XLOC_035185 (gene) - C. hemisphaerica

Overview
NameXLOC_035185
Unique NameXLOC_035185
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_264:65578..70693+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035185 ID=XLOC_035185|Name=XLOC_035185|organism=Clytia hemisphaerica|type=gene|length=5116bp|location=Sequence derived from alignment at scaffold_264:65578..70693+ (Clytia hemisphaerica)
AGCTATTGTGGACCAAAAAAGTGATAGCGAGCAAAGTGATAGCGAGCAAA GTGATAGCGAGCAGTCATGTTCAAAAGACGATACGGACGATACAGACACA GATGCAGATACAGATATAGATCTCTCTGAGCCTTTTTCagaagatgaaga tgatgagCAAGGTTTGTTTGGACTTCAGACTTAGAAAAATTTCACAGTCT AGCAGGGCAAAAGGTCATTTACCACTTAAAGGGAACAGTTTTTTTctgcg ggaactaaatttttacggatttccaaattacaaaaggaatttctGCTGTT TGTGTGAATTATATACCctcaatttttctcatttttaaaaaatctgttCT TCTCAGAAAATATGGATATTGACGAAACTCTACTCAATTCACCTGATTTG AGGGATGATGATGAACTTTCTTCAGATGATTCGTTGCCATCTGAGATAAG TGACCAAAGCTTGTCAGACGAAGATGTTCCAGTATCTGACGATCTCCATC ATATATTCGAGATGCTTAACCTCGACTGTGAATATGAGGATTGGTTAGAA GAAACTTACAAAGATGGATTTCTCACGTATGACGGTTCGTATTCTTTTTT CCTCGGGTACTTAATAAACGGAGGTCTGGAATAAGCGGGGCggataaaaa aatcttaaactTTCGGCAAAAGGCAATCTCGAAAAATTCCACGGCGGCGA ATCTTTTTCTTGGGGTTAAAGGTTTTGTAGCATGTCCCAGACGGACACAG ACACGTCCCTGCACAGAGTGATGAAAGAATGTCGAGAGAAATTTTCTGGG GTGTAATTCTCAATActaaataattctttttataGAGCCGTCATGTATCT TTTTACCTGTAGAAGATTCCGTGCTCAAACAACCAGTTTATCCGGGCGCT GATTTCACGCTGATGGACGTATTAGCAAATGAACTTATGTGGTTTGCATC TACCCCGTCGCTGAGTAAAAACGCACTTCAAAAACAGTTAAAGCTTAAAG CAAAAACCTATCCGAAGGGAAATACCTATCCTGATACACTCCACAAGGTC TTTGCCCTTGTCGGTCCTTACATGATACCACTAAGGCGGATTGAACTTTG CGTAAATGACTGCGTTGCGTTCGAACGCCAATACATATCTTTAAAGTCGT GTCCTGCCTGTGGTCAAAGTCGGTATTCGTCCAATAATTCAGCAAGACGA GTTTTTTTCTACATGTCAATGAAGGATCGCATTAGAAGACTTTTTGCAAA TTATGAAACTTCCAAACTTCTACAAAGTCACGCAGAAGTAAAGtacgttt ttttattaatttttaaatatttccttttaggggaaatatttgttaaaaca ggctttttttcttcttctccttcttcaggTTTCActgctttttgaaattt ggtgaGTTTTGTACGCTCCTGCattcgatgaaatttgaatcccacttgaa aattgaattagagagcgtaaAATATCAACAGACTTTTTGCATAGTCTAGG GATTCGTAATTTTTCAGCTGAGAAGAGGGTTGACGAAATGCCAATGAATA TAAAAAATCTAAGAACATAAGAACATAGATTTGTCTTACTAGATTGCAAA ATGTTATTCACGATGTTCACGAAACAAAAAGATGGGTACCGAACACAGAA AACCCGAGAAAAGTCAACCTGATTTTGAATACGGATGGTGTAAACCCGTA CAGCATCAGATGCAATTATTCAATGTGGCCAGTTATTTTGGCTATCGAAA ACCTTCCGAGGGCTGTCCGGTTTGATCGTAGTAATCTCTTACTCGGTGGC ATAATTCCTGCATGGAATGACGGGAAAGAAACGCCGAATATCAATATATA TTCACAGATATTGATCAATGATATTGAGGACTGTCAAGATGCCTTAACCT ACGATGCATACAGGTAAGGTATTTTTTTTTCATGAAATCAGATTATGTCA ATTAGCTGCGTTCTTTGCGGCTCTGGAGGACCCCCGTCTTTTACGGAATG TAATCTAAAATGTCTTTTAAACGCTTATTTCGGCCGAATTTAGTGCTTTG GCCTCTTAGTTCAGCTAAAAAAGGTCGAATCCTTTGCATCGGAATGAGGT CTAGGACCGCCATCGGGAGTCAGCCCAGTGGGGAGGGGATCAAAATATGC TGAATTCCCGCTGAGCTAAGGTTCCAGTTACAGCCAGAGACCAAGATTTG CATTTCACTGCTTTTCAGAGGTGATTGGTTCCATTTAGAAGTATCGATAG TAAAATATGTACTCGATTACCCTGGCATCAACAAATTATTTCACTTATCT GGATCGGGCGCTTATTCTGGTTGCACATGGTGCGACATCAGAGGTTAATA TATTATGATCATTTTGTTGTTTTCATCGTTTCAATAGTTTCGTAGAAACT ATTAAAAAGGCATTTTTTATTAAATGAAAGTCTGAAGTCGCTCTTTTTGC ACTTGCTAGTTGTTAGTTGTTTTATTCTTTTCAAGGTTTATACCTGAAAA ACTCGAGAAAGATGGTATACATTGGGTATCGGAATTACTTGCCAGCTGAC CATCCATTAAGAAATGACGCAGGTTAATAATccattcatttttttcactt tttatactGTAGGTAAATTTTCCTTGGGTAGCTAGTTTCGTGAATTGAGA TTTTGGctgaaaatataataaaactttcgcgaattcaaaaaatttaactt ttttaaaacaaaaactcgCTAAACACGAAAAGAATTAACAATCAGAGCAA AAACGGGCGTGTATGTAAATACTTAATCCCTCGCGTTGTCGACCGTATAA CCCCCTTTTAATTTTAGTATTCCGTTATAAATGCGAAGAATGTCCGAAAT GCTACTCTACAATGGACTACAAGAAATTCGAAGACGAGTACAATGAAGGA AATGATAAAGAGAGGGTAAAGCTTACCAAAAGGACCGGATATCATGGGCC AACTCCATTTAATCAAATGCCAGTAAGAGAAAATAACATCGATTTGATTA TAATTATTTTACCTTACTTCTACTGTTCAAAGTGGGAGTAGtaatttttc tacttttcaaCTGTTataataaatattcttatacaaattgtttccacact aTTAGGGGTTCGATTTTGTCAAACAGATCACGCCGGATCCGATGCACACT CTTACCAACATCGTTAAGAANGGGTTCGATTTTGTCAAACAGATCACGCC GGATCCGATGCACACTCTTACCAACATCGTTAAGAAAATTGTAAGCTTTC TAGGGCAGAGAAAAGGAGACATCGAAAAGTTCTTGAAGGATGACAATCTG CATAAAAGTAAGTtatgtttttgcatttttatctACCCGCGATCTCTTAG ATCTTCTGTCGTAGACCGTTTCTTTAATCAAAGATACCAAAAGACCTGTG AAATACGCACTTCTGTATACAGTACATAGTAAAACATAATTCAAACTCAT CTTGTAGATTTAACCGGAGAAGAACGCTTTCAACTTACCTCTGAAGAAAT CAAAATTGCCGATGAAAAAGTTTCCCTTCTGGCAGTAAGTTCATTTCTTT TCCGCGAGGCCATGACAATGACAATGTAGGGACGAAGTAAAGGGGCCAGA TTACCCAATTAGAATCGAAATTCTCTCTTTTATCTGTATGTAAACCTTTT CCCTAAGAAACGTTTTACCTCCTTTTTTCAGAGAGCAAAGAAATTACGGG TGAATTCTATATTCAAGAAAGAAAAACCACTTTTGAAATCGCATGACTGG TACACGGTAAGAAATTTTTTTGAGGGTCCTTACTTTAGCAGAATTTCTTT TCAATGTAATAGCTGTAGTCTGTATCTCCGTCTTTCTGTGAATCGTCTCT TTCGTTTTCGCTCTCAACTAACCCGATAAAAGTATAGTCCCGAGTATCCC GGCTAGTTTTTTTTTAATATTTTGAAAAAGAGTACTACCCTTGCCGACCG ACGGGGGTGCTCCGCTGAAGTTCGAAAAATGGACCCTACGTGGGACTCGA CTTTTCAAAAATGAGGAATGTTTTTTTATATTTTCAGCTTGTGAAGGAAG GAATTATCCAAGACGCTTTGTTTGGTCTACTACCAGAAACTCGTTAACGC TGCAAAGATTTTTGGAAGTCTTGTGGAAATTATGAGTGAAAAGATTGACC TCAATGAATTGCCTAAGCTGAAACTAAGATTTTACGAAGCCATGGCCTAT CTTGAAAGAGATTTTCCACTGGCTTTAATGGTATTTTAGTACATTTGTAT TGCTTTTAAAATTGTTTGAGATAAGGGTTTTAGACGGTTCAGTCTCTCGT CGTCGATTTTTAAGGATTCAAGAACTGACAGCGGCACGTACCCTCTCCCA TCTTGTTTACTTATTCGTTGGTGGTATCCCACGGTTTGAATGTATCCAAA TCAAATGTATCTATCCATACTCCAATGTGATCAAATTGAATTTCACAAGA ATAAATCTAGGATTTAGATTAGAGCTATGTTAAGAAGTACTGTGGATTAA TTTTTTTTATTTTCATTTTCATTCTTTTTAATAAAAGGTGATATCTTTTC ATCTGCTGGTGCACATCGTCGAAGATTTACACAATGGACCCATTCACACA AAGTGGATGTATGCCTTTGAAAGGTATAACTCGTATATTACAAGACGTGT AATGAGCAGATCGAATCCTGAGGCGTGTGTTATGAGAACCCACAGAGTAA GTTATACAGCCTATTTAACTCACAGACAATTATTCCCCTTAACAGTTATT CGATTTTTTTCTATTCCCAACTGGTTAATTTGGGAGGAAGTAAAAGAAAT ACCCAACCAAAGTAGCTAACAAAGCATCTGTGATGATTTATTTCATTTGA ATTATGAAAAATGCTTAATCTCAAATGTTGATAAAACGCTTTTATATTCA TACCACTTTACCAATAGGTATACGATTGGATTTTTTATTTCAAAAATATC GGACAGTTACAGACAATATACGAAGAAGACGAAGATATGACTGGCAAAGA TTGATATTTATCATATTTTTTATTTCTCGCCAATTCAAAAATTATAACAT TGTTCAATATTATATTATTTTCTTACGCCCTCAGAATATATTACAACCAT ATGTCAAAGATAATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055871TCONS_00055871Clytia hemisphaericatranscript
TCONS_00055872TCONS_00055872Clytia hemisphaericatranscript
TCONS_00055873TCONS_00055873Clytia hemisphaericatranscript
TCONS_00055874TCONS_00055874Clytia hemisphaericatranscript
TCONS_00055875TCONS_00055875Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055874-proteinTCONS_00055874-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_264supercontigscaffold_264:65578..70693 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.18 tpm) - - (3.35 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.63 0.84 0.18 0.36 1.5 1.07 1.72 1.52 0.66 0.94 0.49 0.96 0.61 0.99 2.02 3.06 2.12 3.35 1.94 1.71 1.84 1.91 0.99 1.31 0.21 0.18 1.31 1.62 1.07 1.37