XLOC_035116 (gene) - C. hemisphaerica

Overview
NameXLOC_035116
Unique NameXLOC_035116
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_259:9624..14157+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035116 ID=XLOC_035116|Name=XLOC_035116|organism=Clytia hemisphaerica|type=gene|length=4534bp|location=Sequence derived from alignment at scaffold_259:9624..14157+ (Clytia hemisphaerica)
CAACATATTATAATAGTATAGCGCATGAAACAAGActatttttttgaagt ttttctttctgCTTTTTCAATATCTTTTCATTTGCAGGAAAAAAAGTTGG ATTTACACATTATATAAAATGGACGATCTTGTGGTGCACATTGTTTCTGT CATCGTTGGGTTTATGACAGTACTTGGCTTGGTCATTCTGCTTGCTCCAA GATATATCTTCCTTCTTAGCACCAGGTGAGGCTTTTTGTATCCTGTTTAT TTAAGTTATTATTGTATCGACATTTTTCTTGCTCTTCTGTCCTGTCAAAT AGTGATAAATTTATCTCTCTCAAATCCTGTGTTCACTTCAGTTGAGCTAA AATCTGAGAATGTCTATGTGTGCGAGTGTGTGCGtgtgtcccaaaacttt ggggcatgctggagacttcaaaattggttggatttggctgaaaaaaaaat ttaggggCCTGGTCACTTGTTTTTTATGTGTTTTTGGCTCCATGAATAAT ATGCTGACAAAAATAGCTGTGTAAAAAACTTTCTCAAGTGGTACTTAACG ATAAAATTAATGCAATTTATTTTCACCTTAGATGGAAGACGTGGTGGTCT TCATTCGGGGGTAAGAAATTCATAAAAGTTGAGAAGAATGTTTGGGCATG TTATTGTGAACGAAACCAACTAAAAAATACTAATGCTTCCATTTTACTTC TTCATGGATTCGCTGGCTCGACTTTCGATTTTGTCCCTTTTGTTGAAAAA CTACCCAAGAACCTACATATTATTGCATTAGACCTGTTGAACCACGGTGA AAGTTCAACTATTACCGATCGTGACGTCACCGTTACTGATATGGCTCGAT TCGTGAAAAAGGTGATTATAGATTATTTTTCGGAACTGTATCAANAACCG ATATGGTTCGATTCGTGAAAAAGGTGATTAGATTATTATTTTTCGgaatt atataaaaaagtaaCATAACAATTTCTGTCATCACTAAAGATTTACATTT GGCAAgattggtaaaaaaaatttatattatgTGTTATTGGTTCCTGAATA AATTCCGAGCTTTGTTTTATCCTTTTCATAGTTTGTGGAGAAAGTGGATT TACATCGACGAAAGTTCCACTTGGtttctttttcatactcaaCAACAGTA GCTTGCCAATACACATCCAATTACTCTGACGACGTAGGTATGGTGGCTAA AACATTCGAAATCTGTCATTCTAcaaggcttctgctcatcctttGTCGAA TAGAGTTTCTAACATAGGAAGTATGTTGTATAAAgctctgcgattcagac tatcaTTCCACTGGATTTTCAGATAAAGAATTTTGTgtataatttatttt cattattcaaattgatttttacaatccttttctttttcttcagctGTAAA ATATACCAATAGGTCAGTGAGACAAGGCTGCTCTATATATAGACTCGGGA CTCATGATTCTCTCGCGTAATGATTGTCTCTTTTTTCCTCACTCCAGCTT CTTTGGTATTATGTGCACCACCGCACATCTTGAATAAAGTTCAACCAGAA GACATGATATTTGGCTGCAATAAGGACTATCTGTCATATCTTGATCATCA AGCTAATGGGAAGTTGACTCATCCTTCCCCCTTCATTATCCGCGCTAAAA TCgactttgaaaacaaaaaggCTACTGGCTATATTTCAGGTTGGTAATGT TCATTCATTATAACTGGCCTATCTTgctcttaaaggttttgtttttaaat aattgtgatatcgtttgcttactcatctattttaattcacaagctttttg gacctaccccggtggaggtcctataaattaacccgtgttcgttagttagt tagttcgttagttaccaacttttctcgagattggctcattcaatttttct gNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNaacggttttccttcattttttcaacttatact cgacagattttcatgattttttgcacaatgatgtaaaatggcaatgccca aaatgtgacagagcccaattttcgtaaaagaaatttttccggccgctaga accggaaatgtcccgaaaaaagcggtttttttgagattttctcgagattt tcgcattagttttttgcgattttttgcacatagatgcacattagtactgc cgaaaaggtgtcgaaaaccgtttgtcgaaaaattttttttgtgccggaaa tcgtcgtttttttcacatttccgtcacattttttcaacttatttaattgt ttctttacagaaaaatgttctttatgatgatgcccaaaacttNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaaac cggcgtaaaacggttttccttcattttttcaacttatactcgacagattt tcatgattttttgcacaatgatgtaaaatggcaatgcccaaaatatgaCT CCTCAATCTGtgatgaaataatgaaaaatgaaaactaaatgtttttttta cttcagttttaattttctctgaatgattgattaaagtgtcgatattattt ttctttcaccgttaaacatcgatgcgtttctNNTTCGATTgccacggatg tggagcaaaatcggccagaaagaggaaaaaacattttttgcttatatcag cataatataacaaaaggcagacactgtcctgatatgaaatatgtgtctga tatccTTTATCCCTTAGTTGCCAGAGGACAGATGTCTTTTGCATTCTCCA AAGACTTATTGAATTCAATCAAAACCAAATGCTTGATGGTATGGGGTGAT CAAGACAAAGTAAGCCTTTCAAAAAGCTTTTCACATTTTCCCCCAGGAAT TGCTTTTCATTCAGGACCGAACGTCTTAGGATCAACCCTAGGTTTCCTTA TTTAAATTTGTTAGTTTCGTGAAAGCAGGGCGCAGACAAATAAATCTACA AATAAATCTTGAAAACGAATATTATTCAATAATCTTAAGAAAAACAGAGA GATTTCGTTTTAAATTCTTGTTGACTCAGTGGAACTTAGgcaatttaatt tttcagatttctCAGTATTGTATTTTaaggtaaaaaaaatatatcagaTT TTGGAAATTCATTGAGGTGTCTCTggagttttgaattttttaaaagtctt CCTCAAAAGtcgagttttcaaaaatcttgaatcTTTTAGATTATTCTGCA TGGAAATATCTTTCTAACGGCATTTAGCTTTTTGAGATTACATAGATACT TGCTGAGAAATTGTTAAAGGTAAAGTGTTCACATtgttttgagacagact ttaagaaGATGCTGCTctagatttcaaaattatttcagtCAACTCACCTC AATGAAAAGAATACGTAAGGAGAAATTACGCCTTTCTCTAGTCCAAGAGT CTGGGAAAATGATTCATGTCTGCATGTCTGATTATATTCATATTCCTATA TGTTACTCCTTTCTCTTCCTGACAGATATGCTTAACGAAAGGCCTGGATC ActttaaagaacattttgatGGATGCGAAAGTGTGCTTGTAGCTGATTGT GGACATTTACTCTTCCAAACGAACGTCAACGAAGTATCCTCTGCAATCAT TGCATGGGTGACGAAACAACAGAAAGAACACTCTATTCCTCATTCTCAAG GCTTAAAACCTTCTATGCGTTAGACAGCACAAATTAGTTGATTAGTATTT TATTGAAATTatattactctcgggtacctaacaN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055774TCONS_00055774Clytia hemisphaericatranscript
TCONS_00055775TCONS_00055775Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055774-proteinTCONS_00055774-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_259supercontigscaffold_259:9624..14157 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.6 21.34 15.06 13.52 29.88 24.99 23.13 20.79 14.33 18.13 15.22 13.24 8.84 9.65 15.93 16.03 13.75 13.88 6.37 5.29 8.54 7.1 35.33 28.03 8.94 8.08 8.78 7.34 22.53 25.44