XLOC_034886 (gene) - C. hemisphaerica

Overview
NameXLOC_034886
Unique NameXLOC_034886
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:975020..978409+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034886 ID=XLOC_034886|Name=XLOC_034886|organism=Clytia hemisphaerica|type=gene|length=3390bp|location=Sequence derived from alignment at scaffold_253:975020..978409+ (Clytia hemisphaerica)
AAACAGACGTAGAGAGACTGTATTTTTACATGCGAGCAAAAAGATGGGAT
GGAAAACCAAAACATTCATTTTTCTGTTACCCATCATCGGATATTTTACG
TATAAACATCTCACTGATAATTTCTTATCGCATGTTATAACGATCAGTAA
CATATACCCAAATCTTCCaatcgaaaatttcgcaaaattaaatcctgaTA
TTGGAAATTTCGCAACGCCAGATAATAAGATCTTGCCAAGATATGACTTT
GTAGTGATCGGTGCTGGATCGGCTGGAGCTGTCGTTGCCAGGCGTTTGAG
TGAAAACAAATCATGGAAGATTCTCTTACTAGAGGCTGGTGGTGGCGCCA
ATATCTTGACCGAGATTCCGGGtcttctcttcaacaatttcatgTCACTT
AATGACTGGTCATATAGAACTGAAGCAGCCAAAGATGGAAAAACATCAAG
TATACATACTAAAGGTCAAGTGATTTGGCCCAGAGGTAAAATACTTGGAG
GAAGCAGCTCAATAAACGGGTTAGTCTATGCTAGAGGTAATAAGCTAGAT
TATAACCTATGGTCTGATCAAGGGAACCCAGGATGGAGCTATAAAGATGT
GTTGCCATACTACTTAAAATCTGAAGACCAACGAATCAAAAACCTAGCCA
AGGATACAGGACATCATTCTACAGGTGGTCGTCTGACAATCGAGGATGTT
GACCGAAAAGGAATTTTTCACAAACTTATGGAAGGTTGTAAGAAGGTGTT
ACCAGAAAACCATGACTACAACGGTGGCACACAGACTGGATGTGTTTATT
ACCAAAACACAAAGACAAATGGACAACGATGTAGCACGGCTAACGCGTTT
TTGAAGAATCCGCCATCAAATTTACACATAAGCCCCCTGTCACACGTTCT
ACAAATATCAATTCATGAAGATACACATCAAGCTACAGGTGTGGTGTATA
AAAAGAATGGTAAAGTGGTAATAGTCAATGCTAGGAAAGAAGTCATCCTG
TCTGCTGGTGCTATTGCATCTCCACAGGTACGATATTAtgttttcaagca
ttttcaagcaaaaaaaaaggttttagtAGTTTTAATTAGTAAACCATTCT
TTTATTTCCTGGAATGTTTTAGAATAGTTTATAGCCCCTCCCCTGGGAAA
ATTACATTAAGTTCTAGGAGGttccaaaagaaaaaagcaaaagcCTTTCC
TTAAAACCACTggaatttttcttgaaataccCCCTTTGTGAATATATCAT
GGAATTGCCCAATAAATGAATAATAGTCTCGAATTTGAGTCAAACATGGA
CAAACACAAAGAACACCCTGTCTCAAAGGCCCTAAGGAACATTTTCcccc
agtggggatgaaaatttctatcgaaaacCCAAGATGGTTTTGGAGGGCAA
TTTATGCCATTGATTTTCAAATGGGGATACAaataaagtcaatttcccag
tggggctgaaattatgtgttttttttccaaccagGAACAAAAGTTGGGCC
AAATTTTCAAGTGGGGCGGAGGTCCCAGCGgttctgtgacacagggatgt
cAAAGATTtccaacctttaaaaaaaataaaattttattcttttttagtGT
GTAAGGAACAGAAAACATACAAAGACGTGATACAAACTTGAGACTGATTT
ATATTATCCAAAATCTTAACTTTAGATTTTGATGCTATCAGGTGTAGGAC
CCAAAGAGGAGCTTGAAAAACATGGTATACCACTCATCAAAGACCTTCCC
GTTGGACAAAACTTGCAAGACCATGTGAACGTTGCACATCACATGACGTT
CAATGAATCCATCGAAACTTTGCCAGAACAGTAAGTCaataaattatatt
ttattaatgTTAATCGTCCATCCAAGTAAGCAAACGTATTTAATATTCCC
GCTAATATTTCTCgataaaagaaatactactttccTATTTTCCAGTAATG
GAAAGCATCGGTGGAATTCAATTTAGTCCTTTGAAACTTCATCTCTAACA
AGGTTTCTCATCATCATTCTNGGTTTTGGAGGACAATTTATGCCATTGAT
TTTCAAATGGGAAtacaaaatgaaatgaaaatttcccaGTGGGCCTGAAA
TTGTGTGGTTTTTTCCCACCAGGAACAAAAGtttggccaaattttcaagT
GGGGCAGAGGGATGTCAAAGATTTCCaacctttaaaaaaacttattcttt
tttAGTGTGTACAGGAACAGAAAACATACAAAGACGTGATACAAACTTGA
GACTGATTTATATTATCCAAAATCTTGACTTTAGATTTTGATGCTATCAG
GTGTAGGACCCAAAGAGGAGCTTGAAAAACATGGTATACCACTCATCAAA
GACCTCCCCGTTGGACAAAACTTGCAAGACCATGTGAACGTTGCACACCA
CATGACGTTCAATGAATCCATCGAAACTTTGCCAGAACAGTAAGTCAATG
TTAATCATCCACCCAAGTAAGCAAACGTATTTAACATTCCCGCTAATATT
TCTCgataaaagaaatactactttcgGTGAATCGGTGGAATTCAATTTAG
TCCTTTGAAACTTCATCTCTAACAAGGTTTTTCATTATCATTCTAAAGAC
AAATTCCATTCACAGTTTTCAGACATTTGAAACTTACAAAGAATATCACC
AACATCGAACCGGTCTTCTCTCATCTGGCATCGTTCTCGGTGCATTCATG
CCAGCATctgaaaaagcaaagaaaaatgatTGGCCTGAAATTCAAACACA
TTTTTATCCACACTTGATAACATCACTCCCTGTATATCAACAAATTTTCA
ACTTCAATGAAGAGTACTGGAGAAATGTTATGCTGAAGGAATTGGAAGGG
AAGAATGGTGTCACTTTTGTCAACTGTCTTCTACGGCCAAAGAGCAGGTT
TGGATGGTTGTTATTTATGAAAAGTTAAAgctttgtttggttgatgtatA
AAAacacagttgacactctctaattcgattttcaagggggggTTGAAAAG
GGAGCGTATCAAACACTAACGCGTTGTTTATGAGTGTTTCTTGCTGACGG
TGACTtttaatattatcgaataatgaagCGTATCGAAAATTAGAATTTCG
GATTAGAGAGTTGAAAAACAGGTTGTTAGGGTAAGTGCCCCATATTGCCT
GGACTAAAAGGATTCCAAATAACTGATTGAAAGGTCTCAACCGTTGACTA
TCTATCTTTCAGAGGGCACATAAAATTGAGAAGTGCGAAGGCTGACGACC
ATCCGATCATCAccacaaattattttgagcatcCCGACGATCTTACGACC
TTCGTTGAGGCTTTCAAGTTCGGGAAGAAACTGGCAGCGGCACTGCCTCA
ATATAATGCTACACTCGTTGATTTGAATGATCCAGCTTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055437TCONS_00055437Clytia hemisphaericatranscript
TCONS_00055438TCONS_00055438Clytia hemisphaericatranscript
TCONS_00055439TCONS_00055439Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055438-proteinTCONS_00055438-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:975020..978409 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.05	0.08	0	0	0	0.16	0.21	0.08	0.21	0.4	0.23	6.47	5.5	13.23	18.66	3.38	4.06	1.39	2.67	0.1	0.11	0.14	0.03	0.19	0.26	1.83	0.47	0.11	0.08