTGGTCTCGTGCTCTGGCTTTGGG ATGTCCTAATGTTTTCGATTGTTTTCAATGGAAAATCGTAAGAAACTTAA GTTTACAGGTGTCATTTAGTTTTTGCTGGCAGGATCCTGAATGGCTTTCC TAACTGATTTTTTAATCGATGTCAAAAATATCTTCCAGAATAAGATGGTA AAAACTTTAACATCTTGCCACAGTAAAAGAATTTCATAGGCACCACTAAG TAAGTTTGCAGATTGGGGATTCCAATTTATTTTTGTTATCACCTTTCTCC TAAATTATTTGCAGCAGGTAATTTTGATCTTAATGTGTTTTTGTTATGCT TTATCTTTTATTCATTTCTTTGTAGAATTATTTTATATTATCAATTTTTA CATAAAAAGCACGATGTCCCCTCGAGCGTTGAGACCAAAAAGAAGTTTGA TAAATAGTGATTTTGAAGGTTATAAACTAAACACAGATGGCTTAAAAGCA ACATCTAAGCCACTTTTATCAAAAGTGTACCAAGTAAAGAGAGATCCAAA TAAATTCACTTTCAACTATGTCAAGCGTCAGCTAATGCACAATCATTTGT TTTTCAATCAATGGAGCAATGATATCTTTTTTGTTGATGAAAACTTAAAC ATTGTTCTTATACAAGCTGAAAAGGTGAGTAGAAAGAGAATTTTTTTTTT GTCTTTAACAATCTTCATATCCTGATATGTTCAAAATCACAATTCAAAAC CCAAAACGATCTCAAAACCAAAAGTATGAATATCTTGTGGGTTTTATTTT AGGCTGAATTTCAGTATTATACTGTTGCCAAACTTGAAAGCCATGGAGAA GATCTGAACAGTTTCAGTCCAACAATTTCTTTTCCAACAGAAAATCTCTG CATCACATCATCAGGATGCGGTATTCTTCATTTGATGAAGATTCACAAGG ATGGTCAATCAAAGCAATTCCGCCCATTAGCCACAGGACTAATTCATGAT TTCAACACACCCATATCCATTCTCAATTCACATCACGACCCAACAACCAA TATAATACATGTTTTGGTTCTTTCCTTAAAAGACTTTGAAGAGGATGAAA AATCTGNGCTTTGGTCTCGTGCTCTGGCTTTGGGATGTCCTAATGTTTTC GATTGTTTTCAATGGAAAATCGTAAGAAACTTAAGTTTACAGGTGTCATT TAGTTTTTGCTGGCAGGATCCTGAATGGCTTTCCTAACTGATTTTTTAAT CGATGTCAAAAATATCTTCCAGAATAAGATGGTAAAAACTTTAACATCTT GCCACAGTAAAAGAATTTCATAGGCACCACTAAGTAAGTTTGCAGATTGG GGATTCCAATTTATTTTTGTTATCACCTTTCTCCTAAATTATTTGCAGCA GGTAATTTTGATCTTAATGTGTTTTTGTTATGCTTTATCTTTTATTCATT TCTTTGTAGAATTATTTTATATTATCAATTTTTACATAAAAAGCACGATG TCCCCTCGAGCGTTGAGACCAAAAAGAAGTTTGATAAATAGTGATTTTGA AGGTTATAAACTAAACACAGATGGCTTAAAAGCAACATCTAAGCCACTTT TATCAAAAGTGTACCAAGTAAAGAGAGATCCAAATAAATTCACTTTCAAC TATGTCAAGCGTCAGCTAATGCACAATCATTTGTTTTTCAATCAATGGAG CAATGATATCTTTTTTGTTGATGAAAACTTAAACATTGTTCTTATACAAG CTGAAAAGGTGAGTAGAAAGAGAATTTTTTTTTTGTCTTTAACAATCTTC ATATCCTGATATGTTCAAAATCACAATTCAAAACCCAAAACGATCTCAAA ACCAAAAGTATGAATATCTTGTGGGTTTTATTTTAGGCTGAATTTCAGTA TTATACTGTTGCCAAACTTGAAAGCCATGGAGAAGATCTGAACAGTTTCA GTCCAACAATTTCTTTTCCAACAGAAAATCTCTGCATCACATCATCAGGA TGCGGTATTCTTCATTTGATGAAGATTCACAAGGATGGTCAATCAAAGCA ATTCCGCCCATTAGCCACAGGACTAATTCATGATTTCAACACACCCATAT CCATTCTCAATTCACATCACGACCCAACAACCAATATAATACATGTTTTG GTTCTTTCCTTAAAAGACTTTGAAGAGGATGAAAAATCTGTTTCTTACGC GCTTTTGCATTGGCTTCAAATATCAAACAGTCCAAATGATGACGTTGAAA GTACTGTCCGAAATTGGAAAACTTTCAAAGGCCGTAATTTGCCACGTGAA TGTTGGCTGAGTGAGGATTACACTGAGTTGTTTGTGGCTTCAGAAACTGA ATTTGAGTTGGTCAATGTAGTAACATATGGTAAGAAAAAGTCATATTAGA TATTCTGTTACCAACTATAAGTACATTAAAACATTTAAACTTCTTCTCTT TGTGGCATATAAATATATTTCTGCCTCAAGGAAATGAGTGCTGCTATGAG GGTCTGTAGAGTTTTATCTCTGAGTTTTAACATGATAATTAAAGACTAGA AGCCACTGAAACCCTCCAAAACAAAAATATCCAATGAAATAAGTGGGACT AATTTTTGCCTGAACTCTAGATTCTGAAAAAAATACACAAAATTCTCAAT ATGAAGAAAACCTTCATGCAAACAAAAAACCAATCTGAACCCATACTTGC TTTATTATATATAACCTTTTATCTCTTCCCACAGAGAGATTGCACACTGT AAGTTCACAAGATGAAGCTGAAGATACCATCAAATACTATCATTGGCATC AATGTAAAGAAATGCTGACCATTGTTTTCGACCTCACACTAGCTCAAGAT GAGGTGGAATGCCAATTTCTTCACAACTTTTTGTCCATTAAACTGAAAAC TGGTAAAACTCTGTTGGAAGGGACATTGGAAAAAATGATTTTACAGGATG CTTCAAAATGGTATATTCAAGAAGGAAGGTAATTCATAACTCTCAAAATT CATCTTTGGCTGCTGGTATCAGTCAATTGATCTTCACATAAATTGATCTA AATAAATGTCACACACTTTTCATGGTCAATTTCTAATGGATTTGATATCA GAATAATTCTAATGAAAGGTTTTCCTCTAATTGATATAATTGAGAACAAA ACCCAATGTAATTTCATCAATCTTTTTTTTACAGATTAGAAATCGTGTTG GTCAAGAAAACACCGGGTGAGTTCTGGTCATCGGTCATTCCTGATGAAAA GCACGGTGTCCATGATATTGAGGGAGAAGAGCTTGAAAGAATGAATCAAA TACATGAGCAGCTGGAACACTTAACTTCTGAAGGCATTCAAAGGGTACTA AGATATTTAAACTTCTAAGTTTATTTCTTTTTATTATAAGACTCTTTCTA CTCTTGAACCTGCTAATATCCAACAGGAACTTGAATGTAAAAATTCAATA TTCCTGTATTTTCAATGCAATACGCTATTTCTTTTTTTCTTAATACGAAT TTACTTGTAATGTGATTTTGTGGTGTAATAATTCTATCTAAACCTTCACC AAACTGGTTGCTTTACATGTTCATACAATGCCTTGATAAATTCACTACCA TCAAACCGGAAGGTTATTAGGGTGCATACCATTTAGCCAAAAACCCCAAA AAGTGAAACAGAGGGTTTAGCGAACGCATTGATTCATTTAAAAGTTTACC TAAACAGACGATCAAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNAATGTAACAGCTTCTGTGTTTAGGTAAACAAACCCAAACCAT TTGCAGTTTAGTGAAACAGTTTCAGTTTTTTGGTTTTGAACATTAAAAGG TATGCAACCTTAATTTTTTTTTCTGTAGGAAGAAAAACATGCAAAAGATT TCAACATTCAACAATTAGAGGAATGCGATGAGAATTTAGAAGAAGAAATC AAAGTCTATAGTATAAACATCACAAATGGAAAAGTTCAATTAGAGGTGTG CTTTGTTTACGTTTTTTTTAATAATAATATCAACCCAGCTAACAAAAATT GTTATTTGAAGAAATGCAATAATTTTAACTTCTCCTGCCCTTCTCCTGCC CTCTCCTTGCATCTTGTTAGAAACAATTATAAATGGGAGGTATAAATCAG GATTATACTAGAAACAAATCCATAAGTGATGTAAATTTTTTTTCTTCTAG ACATCACTTGGTGGCCAAATGCTGTTTTCTACATCAGTACGTGAAGATTC AGTTCCCCATTTTTGTTTACGTTATGATGTTGATGGAATCCTATGGCAAC CTTCTCGTAGCAAAACAACCTTTTGGGTTCACATTGCAACCATAGATGCC TTTGGTTATGTGCTAGCTTCTAAACAGGAACATAAGTTTGTTGGTTGTTC GCCTGATTTCAGTTATGCTGTGATTACAGATTGTAAATCAAATGTTTATG TATACGAGTGTTCTCAAGGGCATTCTAAAAAGCGTGCACAGTATGTTGCA AGTTTCAGAGACAGTGATGAAATTTTTGGTTGTATTGTTGCAAAGAATAA ATTATGTGTATTAACAGATAACCATGTACATATTTTAGAGCTACCTGACC CAAATATGGATACAAATGAGCGTTAGCTGGATTATTCTTCAATGGAATTT ATTCAAAGACTTTCTTTTGAAGGATATTTTTACTGGTACTGATAAATTGA TTTGAGCCTCACATTCTAGACCACAATACTACAGAAAACTAGCTAATTCG TCTTACTTACATTGATTTTTACAAAAGTAAATACTTTAACAGCCCTCAAA TTTCAGGTCGTCATTCGGCAATACCGACCAAAGAGTGTGTATGATCGGCA GTTCATTGCCAACCATAATCATCAATAATCTCAGCAGCAGACCATTAGTG ATCTTTTTGGTCAGCAAATCCGACCTTTGAACCAAACATTGTAGCTTTCA AATAGAAAAAAAACGTTGCCGTAGCCTTTAAACAACTTTGCTGACCTATA ATTGAGCTCAGATCAGCATTGCCGACCTAAAAACGCCTAAGATTGGCCTA GATTGGCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055251TCONS_00055251Clytia hemisphaericatranscript
TCONS_00055250TCONS_00055250Clytia hemisphaericatranscript
TCONS_00055249TCONS_00055249Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055251-proteinTCONS_00055251-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:848517..854526 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NUDCD1nudC domain-containing protein 1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.21 11.51 9.91 10.66 9.32 7.48 9.44 10.58 7.31 6.51 3.64 4.13 3.71 3.08 4.88 4.39 7.15 5.75 1.32 1.4 4.07 4.56 9.84 10.81 3.41 5.47 2.92 2.51 6.31 7.36