XLOC_034942 (gene) - C. hemisphaerica

Overview
NameXLOC_034942
Unique NameXLOC_034942
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1079854..1085228-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034942 ID=XLOC_034942|Name=XLOC_034942|organism=Clytia hemisphaerica|type=gene|length=5375bp|location=Sequence derived from alignment at scaffold_253:1079854..1085228- (Clytia hemisphaerica)
CTGGCAGCCTGGACACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCA CACTTGTTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAA ANGCATAAAGCTGACTATATGGTATGTCAACTTCATAGTATTGCATTTTA AAAAACGTTACAATGTACTTGCGTATTAAAGTAGATATGATGAACACAAG ATAAATCTGTTTTTTTTTAAATCATTCTACGAAAGCATTCTATTTTATGA TTCAAAGAAAATTGGCAATCCGCACATGATACATGTAACTTCGCTGATTT CAAATATTGTTTTTAGGTTTTCATAACTTTCTTGAAGCAAAAGTTACAAC CCTTCAAAGTGGGTCCATTTTGGCCATTTTTGTCAATTTGTGGCCATTTT TAGCCTACTTTGAAGGGTTGTAACTTTTCTCTAAGAAAGAAAACATATTT GAAATCAGCGAAGTTTCAATTTCCAGAAAAGTATAAATTCATAATCTTCA TTTTTCTATCTTTCATTTTCGAATTTTTTGAAAGGATTTGAAGTCTTAAA ATCATCCGCCTAACATTATCTTTTCAACGGAGGTATTGCTTTTAGAGCAA TGTATCAAAATGTTTTTTTGGAACAGCCTTTAGGTGTTTCTAAATTTTGG TTATCAGTCACCTAATTTTTATTTGTATTTCCCATCAGTCTTTTCCCTAC CCTAATGATTTATGATTGAGGTTTTTGCTATTATGATTTGAATTATTTTT CTTTGTCAGAGGGACGAGATCGAGCGAGGGCACGGTTACGTCGAGTGCGT TGTCAACTATATCGAATATTTGGTTGGTTTGGAGCAATCAACCTCCAAGA TGTCTTCTTCTGAAGGCCTTCAAGAGATCTTTCAAATCACATCAGATAGT TTGAAACTAGTGGAGTAAGTCCTGTTTGTACTTTTTGTGCCTTTGATGAA ATTTTTCAGTCATTTTGAAATCTAGATCTTGAATGATGAAATGCTATGTT CTTGATATTTATAAATTAACGTAATGAAATGATCAAACTAAACTTTAGCC GGTTTCAGAAAGAATCATTTTTTCATTTTAGTGATAGCCCACTATTAATG ATTTCCATGTAATTTTAGGTACCTTGTTTCGACTTATGGTCGAAAAATTG ACCCCCTGATAAATACGTATGACAAAAGGTTTCTGTTTTTATGGTAAGTT TTAATTCGTCTGTGTCTTACTGTATTTGAAGAAAAAATGAATGATTTAAC TTACAAAGAAAGAATCGTTTCGAAGTCATCACTCGCGTAACAGTTGCGTT TTATTCCAAAACAAAACGAACCAATTAATGCCCAGAGATGGATTTATTGT TTTGGAACAAACAGGAACTGTAACCGGCTGAAAGTGTAGCGAGTTCAAAA ATATCGCGAAGTAGAATAGAAGCTACTGCGTAAAAGATACCGCGACGTTA CCGTGCTTTTTCTTTTTTAGCTTGCGGTTGCAATCCATCCTCAATTTGAA GTTGTATAAAATGAAGAAAGAACAAACAAAGAAAAACAGCAAGGTACGAA AAATGAAAGGGTTTGATGATGTGAACACCAAACTCGAAACGTCAAAAAGC ATACCTTACAAAACGGTTTCGTTCAACTATGAACTATGAATCTTTTCCGT TTTCTTGCTCCGAACCCTTCCAAACCCAATATGAACGATTCTTAATTGTA ACGGAAACCGTACCGGAGCAATGTAAAACTTTGACATCTGAGATCTATAG TTTTTCTCTTATTTGACACATTTCTAATGTATTTCACCTTCACTTCTCTC TTTCAGATTTTGTCAGAGTATTATCGGGTAAGTAACTAGCCCTTCAGTTG ATTTCAAGGAATAATCGGTAACATTTCTGGTCTAGGTATAACACCTACAG TCTTGGCCGAAACCGTACCAAAATTTATTTGTTATTTCATTTTCTTCCCA TTTTGCGATCTAGGTTCTAATTTTTATTGGCGCAAATTCGATTAAAATCT CAATCTCGATTTTGAAAAGGCATTAAGCAGAAATAATTGTATTGGAGGTT TTCTACGGAGAGCCATAGCCCAGAATAATCACCATTGATTATGCGCTTTT AAAAGTTTTCATTTAAATTGTTGTAAATTGGAAATAATAATACCTTCTTT CATCATTTCAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTTAT TCTAAACCAAATCAACGAGGGTAAAAGATCATTCAATATCTAACTTTTCC TTTGCTGCGCCTCACTTGTGACAATGTAATCATCACAAGTCAAAATACTA CCCCTGTTCTTAGAAGGGAAGTTCTTCATCGGGAAATTGGTTAATGTTTT CTGCCACAATTCCTTAGAATTTCTTTTCATTGCTGTTGCTTTGAATCCAT ATTGCATTATGAATAAGAGAGATATACAATGGGAGCAACAAATTTTTAAC TCGACTTTTTCTTCATTACAGCAGCACTGGTACACCATCCCCCTCCTCCC CCATTTCTGACCCCTCCCCTGGTGGGAGCGTGGCATCTACTGGAAGCGCC GGTAGCAATAGTAGTAGTAATGGGGTCACCATACCATGTGATATGCATGA GAAGAGTTATCAATACCTTTCTAATACCAAATATCTTGTCAACGGGCACA GACTTTGGGATGACTCTGAAAGTTTGACCAATCAAGTGCAAGGTTTGTTA TTTTGGATTAGTACTATATTTTCTTTTACACTATCGTTTGATACTAATGA TACTTAATCTCAAATTGTTCCCTTGTGCTCTGAATTTTTTATTTTTTTGG ACCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTTGTCCGTT CGTTCGTTAGTTATTAGCTTTCCTCGCGATTGGCTCGTTAGTTTTTTCTG ATTTTTTGCACAAAGATGCTTAACTATAAACCCTCGAATGTGACGGAGCC CGATTTTCAAAAAAAAAGATTTTTGGGCAAAATTGGGCAAAAAAACGGCT AAAAAACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTAATTTTTTC TGATTTTTTGTATGAAAGTAGGGTACCATCGTAGGTAAAAGATGGTTTAA GCAGATTTTTGCAAGAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCT ATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACT CAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTTTTTCTCATGAGGGCTTACTTTTAAAGAATATGTGTGTTTCGACAT GAAATTTTGGTTGCTTGGCGTGTTTTTATAGAAAAACTGGCCAAATTCTA TATATTCTTATAAGCGCATTATCAATTACTTAGGTATTAGCTTTTCTCGA GATTGGCTCTTTCATTCTTTATGATTTTTTGAACAACAAAGATGCATAAC TATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAGAAAAAAACTTGG GGGCAAATTTGGGCCAAAAAACGGCTAAAAAATGGTTTTTTTGGACTTTG TGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCAGGAAAGTAGGGT ACCATCATACGTAAAAGATGGTTCAAGCAGATTTTTGCAAAAAAATTTTG TTGGCTCAAAATACGCATGTTTATCTATAAGAATCACTATTAATAAGCAT ACATCAATGTTCTTAGTCAAATTACTCAATTTTTTTTATGAGATAGATGT TTTTTTGCTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTTTTTATAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACA CTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTTATTCT TTATCATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGCGACG GAGCTCGATTTTTGGAGAAAAAAATTTTGGGGTAAATTTCAGCTAAAAAA TGGCTAAAAAAAGGGTTTTTTGGACTTGTTTTTTTTCTGAATTTTTGCAT GAAAGTAGATTAAAGATGGCTCAAGCAGATTTTTGTAAAAAAAAGAATTT TTCAGCTCAAAAAGCGCATATTTATCTATAAGAATCACTATTAATAAGCA TACATCAATGTTCTGAAAATTACTGAATTTTTTGATGAGATATGTATTTT TGGTCTCGAAGTATTGAATATGAAAGAATATTTTCAAGAGCATGAAATTT TGCTTTTTAAACGTGTTTTTTTTATAAGAAACAAACGACTAATTTTGATA GATCGTCACTATTTGTGTTCTAAATGATTGTTTAATGGTCACGCTTATGT AGATATTAATTATACATTATATATATGTGTTAAATGCATAACCAGGTAGG TCCATAAAAGTATCACTTGTTTATTTTTTATCAGGTTTCATCCAAAGTTT GTCGAAGAAAGCAGGGATACTCACCATGCAGAGGTACTTGGTTAATTTAT AATTTTTAGGGTGGTCTTCATTTTTCTTTTGCTTTTTCTTCGTCCTCACC TTTTGTTTCGATACCCTATATATCTTGATTGTAAGCAATCTTAGATCTAC ACTCACTGTTGTTACCTATCTACCCTCATCTTCGAATTCCTTGCGAACGA TAAACGTGAAATACCTTTGGTACTGAGTTTCGCAGACCTGGATGAACCGT CTGAATATCATATTTGCGTGTTTTCAATTCTGAAACGTGTCATAAACATA TTCCTTTTTTTCATTTTCATCCAGCACGACGCTACATATCGTCGATTTCA CTCGTCAAGGACTATTAATCATACAAGAATCGAGAAAAGCTGCTGTCTCC TGACATTTGTGAGTATTTTGGGTGCTTGGATGCGTTCGTCCTGTGTACAA ATTCTCTCATCTTTCAACAAATTAACATATTAAAGCTTACACACCAAAAA TGAGATTTTGTTTATAGTATTTCTTACAGTCCACGTTCCAGAGGGCTTTT AATTTAAAAAACACCCCCGTTCGAAAAAAGTATAATATTTTGTCTCTTTA TAAATATCTATTAATAATTATAGTATTACGAATTTTGCTAAAAAGCATTC GGATTATCAAATTTTTTAAAAAGTAATGTCTCCATCGATATTTTGTTTGT TGTTGAATTTTGAAGGGAAAAACGTCTGGAGGTCTCAAATTGTAACGAGG TTTTGTACATTCTATTCAATATTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055558TCONS_00055558Clytia hemisphaericatranscript
TCONS_00055557TCONS_00055557Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055557-proteinTCONS_00055557-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1079854..1085228 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.63 4.33 6.03 5.6 23.28 15.81 13.66 15.44 11.88 13.93 16.03 12.27 15.97 14.46 11.89 14.69 15.83 16.34 15.13 13.53 18.13 19.44 15.28 18.08 14.94 16.87 22.03 26.36 27.4 27.96