XLOC_035227 (gene) - C. hemisphaerica

Overview
NameXLOC_035227
Unique NameXLOC_035227
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:646747..658015+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035227 ID=XLOC_035227|Name=XLOC_035227|organism=Clytia hemisphaerica|type=gene|length=11269bp|location=Sequence derived from alignment at scaffold_266:646747..658015+ (Clytia hemisphaerica)
ttggtaaaatttgtttcGTTTCTAGATACGACAGTGAAGGTAAGTTACTG AAGAATATCCATTGTAGGTTTTTGGATGAGAGTTTTGTAGAATATTTAGC TAAGTAAGTGACTTCTTTCCATTTCAATATGAAAGGTTGTATTTGTAGTT TTTTTTAGATGAAAGTAGATTTAAAagtagattttcttttttttttgaac gtttgaaaaatttgttgaaaacttTGAGATGATTTTTATGTTATTAGTTC AGAGACAGAGggagtaccttatcggccaaaacttagtcggccctaagtga ctaaattttggcttgctGGCTAAAATTAGGGGATGACtataaatttgggc caaattaaattAAGGCCGACAAAGTTTTGGCTGATAAGATACTAGATTTG TGAGTTGACGGGTATGTCcgcgagccgaaaatcgaaaatcgacctttAGA GGGAAGAAAAATCGACATTTTTGGGACCCAAGATGagagtagactggagt cgtttataatgcgtgtaatactaataataataataatacgggatttagtt tgtataaacgactggaagaatccggtgttccagccttatagatacagggg ctagctacgcagaaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggc aattctttgttaaaagtgttaaagaatctaaaacataacttttatgtttc agatactaaaatcaattttctgactatggtcagagcccttaagcaacaac aaactgtCAAATAAAATCtactcaaatgaaacatttttaacacacaaatc cacacacattttattttcaagaattttttttgagcaggaaaacattttaa ttgcgatattgacactttttttattgtttggagttagtgcacaaaggttt ctagacgactaaatttacttttttgctttatttctaatatgtctgaatta gtcgtctagcttgctagactactagctacgcagaaacttgcgtagcgaga aaacaatttatcaagcaacaacaaactcccaaaacgaaatcaactcaaat gaaatttttaatcaatacacaaatccacacatattttttttctcaagaat tattttgagcaggaaaaaattacaattgcaatattgacacttttcttttg tttcgagttagtgcacaaaggtttctagacgactaaaattgttccattca ttactttttgctttatttctactatgtataaattagtcgtctagcttgct agactaagaTGAGAGAGAAAAAATGCCGTTTTTGGGACACTTAGAGAAAC TTTTCTCGAAATTTGTGtcgattttcactcgatttttgtccaaatttcgg AAAATCACGACcttttgacttttgacttttgacttttgacttttgacctt gagttgagagaggaaatttcgattttcgtgaattttggaccctcacagag actcaatttgctttttcATGGTTTTTGTATCCCTTTGAGAGACTTCCGAG GATGTGAAAAAGCGGCCTTTTTAGCTCGAATaaacccggcacccattttg cctaggTACACCCTCCCCCGGGGCCCGGATACTTTTTCTCAGCTTCTGTT GAGCTAGTATTTGAAACATCATATGGCCAGATGAAATGTTCCCTGAAAGC ATGACCGATTTTGTGGTTTCAAATGAAGGTGATGACCAGGATGATTTTGA GGACGATTATTGGGCGattattgttttgatgaatCAGATGAAGATGGTGC GAACGATAGCAGCGACGAGAAAAATAATGAATAGAACTTATATTGACCAT AAAAACGTTTtacattagattttttttttttcaaacagttTTAAAATATA AACTCGTTTGTCTTGAACTTGAAactcaaatttgaaaatctaaaagTAAG ACCTTTCAGAACAAAAGGAATCAACCATCCTATAACCCCAAAGATAatta atttttatcaaaacccTTCAACACGTTTGTTGGTCTTTATAAGTTAAACT TTTCAAAAGCTTGAATAGTTGAACAAAAGCCTCCAAATTATCATGAGAAC AGTGTCCATCTAGTTAtggcaaaattttaaagaagCTCAAAATTTGagta ttctggtctgtaaagtatctCTCAGTACagactttttctttcaaattttt cagaaactaTTTCTAGTTATATATGACCTTGCCTAAAATGGCATTTATAC TCTCGTACTCTGTTTTTTGTGATGAAATCCCGCAGATTCGTTGTTCTTAT GTTAAGGTTCCTAAAAAATCCAAATAATTagatgatttcaaaaatttcta tggggaaaaaaaattggccatcttttcgaaaaatcataaaaaaaagcaaa aatttgaatattccggtctgtaaattatgACTGACTGagttaaaatttct gaaattttgcatGAATCATTTCTAGTTATATAGCTACATGTTTGCAAAGT TAAAAACAAATCGAATGAATAGTTTTTGAGATATGACGTATTTTCGTGAC CAACCCCAGGCTAGAAAAATCGTAAATTTTGTGCTACCGACCCCTGAAAG ACCCCCCGTAAACCTGAAAGCCACCGATTTAGCCCGTAAACCATCTGGTT TCATAAATACTATATATTAGAGCACCCAAAAATCAAATATGACACATTTT CTACCAAAAGGTGTCGCGACGGCGAGTCATTGCCTGGTCTAAAGGttaaa acttggtttttattacaattttaaagttttaatttttggggtcTGGAATA AGCTTTGCACAATGACTACAGCGAGGACCGTTAATACGTATTCTGATAAA TTGGCAAAGAACTCAGGGGATTGGGGTCAACTTCAGGGGTATATCAGCTT TATTTCTTTACCGCTCTTCTCTTGTattttggcttgaaacattCTTGTGT CCAAATGATAAGCATTTTATTCCTTTGAAAATTCTACTTTGGCAGAAGCT CACCACTGTGCATTATGGTCACTTTAGGACCCTTCTTTTATTTCTACCCC TGACATATTACGTAACATAGCTTTGCATAAGGTTCCACTTCCACTGTCTA AGATTCCACTAGTTATTATTaataagaaaaagtgaagcacAGCCCTGTGT CAGAcgttgggaccccagccccactggaaaatttagtaaaaattcatcaC TGGATATTTTAACAGAATTCCCATCccaattgggatttcaataggtgTTT TATCCCTACTGGGTTataaagttccaccggggctgtgaaacaggggtgat GGAACTAGTGCTAATGAAAGATCAAAGTCTACAATGTTATCCGAAATAAC CCTGACGCTCATAAAGATAAAAGATTAAAGACATTCAgttaaaatgttca aaatggCTTCTTAAAAGTTGCTGAGGTGATGTtagattattttgaaataa aagctCAGTTGTTGATCTCAGATTAATTACGTCTGAAAATTAATTTATTG ATGACCTTTCATTGAATTACGTTGATCTCAGATAACTACTGTCATCAAAC TGTCTACGTTGTCTGTTTACTTCTTGGAAATTTGCCATAGACTAGTGGTT AGAGATATTGTataatattgaaaatagttAAACGAATTAATTAGGGAGAA GGTGAATCATGTCTGCTGTTCTTGTCATTGCTAACGTTGTCTCTTTGAGC AGACTGTAACCCAAAAACGATAGTTGTTAGAACGGTTATCGAATTTGATT TTCGAAAGATCTAAATGTCATCGTAaattaagttttgaattttattttct ccATAGTTTGGTATACGATTTTGTCGGTGAAAATATTGAAGGGTCTTCAG GCTGTCTCCACAACGATTGTCTGCTGGCTTTCAAACCGTCACGTGATCAT TCTTCGAACCCAGTCTCCGTAATGTTCTCCTTGTGACGTAAAGGAAAATG TGTAAGTATAAAAATCttaatttaaaggttttctttttaaataattttgc taACTCATCAATTtagatttacaagctttttcgtaatgaattgacacaga tgtggagcaagctTGGTcaggaaaaggaaaagaaaaacaattgacCCTGT CTCAAACTCATTAAAGAGtgaattcttaacttttttctttattgccAGAG ATTAGATTTTACATTTGGCTTGAATCAAGATAAATTTGGAATTATTGTTC CGTCTTTTCCGTGAATCTTTTTCCATGAGATGAATGATACCCACATTGTA CTTGTATTGTTTCAAGCAGTTAGCACCCCCTGTCTCATCTTTGTTAGCAA TGAAGCAGCTAAATACCGATGGTATTCGGTGGGAGTGGAAAGGTGCCTGT TTCGGCGGCTGGattaaatgtttaatttcaatACATCTttatcacacccc tgtctcagaacttcggtggaaattttttcctcagtggggataatcttttt taataaaatctaaatggggatagaaattctattgttccaaagttGAAAAA TCTAGTAGGGTTgttttggagtgtaatttttaaacatggaattttcgAGG tgaggatgaaatcaaagtcaatttcccagtcgggctgaaattcaagggca TTTTCCAACAGTGAGCTGGGGTCCCGAAGGGTCTGCGACACAGGGGCGTT TTATCCAACCTTTAATTGtagaattttcaaatgtaatgACTACATCTCTT CCATGCCGTTTTTAATTACTCAACTCgtaatttgtactagtaatcgtatg gtttggagtgcaattaacgattaatcacgagtaacaaaggagaaaatagt aatttgcacgagtccgaaggacgagtgNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttgttacgagtgat taatcgttaattgcacgacaaaacatacgattccgaggtaatcgtcagta aataatcattagtaaatcatagttttttcagaaaaagggaacatttttga cattcgaattctttgttttcaattaaaagaagctattgtaacataaaatt tctttgttcttttttatattgaagaaaaaaatgtctttgttttttattat atagtaaaaaaaagtctctgacacaggacttgggagagaaaagNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccccccgccg aagagtgcaaaaagtggtaatagtgcaattaacgattaattgcactcctc taaaccaatcagattcgagtaattttgcacgacTGACGATTACATGAAGT AATTGGTTTCACATACAAAATACATACACACACATACATATTATGCGGGA CTAGAATATAATTTTTGTAGAATTATGATCTTCAATGTTAAGTTGCATTT CTTTAAATGAGAAACTACGGGTTCTCAACACAATATTGTAGCTATCATTT CTTGCATCTTTATCGTTCATAGATAAACAGAAGCGAGAGAAGTTTAAACG GCGAACGGTGGTAGATGAGATAAAAGCAATTCTTCAACAGTATCCTGACG ATGGCCAAATCTTTAAAGTAAGATATAAGTATTTAAAGAAAGTTCTAGGT ATCATAGTAATTATTCATAAAGAAAATTGTAGGTGTCATAGATTTTGGCC GTTTTATGGTTACACGAGAAAAAAGGACAACTAGATTATTGCAAACTTCC ATTGCTTTCAGGGAGCGTGTTAAAAGTTCACGAGTTTACATAAACCCGGG TAAATGCTTTAaccaaacaaaatttttgtttttattgtcacatgggtatt ttttttcagtcataGTAAAGGCTCATTAGGGGGTCATTAGATAATGCTCT GCCTTCCTCTAATCattgctacacgtttttttataaaaacatacagatgt tcttaactttgtgagttttaagcctaaaaatgttcttaacatgttcttat tttgaccattttgtgacaATTTTCCCAAGAagtagggtgtttttgagtcc acaaagccttaaaatgttcttgagaTTTTGGTCAGCGAAGCCCTATGTtt ttacatagtttgttcttataaaaaaacgtgtaatttatcaatcaatcatt CGTCCACAATAACTTCATAGGAGATCATACAGAATGCTGAGGACGCAAGA GCGAGCGAAATAGTCTTCGTTTTTGACAAGAACGTCGACCAAGATGCAGA TCTTCATTTCTCAGAAGAAAAGCTGCGCAGATATCAGGTAATTACTCTTT CTAAATAAGCCAtcgattaaaataaaaaaagaaaggaaatgAAATCATAT GAAAGCCATTATTGGTATAGTAAAGATTTCGGGATTACTACTAAGTTTGA GTGTTGATGTTttctttaatgatttttgtttTCAGACGTATTTTAGTTCC TCACTAATGGACGCTGGAGTATCAAGAATTTCTCATAAACATTGCTTATG TTTAGTTTTGCAAATGGGCTTCCTTGCAAATTCTTCTCCTTGCCGAGTCC TAAAGTGGCCTGTCttgaaatacacgctttttttataagaatggtgtttt tttcatttcatcatgaatattcttgactttttggcgaaaatcatccaaaa atattcttacggtattcttaggttaagatcgaaattggcaatctacaggt taaaatgcattaaaatggcattcttaggttcagttgctaaattccatgat ggtgatattcttaccatactcttaattttttggccattttcatcatggac attcttataaagtgtatttttattaaagtttttctttattgtattttttt ttagattccaTCTTTATATGCTTACAACAACGCGTCCTTTACACCAGCGG ATTGGGATGGTGTCATCTCATTAGGAATAAGTGGAAAGACCAAGCAAGCA TTGAAAGTTGGACGCTTTGGGCTTGGGTTTAAATCAGTTTTTCATTTGAC AGGTGAAGAAGTTTATTTCCCATTCACTCTtgcactctttttttttcttt tgtaaggACACTGAGACTTGATGAGCTTGAGCTTTTAAATATACTTCACT TATTTGTCACAAAGTAATAGATTGATGACaatttcgaaaaacaaacaaaa attgttttattacaagTTAACGACGagccaaatcaaataagagcttgcgA AAACTTCAAGTTGTCCCAAAGCTGGGAAAATTCATTACtctaattttgtt ttgaaaattgaatcaatgagacagggatgtagaACATAAGTTGTTTTCAC GGACATTTTTGAAGTATTATTCCTGTTATTTTGTCACACAGACTTGCCAT GCGTTGCCAGTGATTCTACATTCGCTTATCTCGATCCCATGAAAGAGACG TTTAAAGAAGAAGTcgaagttttggattttgatgaaCCAACCGACTCCGA TGCTGATTTCCACGATTtcaaatccttccaaagattgGGTGAAAAATTTT GGAGAAACGAGAATGGAGTTGAAGGTGAGATTCTATAGGAGAGATTACAA TTTACTgttgttattttgaaaaataagaattagATATTCCAGAGAGAAAG ATGTTACGCATTCAAAGTTAATAAGTACAAAAAAATCCTTTCCCCATGTT GATACGAAGTAATTGAGATCGTgtgaaaaaagatttcattaCGAGCCTTC TCTCAATTATCGTGTTGCTTTGAAGTTCATCTAGCAATGCTTTTGTTACC CGGACTGGtaacttggaaattttttcgtAGCCAAAGCTCTAATCAACGGG GatagaaaaaaaataccaaCCAAGATTATGTAGGGGTTCCATTGCTTTCA GCGTAccaataaaattagttttaaaattaaaattcgatttttgtgGACTG TTCATCAAGTGGGTATGGTCCCACTGACTCAGTGGCACAGATTCTTTATA ATGTgcggcctttttcaaatttacatttCATTAGGTACATTGTTCCGTTT GCCGCTTCGCTTGAAAGCTTCCAATCTTTCATCAGTGATCTATGACGAAG AGCGAATCAACGCATTACTTGAGAGATTCAAAGAAGAAGCACACACCACA ATGATCTTCCTCAAACACGTCAAAAGCATCAAAATCTACACTATTGAAAA TGGTTCGACAGTCATGAAGGAAGTTTACTCAGCTAAATTGACAGAGCATA GCCAAGAATATCAATCTCTCAAAGTTGATTTTGTGGAGCAAATCAACCGT TTGGTAGACGAGGAACAAGATTTTGCGACCATCAaacaattacgtcattt tcttGAAATCGAAGTGGAGAGTTTGgacgaagatgaagaagaagaagaac aaatttaCGAATACGCTGTTTGTGAAAGATATGGGTACGAAGGAACGAAT GAAGATTTCATCTCTCTGATGTATGATGAAGAATTATCGTATGTACCATT GGTTGCCATTGCTTACCCTATCAATCAAGACTTGGACGAAGGAGGTCACG TGTTTTGCACGCTACCGTTACCGCTTCATTGCCGAAAAATGACTGGCATG CCAGGTGAGTAAGAGTAGTAAGGGATGTTGAGAGGGGACGCTACTGCCAT GGACATAAAGACGGGGAACTGGATTCATGATTCCACAATTAGAAGCGAAA TATAAAAAGCCTTGTGATGTgcaaccaaatcaaaataaaacataacacat ttttttttttgaaacgatATTTCGGCCTCAAGTTGTGATGAATTAGAAAA TATACCACCTACTTACACTTAACtcgcagtgccgtaggaagcgtttccat attgggggggggggctgaagtttagtgacgcCGCGAGGGCCAAcaatggt ttggcccgaggggaaaaattttgaaaatttgagctctagattgcttgaaa atgcactcaattgtgacaattatgacaaattaaacaagaaaaactttgca ttttgcaaaataaccatttttgaaaaaattattgggggggcatagccccc cttgcccccccagttgctacggcactgactCGAAATAACAAAATGTCACA CGCCTCTCAATTTAATACAAATTAATTAACTCGAAGTCTCATTGCCGTTA GAGTCACAGAGACCTTTCCGTAACAActttatatcaatttttcaattttt tttcattttcttttagtTCATGTCAATGGGTTCTTCGCACTTGGCCAAGA TCGGAAAGATTTGAAATGGAAATCACTTTCTACCCAAGGAAGCAGCAACG ACAAAACTGTCAATTGGAATGTTTATCTACTAACAGAGCTAATTCCAATC GTCTACAGtgatttgtttgatttcttgaaaACACTCGAAATCGAGATTGA TGTTTTATACAAAGCATGGCCAGATCAAAACGAGATCGATTCAAAATGGC GTCCTATTCTCGACTTATTCCATGCTTTGATGAGAGAGAAAGATTTTATA TACGTTGGTTTCCAAGATACGTGGTATAAAACACAAAACGTTCGGTTTAT CAAGACAGATGAAATGACAGGGGATGAACTTTCAGCGGTTGAAGAATTGT TGGTTTCGACGAATATTCCGTTTGCTATTGCACCACAAGCGATCACTGAT CGTCTGCCGTGTCATTGGATCAATTCTTATGAAGTAAATCGTTTGATCAT TGGATATTCCATCTTTATAAGGtaattaatagaccttttcataaattacg tcacgaacatcacttgcctcgttttgaaattattgccatggtgattaact cccagcggattttactAAAACTACctcctattcataaaagaatcgtttaa tgtctcaagggacacaatcaccatggtaattgtttaaATGCGAGGCAagc gatgttcgtgacgtaatttatgaagaAGTGTTATTAAGGTAGTTAATGTT ATTAAGAGGTAATAAATTTGAGGATTTTCTAATTTCTCACTTTCCCAACA GAGGCAATAATGATATACATTCTTTCAAATGCGGATTATCGAGACCTACA GCCTTTTCTGCTGTGATAGGCAGGcatattacatccctgtctcagtggCC TGACGGAGATTGAGAACTAATCGGCGCTTAAATAAAGCCACCGACACAGA TAATCTTGACACAGTTTCTCCAAGGAACGAACAATTCAACTTTCacattt tcactttttatttgcAATAAAAAGCATGACATGTTATGGAGTTAAAAAAT CTTACAAATAAATTCTGacttagtcaaaattttttttttttcttttttct accGATGCTTCCATCACCAGGGCTAATTTGACCCTATCACCGATATCTCT GTGTTACATTGACCGCTAGAATGATTTCCAAGGCAGATTTAAAGGCTGTT GTAAATCGTaactttaaagattttgtaTGAGCTGCAACGCTGTAGTTGTC CTATGaatgaaattgttaaaaattgtTTAATTATATTTTACCATCTTATC ATAGGTTACCTATGGGAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055962TCONS_00055962Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055962-proteinTCONS_00055962-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:646747..658015 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.66 0.56 0.62 0.27 0.24 0.12 0.26 0.48 0.26 0.48 0.04 0.16 0.66 0.87 3.26 6.2 1.89 2.19 2.67 3.07 0.41 0.44 0.91 1.98 6.92 6.47 4.27 3.29 1.67 1.4