XLOC_035218 (gene) - C. hemisphaerica

Overview
NameXLOC_035218
Unique NameXLOC_035218
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:311507..322353+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035218 ID=XLOC_035218|Name=XLOC_035218|organism=Clytia hemisphaerica|type=gene|length=10847bp|location=Sequence derived from alignment at scaffold_266:311507..322353+ (Clytia hemisphaerica)
AAATGCACGAGGAAAAAAATATCCCATGAGACGAAACCAACCTTCAAGGC ATCTGGTAGGTCATGATTTTAAAACAGTTTGCTTCTGTTAAACTCTATTT TATCagcgattaatttttttaaaggctcTTTTTTAACCTTTCTATTTATT CTTGAAATAACATCCTTACTTATCATATTTCTCTTATTATACCTACCGCT GCCCCTGCCCTGGCTGGGTGGCCGCACAAGTTTCGAAAAGTTTCCAGAGA AAGTGTTTATTCAAGATGTGATGATACTCACACTCACCATACTCACGGTA TATTATACCTAGGCCAAACCAGAGGCTGGGGAGCTCAAATTTATTGATTC TGATGAGTAGTGCCaatattcaaataaataaactaGTATATCAGCTAGCA AAAGGCAAGTATatcagactcaaaatttcagaaaaaaaaagttacacctc aacatacaaagtttagAGCCTGGTGCAACTAAAACAGTGAACAGTATGGT ACAGTTTgtgaatgacacagtctgtgtctgcgagtgaacccttgttgacg cTGGTTGACAcgttaacctgagatcagattgtggttgttttctgccccac gctgaagctctaaagggatgggtgaaaacatacaatctgacgaatatgca atctcgaaatcgtaaggactgcgttcgtctaaaaggactaggaatgacaa caaagttgcgtgattgtgtttatgaatagggcgctgtatcagtttttgac gttctggcgcacaacaagattctttttttgcaatgtcagcttttccataa attatgcgcatGCATCGAAAACTATAGAAAATTCTGCTACTGGGTGCGTA cggaccaattagagacactcaaATATGCAACGCAAGGACAATCCCTGCAG AGGAGTTAGTTGGTCCAGATTGTAAACCAGAAACATGATcttaaaaaaac tagacggtgaaatagtttactgtctggatatccaggcaaGCAataggcgg caaatctctggctgattttttaaaagtatggggccatccacatagtacgt acgcactaaaatgttgaaaattgagtAGCCCCTCCCCCTGTAGGCAAGTG TACGCAAATGACTAATTTCGAATTCTAATCGTTTGGTTcagacctttatt tcatacatgaaattcaatgtttattaagaaactttttccttTCCTTAATA AGAAGCATAAAAGTTGacataaaagcaagcaaaaaagggctatgaaaatt tttttctctgcgtacatacattttcctttgacccctcccctccccctgta cgcaagcatatgcttttgagaagatccccCTCCCCCCTTAGNttttcctt tgacccctcccctccccctgtacgcaagcatatgcttttgagaagatccc cctccccccttagcagtcaggacctctttggtcttttttaacattagttc ggatagaataaaaacatacctgatcaacaaaaccaaaccttctgtcttgc gtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTGTTCCAAACCCAAATCCCACCCCCGAAAACAGGCATTTCCC ACCCCGAAAATGCCCTGTTCCCAGGCCtgggtttttaacattttttcctt ttaaaagggctatgaaaatttttttctctgcgtacatacattttcctttg acccctcccctccccctgtacgcaagcatatgcttttgagaagattcccc tccccccttagtgcgtacatactatgtggacggccctaTGCACGCATGCG CAGTTAGTTTAAACATGATTAGCACAGTGAGCGTTATCGTAATTATATTG CAgatattgaattgaattgaatatattttcattgcaacgcagcaggataa ccccttacaaaaaaaattagattactctaatacaatggggaacctagaag aaactgaaaaattgttacagacctaaagaaaaataaaccagctgcgctgg aaggtcagcctaaattgcttaatatgattagaaagatatgttgttaaaaa ttgatatgatttacTAAGACGAGAGTAANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNGATATGATTTACTAAGACGAgagtaaaaaaatca tcaaatttacgtTTGTACACAATATGGATTAACGAAAATATGCCATGTTA CAATCTGTATGACAGAATGATTATTTGTCTCTTAATTAGGATAGATATTT AGATATACagatgaacagcaacaaaagactacatcaacaacagattcaag aaaataaaaatccttgcAAGGAAGTTGGAAGTTAAATGCAAGTacttatc aaaaatcacaaaaaatttatacacttattattttttactaagCTTAGACT TACAATTATATTTAAGCTCAAgctggacaaaaaatcaaaaaagtttcaaa aacaaagatgctgtaaatcagtaaaagttaaaatGGTGTCATTCTTATTC ATCTTAACTGCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCAAGTtcgagaaaacattatttttgtg aataatcagataattaagctgtgaactgtaatatatatacactccatcaa attccagcaattgttggtggttattagtcagccccggtgactcttcaaat cgtttcgacgatttttttcccgctggtcgtcgtcgtcgtcgttaagactt tcatttttaattccgatttcggattattttcgggaaacaggatttcggga ttatttagcgcgcgaaaataattttttcttagcaaGATGAAataagaaaa gataaaaaacacataacataaaaagaagccttataattaataataagaaa aaaagaagagaaaaaaaattattttttgcgtcATATCCAATAGTTAATAA AAGATGctttgcattgtaaataaagagAGCTAATTATAGAGAAAGCATAG ATGGAGAAAGTGAGtatatatcaaagaaatttttttccttcgaATAATGT TGAAAGTTATATACTACTTGTAGACTATTTCTTCTATCTGGGTCttttat tacacgttttttttataaggaataacacgttataaggaactcgaggctga aaatggtccaaaaaataaggaattgttaaggaactgctcaggctgagaat aagaaaacaagttttaaggaacagtaacagatggttatccaaacttagca gctaggtaaataaggaactcaataaggaactttgaggctgaaattctctg taaaaataaggaactcaaggctcagagcaaagttaaggttccttataaaa aaacaaacgtgtattCTCATGGAAAGAGTATAACAACAACGGAATAAATC TTTTTCACCGACTTCTGCTTTGGATACGGATTCCACTATGCACTGCTCTG TTTTCTTCTGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTTTAACAAAGCCAGAT TTCTTATCTGTACTTCCTATTAATCATTCTAAGCCTTCTAAGCATtttgg gctgactttccagcgcagctggtttattctatattcaagtccaaaatgaa aaactatgttttcatgctacaaaaTAATGAGGTCTAGCATAGGTAAAAGA ATGACtcacaattcaggaaaaaacttgagcaaataagttaaaatcttcat actttaaagaaaaaaacatcctAATAATCTAACTCCAGTGTTGTATCTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACA GATCGGGAGACCAAACTTAACCCGATcggataaaaactttagaaatcgga ataaaaaaaccaaactcTTAAGCGCCGGCTGGAAaaaagggatttgaagg gtcatcggggctgaccaaaaaatgaataaacgattatcataatattaata gtaacaacaataataatgaatataagaaatatttttacttttattttatg acaatttctttgagtagttttatttgaaaagttcttcctgttacaccACC CACCCCATCCCACCCCGGGAAAACACACTAGCTTCGCGCACTCACATTCA CACagaaacacacacacacaaagattattcctcttcagctttgtatttgt ctaatagaattttgtagctaaagattttagcTCGTTAGTATCaaggttgt gaaaatcagtgtcaggatgatttattagtaactcattccattgttttgac aAAAGACAAGACAAGAGAAAGAGTttaagtccaaaatttgtggttttgac cgttgaaagttttagtagtttaatagctttgcccctggtgccagttttgt gatcaatttcatcaaaattaagtgtCGATAGGACATCAGACGGAAAATTG CCTTGgaggtatttttgaataaataagatcaaagattttgagtaGTTTAA GCTCAGCAAACAGGGGAGTGGCAGAAGTTCTTAGTGCAGTGTTTTGAAGA GTAAGAATTCTATCTGTGACAGTATTGTCACACAGTCCCCAGAGTTTACT AGCATAGTGAACacaagaggcaaaaattgcatgataaatgtttagaagga TGTGAATTGGAACATATTGACGAAGTTTGGATATTGCCCCATCTGCCCTT CTCAATTTAGCAGCAAGCAGAAAGAAGTATGAACCTTCCAGTTTAGATGA TTGTCAAGGTGAACACCCAAATACTTCACATTCTTACTTGGTGATAGGAT TTTCCCGCAAAGCTTAATTCTTGGAATACATTCCATCTGTCTCTAAGGGG aacgaaaaataacaaactcagTTTTGCTAGCATTCAAGGAAATTTTGTTG ACATTAAGCCAACTGACTAAGGCTCTGAGATCAGAGATATCTTGCTCCAG AGCACCGGAAGTGCTCCGGAATCTTCCAGTGTTCTAGAGCACAAAAATGG CACTTTTTGCTCCGGACGTCTCCAGAGCACCGGAAGGGTCCTACAGGGGT TCGCTTATTaccagttagggttagggttggagcttgagagtcacaatata aggccaaaggccttcttaggggcatttgTACCCTGAGACTTAACttgcta taagtatttgtgaatgacagctgTTTGTCATGTCTCCTTGGCGCAAGTGG TcaggcattgggtttgtaaaccaaggttgcttgcatttggtggtgtGAGC TGGGGTCGGAGACCTATTTCACCGATACGGGcgaatttcagaaaaatact tcaAGAGTCAGAAAATCGGGATaaaagataggaaagtagaaaataggggg gaAATAggagaggatgcatcctggtggatgatatcttTTGCCaacctcta taaggagcacaaATCCATTAGCGAATGCCAGCAGTCTATATGATGGCATC ATTAGGGGTGCTCCTagtgaaaaatgttttgattgtgATTATAAACTTAC TCTTCATCCCTTTTTAATAAGATGGTAAATCTAAAAAATAGGAATAAGAA TCCATTTTTTCCAGACCTACTCCCCTTTTCCAAACCTACTTCTTTTGCCC TTTAATAAAATTGAgattaaaactaaaatattAGATTTTAGCCCACTCTT GTTTTGGCACTTCAACTCATCTCTAACTTATGCCTAAAAGTTTTCAGGGA CAGACCAACTCAACTAACATTTAAATTTTGGGTGGTTTTAGATGGTGCTT AGACTTTGTTATTTTGTAGGACCTGGAAACCTTTGTTGCCTGTGCAATGT TTGATTAATAAAAGTTTTATTCTTTCAATTGTGACCACTGGCCCGTTACT TTTCTTTAACCATTGATAAGTTTTGAAGCTAGTTTATCTgtgatcaaatt taatttttttctcatttagaTTTAGAGTTTTTCAAAGATGGCTAGCAAAA CAATTGAAACCAGTGAAGCGGCAAGTTGcgataaagaaaatttaaatatt ttatcacGACCCACTAGAACAAGGAAGCCAGTACTCACAGAAATTCTAAG CTCAAGTGACATCGAACTTAGTCCTCCCTTAAACTATGATGCATTAGAGG AGAATGATGAATATGATCCCAAAAAAAATGAATCTGACGATGATTCCGAT TTGCCTTCTACACCTCTCACAAAGAAAATAACTAAACCAACGAGGGGACG TGGTAGAGGTCGTGGTACAGCATCAACTCGTGGACGTGGGACATCATTGA CTTCTGGGCGGGGAGCAGCAAAAGGAAGTGGAACACCAAAAGTAGGACGT GGTAGTCGCAAAAGTNGACTTCTGGGCGGGGAACAGCAAAAGGAAGTGGA ACACCAAAAGTAGGACGTGGTAGTCGCAAAAGTGGAGAATTTTCTACAAA AGCATCTCAAAAATtattctacaaaaagttgagtGGGCTAGACAACAAAA CCTTTGTTAGTTTGATCAAAGATCTCATAGAAAGTGAGCAAGTCTCAATG ACTACAGTTAACAATAAAATAAACTCCAACATTGATATTGATTCAATTAT GAAGGGCTTAGAGAAAGCCAAGAAGGCTATTTTCAAAGCCATGCCAAACC CATGGAGATTTGGAGGAGGAAGTGCTACTTTTCAAAGAAATGATTTTGCA CGTAAGCGATGTACCTCTTCCCAAAGTGCATTCAAAACTTTATTCAGAAA TAACACAACCAATTTCAAAGGGTTGGATAATGGTGACCTCATTATTGATT TTGTCTTGAAAGCTTTCCCTGTTGTTTCTGAGCTCCCACAATGGATTGGT TGTTTTAAACCTTTAAGCTTTCTGAATGATTGTCTGGATATGTTAGGTGG TCTACTTATGCAAGCTATTCCAAAGCTCTCAAATGAAAGACTGCAAGATA TTGTTGATGAAGTTACAcgtttctcatcttttacaggTGAAATGGGTGTC TCtgttgaaaatgaaaagatgGGAGAGGCTTTAGCTTTACTTAAGTCGAA AATTTGATGCAAAAGACTTACGAAAATGTGTGTATGTATATTATGTACAA TTTGTGTTTCATTTCAAAACAGATATATTTGATTCATTATTAggctttta aacatttttattatatttttaaatgTAGTAATCATATGTGATATATATTC CATTCTATATTTActcattttcatcttttacAGGTGAAATGTCATTTAAA TTGGCATTATTAGATTCTAAGATTTGATCGTAaatttaagtttaaaaaaa catgtatattttTTGTGTATAATATTTCAAGAtatatttttaggttttca aacttttcaaagatttttaaatgtaaatagtTCACAAGGTGCCTAATTTT ATCATTATGTGAGTTAGGTATTTTAGGTCCTCATATATTTATGATAGGAG TATTTTAGTTTTATTTCAACGTCActattgtttttttcaaaaaagattta taaattagGATTTTTGTTTTCTCTCGCAAAGAAACTCAATTTAGCACTGT AAATGCACATTTATCAGTAGGACATGTCGTTgccaaaagtcaattttttc gaaaattgagtcATATAAagtcatatttagaattttataaattcttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055933TCONS_00055933Clytia hemisphaericatranscript
TCONS_00055934TCONS_00055934Clytia hemisphaericatranscript
TCONS_00055935TCONS_00055935Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055933-proteinTCONS_00055933-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:311507..322353 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.58 2.5 0.71 0.9 3.67 2.95 8.38 7.37 5.94 4.89 3.14 3.51 2.6 2.49 2.66 2.27 5.99 3.97 0.89 0.36 4.64 4.24 7.12 5.99 20.22 24.54 0.95 0.95 4.04 4.47