XLOC_034901 (gene) - C. hemisphaerica

Overview
NameXLOC_034901
Unique NameXLOC_034901
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:13060..22916-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034901 ID=XLOC_034901|Name=XLOC_034901|organism=Clytia hemisphaerica|type=gene|length=9857bp|location=Sequence derived from alignment at scaffold_253:13060..22916- (Clytia hemisphaerica)
TCAGAGAGTGAAGACGAATCTATTGAGGAAGATGAAGCAAATATGTCTGA TGCCAGTGGAAATGACAATGAATCAGATTCAGCTGAAAATAGTTTGGTAG GTGAAACTTTTGTTCTACAATGCTCGTCTACAATCAACTTCAAAATAATA TATTGACAATGTTTTGGGATATTTCTATTTTGGAGGGTTCAGAGTGGTTT TAAAGCTATATTCTCAATTTTTGATTCCCCTTTTTATCAAATGATGACTT TGAGTCATAATGTATAGAGAGGTCTCTGCCTCTCTTTTAATTACAATCCT GCCTTTTTGTAAAACCTATCTACCCTGAGTAACCAACATCTTTCAGTATT TTCACAAAGAAATGATAATGCATACTTAATTAGAATATTCATTTTTTGCA CAGATTGGGCTTTTCCAGAAAAAATTTGAACATGGNAGTATTTTCACAAA GAAATGATAATGCATACTTAATTAGAATATTCATTTTTTGCACAGATTGG GCTTTTCCAGAAAAAATTTGAACATGGGGGGTGGAGGATATTTTTCAGTA TTTTTCAGTGATTTACCCCCCAAACAAAGTGACTTTTGGCCCCGGACAAG CTTCAGTTGACCCCTCAGACAAGCTTCAGTTGACCCCTCGGACAACCCAA ATTACCCCCGGACAAAGCAAATTTACCCCTTGGACAAGGCAAATTTTGAT GATTTTTCGCTACCCCCGAACAATATATCTTCCACCCCCCATGTACGGAC ATTTTCTGGAAGAGCCCAATGATACTTTATGAATTGAGCAAACACAAACT TTAAGACATTTTACTGAGAAGAAAAATTATTTTAAATATAGGTTATTTTC TTAAAATGAGAAAACTTTAATATTCCTTCTTTGGAAAATTGTAAATGTTT TCCGAAAAAATTACTAAAAGTTCTGAAAAAGATTCTGAAAAAGATAAGAA TCACAAATTTTAGCCAAAGTACCAAACTACAAAAATTTTTTCCTGGATAT CAGCCTTTTGGTATTTTGGTACCCATGGTACTTAAAGGATTTTTTTTGGG GTATATCACCACGTCACTAAACAACATGATGTCTGGGATTTTAGTAATAA CCCCATGGCTAAAATTAGGTCTTTTAAATGATTTTAATCCCTAAAAGTTA AAACATATTGCGTCAAAATTAGTTTGGCACGCCAAATAAATGTAAACTTT ATTACCTTAACCCACATACAAAATCTTTAATTTTTGCTGTTTTAGGCTGA TGATGATGACAATGAAGAAAACAAAGAATCTGGAAATGAAGAACAGGAAG AAAATGAGGAATCACTCAGTGAATATGAAGATGATGATGGTGATTTTGAA GATGGCGATGATGGTATGAAGTCATATAATTGAGGCTCAAATTTCTTGGG ACCTTTCAAAAATACACTCCTGTCTCACAAGCTTTTTCCCTCAGTGAGAA TAAAAATTGGGTATTTTTTTCCACCAGGCCAGGGACGAAATTTTTGGCAA ATTTTCCATTGGGTGGGGGATCCAGGTGGTCTGTGACACAGGGGTGTAAA AATTAGGTGAGAGGAATTCCTTTGAAGGATAGATTGACTTTTATCCTTAT TTTTCTGTTCAAGGAAGTTTATCTTTCTTTATTTGTGTTGTATTTCAATT TAATTTGATTGAAAATAAAATCTAGAATACACTGCATTGCCTGAAGAATG CGCCAGCATGAAACACTGTGTAGTAATGTAAGTTAGCTCTCTATTTCTCA ATATTTTGCTCGATTTTTTTCAAACCTTCTTGAGCACGTAGTAATTCTAT TTCTTCATTATATTTACATAGGTATGATGAATCTAGACCTCAGTAAGATT CCGAAGGAATTACTCAGAGAAGATCAAGCTACACTTATTGCGGATGAAGA TGAAGAAGAAGATATTAATAATTTCATGGCTATCAATCAATCCAGTGAAA AGAGGAAAGGCGAAGCTACCAGAAGCCAGTTAGGTACAAAGAAAACCACT TTACTTTGCTTATTTTCTTTATTTTCTTTATTTTGTCTAGAGCAATAAAA ACAAAGAAGGGTATTGAGTATGAGAATGAGTTCATTGGTTCAAAATTGAA AAAAACCTTTCAGAATAACGTGCGTATTTAATTTTTATGCCTTCATTTTG AATTTGTTTTTTTTGTTCGTTCAAGTAATATCTAAACAATTAAAGTTGAC TTAAATTTCAGCTGTGTCCTTTTTTCATTAATATAGATATTTTGGATAAA CTTCTTGAATCTCGGATTCGTCTTCAAAAATCGATGCAAGTAACAAACAC TTTGCCACAGAATAATCAGATGAAGAACTTTCTGAAAGAAGGTGGACCGC AGATACAAGAGGCACATAGAGAAGGTATGATGTCTATTGAGATTACAATT CAAGCAAGTTGAGCCATGCATTTCGCCTTTTTTGACATTTTTTTAAATTG ACATTTTAAATTTTTTGAACTTTTGAACCAATGAAGTAAAATTTAAAAGT AATACATCAAATTTTAACTTTCCTATGAATGATTCTGAAGCAATATTTGA AAAATCTTTTTTCTACTGCCTACAATATCAAATCAAAGAGGGTAACTTAT TTGTGGCACACCCGGTAGAAAGTATAGGCTTATTCAAAAGGCTATGTTTT ATCAGGAGAAAAACAGGTTAAGTGACTAATTTTTGGAGATAATAACCTAA TGTTTCCTGGCAAAACTTTTTTGTTATATGACGAACTTTTCCCAAACTAA AACATCTCGGAGTAGCTTTGTTAGAGTAACTAACATAAGTAAGATCAACT GTTTTTTTGCATATTATCTAAGATGGAAAAGTGATTCTCAATGCTCATAC TTTTTTGTGTCAATAAAAATAATCACTCCTCTCTCGTCCAGCCAAAGCTT CATTGACTGGGATGCTGAACAACTTGTTGAAACTACAAGAAAAACTGTTC AAGGCCACAAATGAAACAAAGAAATTACTTAGCAGTGAATCAACAGCTGA TGATGCCAAAAAGAGAAAGAAGAAGAAGATAGGTTGGTTTGGAGGGTATT CAGGATATGCACCACTGCAATGTCTTCTGACATTACGTCACTTGTAAAAG AGCTGATTGGTTGCAAGTGGTGATATGGGTGGAAAAAAAACAAAAAAGTT GCATAATTTCGTGAAGTCATTGCAGTGGTACATAACATGTATTATATGAG TTGTTTTTTAATATCAAAACTCTCATAAGACAATTTACGAATTAGAATTC AATTTTTGTGAATCACCAGGATAATTTAGTTCCTGGAAATTTAGTATTGT TATCTCTTCGAGCATTTCGGGAAAATTCCGTGATAACTCTTGAAATCTTT ATCCAATTGACCAAATATGGTCTACACCAAATATGAATGAGTATCTTTGG TGAAAATTTTGGCTTCATTGATGACCTCATCATTCTTTGAAAATAACGAA AATAGGACCTCCGTACATCCCGAAGTGTGGAAAATTTTCGATTTTACAAA AAAAAAATTTGCAGATGTTACTTCCATTCTTTATTTTAAATTGTGGTGAA GCCCATACTTCCTGGATCTTGTAAAAAATGGTTAATTTTTCCTACAGACG AGGACGAAGAAATACCGAGTGATACAGATGATGAAGCGAACAAAAGTGAA ATCGAAAGTGAAAGTGACGCAGAAAATTTGACTGAAGAAGGAAATGTATT GAATTTGCCATCTAAACGTAAAAGTAACCTTGTAAGTTGTTCATCAGGCT CTCATTCTACTACTATGTTCAAATAACTGTATGAAAAATTTATGATCGGT AGGCATCCTCTAACAAATAATCTGTTCACGGCTCTTTTCTGAACTTTCTG CAGACCTACTCTGAATTTTTATGAAGGAAAATGAGAGAATTTTATTTTAT CCATGGCAGCCCATAATTTTGTTTTCAGATTTCTTGTCAGCTTTTTTGAT TAGTTTCAAACAGTGCTTGAAACCTTGTTGAAACACGGGCTAAATAATTA GCTCATCTAGTTTTGTTTTCAATGCAGAGTCTCGATGATTACGAAGAAGA ATTGAGTAAAAGACATAAAGCTTTTTGTGGTTATCGAGACACAACCATTC TCAAATGGTATGACAAAACAAGACTCATGACCGGTAAAATGAACAAGGTA TACCTTCAACTACTTGAGACCACAATGTTGTTTAATTTCTAGCTTAAATG GAATTCACTGTTCCGAAATTCAGAAAAAAACATGGTAATCTACTCGTCAA AATCTATAAAAAAACTATCTAGCATGCAAAGAAACAATATATCCGTGATA TCTATTGCTGGTCGCTGAGTAATAATTCATTTAGGGATCTCTGCAACTTG ACCATTCATGATAATTATGCACCATTGCAATGTCTTCCACGAACCCAACA GCTGATTGGTTGAAAGTGACGTATTGAATCAGCTATTGGGCTGTAGATGT AATATCTGAAGACATTGCAATGGTGCATATCATGAATTGTCCTTTAGTTT TTCCAGCAGCTAAAATAAACTGTTTGTTTTCATTGTTAGGGATTCAGTGC ATTTGAAACATCGACGTTACAGCAAATCAAACAGGTACAAAAACGTTGTC CTTCACCATTGTAAAATAAGCTTAAGGTTAAGGTAACTAAACTGCGATTT TTTTTGGTCAAATAGGTTGTAGTATTACATTACTGTTAATATGGCCAAAA TAAGCATATGGTACGGGCTGAAGCACTCTTAGAGGAAACTATAATGGTGC ATTAATCTCTGTATTTTTAGTATTTTTAGCAAGTAAAGGTAAATACTTAA TCTTATGGTTGTTTTGAATGTTGATTAACTTTCATTAGAGCAAGTTTATA GGTGTCACAGGAATTTTTCCTGTTATAGAATTTTCTTAGGATAAAAAATG GGGGTGAGGGTAGGATGTAGATTAGCTTACTCGAATGTCAGCCGATGAAA GAAGAATGGGTACTGTATTTTGGCTCCGTTTCAAAATCGACTCTATTCAA TTCGCAAGAGAATTCACATTCTACTTTATTATTTCATTGTTAGGTGTTGT CAGATAAGAATCGTCTGATGAAAAGATGTCAGTTGAAACGAACTCAATAC AAAATACTTGGAAAGTCTGAAGAAGAAGCAAACCCAGCGGAGGAGGTACT CTCTTTTTGACGCCTGAAATGTAGAAGGTTCAAAATTGTCTTTTCAAAGT TAGTGAACTCAAAATCACTGTGATAGACCTGCCAACAAATCCTTGTTCTT CGTTCCTCTTGCTTCAGACGAGGATGGTTGATTATATGTAGACAATTAAC ATGAATTTTAGAAGCGAATGTGTTACTTGGCTATCTTCATCCCCGAACTC TAAAGTAATCACTGGACTTATTACGATTTTTTTTATAAGAACAACAACAA ATTTTGAAGCCTTTCGATGTTCTTAACATGTTCTTATTTTCACCATTGTG TGGGTAATTTTGTACATTTTTATAAGAAATCGGATGTTTTTGAGTCCACA AAGCCTTAAAGTGTTCTTAGCTCGTTTTTAATATTTGGCCATTGAGACCT CACGTCCTTATAAAGTTTGCTCTTATAAAAAACGTGTCAAAGATTACGAG CAACTTCCACAGCTCCATTTACCATTTTGAGACACATGACGCTATCTTCC AGACAAAAATGTCAACCATTTTGAGATACAGGCTGGCTATCATCAAAAGA AAACGGAAGTTGATTTTAGAGATACCCACGCCTGTCTTTATTCTAAAGTT TGGTGCGTTCTTTTCAGATTGTGTAAGACTTGTATTCTCTTTTTCAGGTT GATTCTCATTTGACAAATTACGATGCGGAGATATTTGATGACAGTGACTT TTATCATGAGGTATTATACTCTTCAAACCGTTCAGGGTCCACCTTTAAAT TAAAGAACACTTATTTTGTGACGTGAAAGAGGGTCCGATATTCAATCGTC CCTGTGCTTTTATTCGGGGGGGGGGGCGTTTAAAAGGAGGAGAAGTTTAT TTGAGAGGGCGTTTGAAACAAGTTGCGTTTAACCGAAGTTATGCGTACCA CAGTAGACTCTCGCTAATTCGAACTTCTATTATCAGAATCTTTCTATAAT TCGAACTAGCTTTCATTCCCCGTCAAAATGCTTTCAAAAATTCGAATCCT TCGTAATTCGAATAGACTTCCTGTTCGACTTCGAATTAGCGGGAGTCGAC TGTATCAGCAAAGAAAGCGGGTCAGACTTTACAGTTGAGTTTGATTATTC ACCAATTAGATTCAATTATTTTGAGGGGAGAAACACACGCTATGTATAGT TCAACTCAATGAAAACTTTTTTAGAATAAGCACAATTAATCTGTACTGTG TTGAAAAAACATCGCGTGGCTAAGATGAGGAATTTCCTTCGAGTAATTGA AGTAGAAACTTTTTTATCCTTCCAATCGAATATTAACATTGGTCAGTCGC TTGAGCAGCAACTGAGGTTAATGACTACTCTACTTCTGGCTAAACTTTGC TTTTTGGTGATCTTTGATGACGCTGAGTCCAATGAAGTAGACTAGAGGAT TTGACGAAGTCGCCATTTCGAAGAAAAACACAAAAAATCCGAACAGCAAA TAAAAACATTGCTTCATCCTATTTTTACCTTCAAAAAACAACTTAAATAT AGCAGACTGTTTTACAGTCTGCTTAAGCAAAAGCAAATTACTGGTTATAC TACCGGGCCACTAAATCGCGCCAACCAGTCTATGAAAAAAGCTTTAAGTG CAGTCCGGGCTAATGACCATCGCTGTGGTATAAGCGCCACTGTTAGAAGA CATACCCATATCTATATAAGCATTGTAAACCTTAACCCTAAATTTGTTTT TGTTTTCTTCAGATGTTAAAGGAATTAATTGAGCGGAAATCAAATTTGAC CAACGGTAATGAAGATGATCCTATAGCTAGCGGAAGGTATATTTGTTTTC CTCTACAAATTCCGTTTACTCCTGATCCTCATCAAATGTTTTGAGATTTA TAAAACTCATCAACGAGCAAAACCTCCTTTATCTTTTGACCCGATTGTTC CTAAAATTTGAAATTTTCATAATTTTGACTTGAAAACAAAACTCAACATG AAAACCATAATAAATCAATTTTTAGATTGGGTCAAATGATTCGATATTTT TTCTAAGGATGTTGCGGAGGTGTGACGTCCAGGGTGGACTGGAAAGTAAA AAAATCAAGGGGTCTGGTTTTTTGAGTGTAAAAATCCAGGGTGGTCGGTC AAATGAGGTTGAAAATCCAGGGTGATCATTAAAGCGAAGTCAAAAATCCA GGGTGATCATTAAAGCGAGGTCAAAAATCCAAGGTGATCATTAAAGCGAA GTCAAAAATCCAGGGTGATCATTAAAGCGAGGTAAAAATCCAGGGTGATC ATTAAAGCGAGGTAAAAATCCAGGGTGATCATTAAAGCGAGGTAAAAATC CAGGGTGATCATTAAAGCGAAGTCAAAAATCCAGGGTGATCATTAAAGCG AGGTAAAAATCCAAGGTGATCATTAAAGCGAAGTCAAAAATCCAGGGTGA TCATTAAAGCGAGGTCAAAAATCCAGGGTGATCATTAAAGCTAAGTCAAA AATCCAGGGTGATCATTAAAGCGAGGTCAGAAATCCAGGGTGGCTAAAAA ATGAGAAATAAATCCAAGGGGTCTTAAAAAATTAAAAAAAATCCAGGGTG TCACCTTTCCCAAAAAGGACCTCTTCAACATAGGGGGTAAAATCTTTTCT AAAATAGCCCGTTAAAAGGTATCGAGCTAAATATTAAAAAAATTCTGGTT TACTCTTTAAACTTTTAACATCGACGTCTCTATATCAGACGATGGCTTGA ACTTCAGAAACTTCGCACCAAGACCAAGCGTAAAGTCGACACGAGAGCCA GTAAAGGGCGAAAAGTCAGGTAAGATTATCCTGAAAGATAATAGTGATGA AATTGATTGAATGTCCTCTAAATAGCTCTTGAGAGAAAACTTAGCAACTC TAACGCCAAAACTAGTTTTAAAGAAATCTTTGAGACTCGTAACCATAACT GGTAATACACCTATCAAATCTTAACGGTGAGGTCAGCTTTTAAGGGTACT GGCGATGGAACAAGTGAACTTTTCTGACTACGGTATTGAAAATAAAACGT AGGAGCGCTTCTGTGAAAACTGTAAGATAATAATTCGGATTCTTAGGTGG TCTGAATCGCGCAGACTTCTGCAAAACCACAGGTAATATGTGGAGCACTA AACCGTTAGTGGATACAAACAGCCTCATCCTTCTAAAGTAAATTCAAAGA AAATCCTTGTTGCCCTGAAGAACAAATTAGATAAAGTCGAATGTTTTTCT ATTTCGCATATTCTTTTATCTTTTTGTCTTTAGATACGACATTCACAGTA AACTAGTGAGTTTTATGGCACCGCAAGAGATCGGGAGCATGTCAGATCAA GCTAGGTATGCTTTACAGAGTGTCATTTAATCATCGACTTGTCTTTTAAC CCCCTAACCCAAGGCCATTTCACAGTCACAAAGCGTAATGGGTAATCAGG ACCACTACGTGCTAATAAAGACTTACTATTGGTTCAAAGTTTTGAAAAAA ATTGAAGATTTTTGCGTCTAACCAACCGGAAACCGTTATCAGGGCGCAAT AAGTCCTGATTACCCATGATCCATTTCGACTGTTAAATTGCCTATTTCCG CCATCATTGGTCGGAGTCTACAGAAAATTGGTACCTTTATGGTATTGCAG CAGGTAGTTTTACTCGATATGGGTCAATTTATAATACTCTGGGGTTGTCC GTTAAAACAATGATGACCTGCATCGAGTAGTTAAAACAGAATTAAGAATA AAAACTACAATTTTCTCCAATGTTTGTAAGGCTCAAAGCTTCTAATTACG GATGGAAAATATTTTTAAAGCTCTAAAGTTTATGAAAAGGACTTTCCCCC TCCAAGCTTTTACTAAACGATTGTCGTAACTGTTTTAATCCTCCTAGACA TTTTTCTAATTTGTTGGTGTGACATGATGGCTCTTCTCATTTCAGTCTCA TCTTTCTCCTAAAAACGTGTTCGTCTTACTGCAAAGTTAGACACGCTTTT CCTTTTATCACAACAGTTCCTTGCGAACATAAAGCTCAATCTTTATCGCA AAATTTACGAATAATTTCATAACAATGCATTGTTCGAAATACAGAAAGAG CTAATAAATACTGAGCATTTAAATGAAGAAAATATAAAGAACAAAGATCT ACAAAATAATTCAGCCTAAAAATGAGATTAGCACGAGAGTTAAATTTTCT CTTACTTAAAAAGCAAAGCGTGTTTCTTTCATTTGATCATGACTTTCAAA ATTTACATTGCCCTGGGGCGAAAATAAAGAAATGTAGTGTTTCTGGAATG CGGGTGAAAGAAAAAAAGATTTCATGCGGCCGGCCGGAAAAAAATTATTT TTTGCTATTTTTATTAACGAGCAAACCTTGATTTACAAGTGGGAATATCT AACCAAACAACGTTTGATAGCTTGAACGGTCAACTTGATTTTCTTTATGA TGAACCATAGATGAACCCATAATCTGCGGCTGGGGCAGAAAATTTATTTT TTTCACCCGGCCGGTTTCCGGAAACACAACATTTTTTTATTTTCGCCTGT CCTTAATTTTTTTTTTTTTAGAAACGATCTTTTCTCCTCACTCTTTGGAG GAATGGTGAACAATGACGTCATTGGTAGGTGATCCATCATGTGAACCGGC AATGGTCGTAAGAAACTTTTTTATAATTTTAGGACATTATCGTATTATAG AAGAATTTATATTCCATCAAGGAATTCCTTGGAAATGGTCTTGAAATTAT ATTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055466TCONS_00055466Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055466-proteinTCONS_00055466-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:13060..22916 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AATFprotein AATF Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
35.37 32.61 13.88 12.24 44.44 32.09 30.24 29.95 26.51 24.02 21.57 28.68 32.19 37.17 24.53 27.4 21.5 25.21 5.67 7.22 24.79 22.84 42.28 38.16 34.18 37.34 7.1 7.46 25.24 33.96