XLOC_034881 (gene) - C. hemisphaerica

Overview
NameXLOC_034881
Unique NameXLOC_034881
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:805425..810251+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034881 ID=XLOC_034881|Name=XLOC_034881|organism=Clytia hemisphaerica|type=gene|length=4827bp|location=Sequence derived from alignment at scaffold_253:805425..810251+ (Clytia hemisphaerica)
ttgataatCTTACTGATGACATAAAGTTATATGGGGACTAACCCCCATCT GTAAAGTTACTTTCATTCCATTtagaaaaaaacattgaaaatccGAGGAC AAAAGAGAAAATTCCTCCTTTATTCCAAATTTCTCATGTGGAACACACAT AACAACCTTTTCTAAAACCATTTCCTACTCAAATCACCAACCGAACACAT GAAAATATCAATCCACAACAACTCTCAACAACAGCTTAGAGATTGGAAAG ATGTGGTGCTTCGTTTCAGAGCCCAATGGGACAATCCACGAGCTTATACT ACCTAAGGGAAGCTATGGGATTGATTGTCTTGATAtggtaagaaatattt tttcatagttTGTTGTTGTTATAACTTTATGATTCTGACCTTCTAATATT TTTGTTTGTGTTGTGTCTTGCTGTGAAAATCTCATAAGCAATGCATCTAA TTTCTTTTTATCAGATCTCGTCAAGAATTAACCTTGTCGAAAAGGATTAC TTTGGCTTGAAGTATACCAACCCATCAACTGGTGTCAATACATGGCTTAA TCTCAGGAATAAACTATCACAACAGCTCACTGGGAGGGCTCCACATCGAA TACAACTCACAGTGAAATATTTTGTTAATGTTCAAGAGCTTCAACAACAA ATTTCAAggtatttttcttgaaaattagaATTGGGAGTCCTATATCCCTT TTCTTGTGAGTGTTAGAATTGAAGTGTTGCTTTTGTGTTGACTTTTTGTG CCTGATCTGATTCgatattttttcttaaataaattCCTGCTTTAAAAGAG CGGTTGTTGTTTGACAAGACTATTAAAACCATTTGTGACAATACATAcct taagttggtctaatatcgacatccctcttctaatttcaacatccttcttt agagataggaacaataggaaggtcagaatcactgatggactcctcaactg attgcttagcaaaaaaaaataagtttcagcgattccaaccttcctatcat tcatatctttaaagaaggatgTNATTAACTTTTAGatacatttttgtatt ttgataatCTTACTGATGACATAAAGTTATATGGCGACTAACCCCCATCT GTAAAGTTACTTTCATTCCATTtagaaaaaaacattgaaaatccGAGGAC AAAAGAGAAAATTCCTCCTTTATTCCAAATTTCTCATGTGGAACACACAT AACAACCTTTTCTAAAACCATTTCCTACTCAAATCACCAACCGAACACAT GAAAATATCAATCCACAACAACTCTCAACAACAGCTTAGAGATTGGAAAG ATGTGGTGCTTCGTTTCAGAGCCCAATGGGACAATCCACGAGCTTATACT ACCTAAGGGAAGCTATGGGATTGATTGTCTTGATAtggtaagaaatattt tttcatagttTGTTGTTGTTATAACTTTATGATTCTGACCTTCTAATATT TTTGTTTGTGTTGTGTCTTGCTGTGAAAATCTCATAAGCAATGCATCTAA TTTCTTTTTATCAGATCTCGTCAAGAATTAACCTTGTCGAAAAGGATTAC TTTGGCTTGAAGTATACCAACCCATCAACTGGTGTCAATACATGGCTTAA TCTCAGGAATAAACTATCACAACAGCTCACTGGGAGGGCTCCACATCGAA TACAACTCACAGTGAAATATTTTGTTAATGTTCAAGAGCTTCAACAACAA ATTTCAAggtatttttcttgaaaattagaATTGGTAGTCCTATATCCCTT TTCTTGTGAGTGTTAGAATTGAAGTGTTGCTTTTGTGTTGACTTTTTGTG CCTGATCTGATTCgatattttttcttaaataaattCCTGCTTTAAAAGAG CGGTTGTTGTTTGACAAGACTATTAAAACCATTTGTGACAATACATAcct taagttggtctaatatcgacatccctcttctaatttcaacatccttcttt agagataggaacaataggaaggtcagaatcactgatggactcctcaactg attgcttagcaaaaaaaaataagtttcagcgattccaaccttcctatcat tcatatctttaaagaaggatgtcgaaattagaaaatggatgtcgacatta gaccaacttacggtacaaaACTAGTCATTtctattttccttttcaaaaat catcaaaccaGAAAACTGGGAATTCTTATtcaaacctgaacataataaca AAAGAATTCCGAACTGATGTAATCTTAATCTTATTTTTCAGGGACATTTT TTATTCTACAATCTACCAACAACTCTTAAATGAAGATTTATTGGACAAAA TTGGTCAACCTGAACTAAACAAAGTAATAGCTCTCATTGCACAAGTGAAA TATGGAGATTTCAATGCAGAATCAGTGCCAGAATACTCAAAACTGTTACC CTCAATCAAATGGTCTAATGAATTACAAAAAAGCGTTGAAACTGAACATC TCAACCTTGATATGGTGACCTCATCTGAAGCTAAAATccaattcatcaaa atttttggggACCTTCCTAACTATGGAATGGATATTTTCCATGTGAATTC AGTAGCAGAACATCCAGATCAACTTATTCTTGGTGTTCGTCATGATGGCC TCAGAATCTACAAAGATAAATCAATTCTATCAGAAACTGAGCAAGAGAAT TTAGTCCAATTGTAagtattttaaattaaaaacttGAATAGTTAATTTTG ACATTTAAACgtcttttaaaattcaaaattatgaATCGCCTTTTGGTGCC TTGAACTCAGGGAACTCAGGGAActcatttttgtcatttttactTTGACT ACACCAGAAAAATTAGAACCTGTGAATTACAAATTtggttgtttttcttc aaaaaacctgaaaaatccttcttaggaaaatgaaagaaatgtgtcAAACA GTGTCAAATAGTGCAAAACTGCGGAAATTAATTTCCACCAAATGCGAacg tttggaattttttttgaccaagaaaattagttcccttttaGGTACATGAC AAATTTTACAAGGTTCTCAGAAGAATTTTTCGAATAATTAGTTTTATTTT CTTACTTTCAGCATTCCTTATGATGAAATTTCAACTGTATCATATAAAGG CAAGAAGTTCACTATTGTGCATGGAAGTAACCAAGACGATCATGTTCATT CCACTTTTCTTTTGCGTAAGAATCAACAAGCAATCAATCTTTTCAGGACA TTTACAGAGTTTCATTCATTCTATCAATGCAACAGTGTTAAAAAATCGGT AATTGAGAAATGTTCCAGGACCTCAGTAGCAAGAATCCTTTCGGTCTTTT CACGTCAGGAGAGAGGCAGATTATACCTTTTTGATGTTGTTCGAACAAGA CGTCAAGCATACGATCATGCCTGGTCAATATTGAATGCCCCTGATAAGAA ACGTCAATCAGCATTTTATCACAGTGACCGTCATATCAATCGAAAAAGTG TATATAGTTTGAGTAAAGTTGACGAGGCTCCAGAGACTCACAGTAGAAGA CCTCAGTCTCAAAGCTTTGAATCTATAACTTTCACGAAAGACCACAAAAA GAAAGAAGGTAGGCTGATTTCTGCAGATGCTAACGTTAAACAATTGTCTT TGGAGGAATTACGTGAAACTGTTGAAAATCTGTTGGAGAACAAAGTATGC CAAGTTTGCATGGATTCTGAAGTCTCCACTGCGTTTTGTCCTTGTGGCCA TGTTGTATGTTGTGTGGATTGTGCAACTTTGTGTCGTGAATGTCCTCTAT GTCGGATGCAAATCACTTATGCCCAAagagttttcttttcaaatgatTGA AAGCTACAGAAATTTATTGTGTTCATTCTTATTGTTAttgtctttataaa aaaaaaactaattctaGAAGCTTGTTGTAAATATGAAGTAGTGTAAATTT ATTATTTGTAAagtgttaaaatttttaataaaaatcctTAGTAGGGTATC CAGGTTTTAGCTGGGACCAATTTATTAAGATTCATTTTTAGTAAATATCG TGTTTTTTTAGTAATTTAACTGAAAgtagacagacagacagacagaaagA CAGAGATAgagatgaaatttatttttcaaatttcatcagCTTTTTTTAGC TAATGAATTATGTATGTGTATATTGAAAATGTTGGTCTATTTGATCGTAA ATTTCAGGATTGGATTCTTGAATGTTCTGTCAGTGTCGTCTTTGAAACtt aatgaaagatttatgaGCTTCAACACatgtagatttttttctcttttttt ccgaTTCAGCTGAATTCAGTCGATACGAATTTATTTCTCAATTTGAGAAA TATAGCTGACTctcataaaaatttataaaatgacGTATTTCGGgcgttgt ttttcattttcaaagtagaTTTTGTTGGGTTTTTTATACTTAGATTctga aatttcccttttttcaaaatcaccCTTCTATTTCTAGTGGCctctttatc tttttttatggTCACTTAAgttcatagccctttttttgCAACagtagaaa taattttttcattttctcttattttgaaaatttgtttttcccataaaatt GTACTTAGATAAATATTATTTCATACTTTTGCTTTTTTCCTCATTGTTAC TCTCAAGTGCCTTAAAAGCTCCGGTTTTGCGATATTTATTAACTCATCTG ATTGGAGAAACTTTCACCTGTCAAAAGTGCATTTAAATAATTTGACTTCC TTCTTAGAATTTTGTTCTATCAAGGGAAAAAATACAGGGTATTGATGAAA GACACTTGAGAGAATTCTTTTTCCTGCGTttcaaaatatcatattttcaa aaaccgAAAAATAAAATCGAAACATTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055427TCONS_00055427Clytia hemisphaericatranscript
TCONS_00055428TCONS_00055428Clytia hemisphaericatranscript
TCONS_00055429TCONS_00055429Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055429-proteinTCONS_00055429-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:805425..810251 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.98 16.55 6.36 5.01 31.51 22.16 27.36 27.2 22.93 20.03 23.65 24.57 67.36 55.13 43.87 30.53 21.39 27.64 39.53 51.8 45.16 44.77 30.59 41.08 35.72 43.56 40.17 31.51 24.3 22.46