XLOC_035352 (gene) - C. hemisphaerica

Overview


Name	XLOC_035352
Unique Name	XLOC_035352
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_268:128730..142376+

gene from alignment at scaffold_268:128730..142376+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_035352 ID=XLOC_035352|Name=XLOC_035352|organism=Clytia hemisphaerica|type=gene|length=13647bp|location=Sequence derived from alignment at scaffold_268:128730..142376+ (Clytia hemisphaerica)
AAAAATGACGTACTTTAAAAAGTTGTTACAAAGTATGTCATTTTatctta
acaattttgtaaactaTGTCACAACCATGgagcgctgacttttagtttta
tgacttattctcactcgtttggtttctgtaataaaaacaaagtcaTTATT
GTGAACTTGAACATGCTTAAAATCGAGTTACTTCCACGGACTGATGTATA
TTACTAGGCGACCCCTTAGTCTaataaacaacattttttcacaggtctct
caaaaacaattcaaagaggtGACCTTGGTGAATATGGCCAACATTACATG
ATTGCTCCAATGACCAATGAAGAAGTTATTAACGTACAAACATGTTTCAC
TTTGAATGGAACTCAAGATGCGGTTGTTGAACCACAACAAGCACTTCCAG
ATACATCCAAGTTCATTGTAAGTCTGCATTTGAGCTTTTCCCCCTATATA
GTCTAATTGTAATGCTAGAGTTTAATTGATTGTGTTATTTTATTGCACTT
AGCATAAAAACTTCTTTTGGACTTTCCAtgtatttaaaatttctttattc
tttcttttaagaattatttttgtttagtttgaaCCGTTGGTCAGTGTCTT
TCTCTCAAAGTCTATCttatattaagcagatattgGACATTTTCATGTTA
AACATATAGTTTATCGTTCACTCAAAAGCAGAAAACATTCCCTCTTTTAT
TTTCTCCAGTCTCTTTTTATTAATAGGCCGTGGCCAGtggattgttattg
tttcaaaaataaagaaaaaattcaaaatttcggtgaataaacttttgata
tctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNagcttttctcaagattggctc
tttcattctttaagactttttgcacaaagatgcataactataaaccctcg
aatgtgacggagcccaattttcgaaaaaaaaactgttttggggcaaattt
gggccaaaaatacggctaaaaaacgggatcattaattttttctgattttt
ttgcatgaaagtagggtaccatcataggtaaaagatggctcaagcagatt
tttgccaaaaaaatttgttggctcaaaNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNagccaaattactcaattttttgatgagatagatgtcttttt
atgctcacgaagtcttgaatatgaaagaatatttcaagagcatgaaattt
aggtttctaaacgttttttttataagaaacaaacgactaattttaataaa
tcttcactatttgtgttctgaatgattgtttaacgttcacgctcacgtag
atatcaattatatatgtgttaaatgcataaccaggtaggtccataaaagt
atcacttgttagtCAGCCAACAGCTGATTATTCAAATAGGCTTTTTCCCC
ATCATCATCAGaccaaaagtgaaaaaaacatgTTACCCCGATATGCTCAT
TGCGTAAGCtgtgtttccccgatttctaaagtttatatccgatcgggtta
acttttagtgtacttttagcgtgtgttgtttttagaaaacataGATGTCG
TTTCAAGATGGCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtatgttggcgcatgcgcctcttttccca
tcttgcacccttattgaaaaattgaatgctggtacaaaagaaattttgct
tggcgtgaggcttgctgtacGGAAAAATACCTTCGACGCGAGATTTTGTG
GAATCCATACTGCACTGGCGTGTTTGGCTACAACAACAGCAGAAGGAGAC
CATCAAAAATATATTCTGTTCGCGCAGGCTGTTTGCGTCGGCCAACCAAT
CCAACCAACTTGGCAGACAAAAATGCTGGAGGAGTCAGATAATTGTCAGA
ATTTTTCATCAAGCGNTTAGAAATTTAATAaagatcaaaacatttttcac
aaagtttagaaatttaataaaaatcaaaacttttttcacaaagtTATGCG
CCTGCTAGGTTGCTTAGCctttatagaaatttttttatagGGGGCCAcaa
ttatacctttaaaatgCATTTCAGGGCGAGTAACACCATTTCCATAATTG
TTAGAATAGAGATACCCCGAAAATATTTGATTTGaccttagcaacctggt
tgcttataaaaaagaaaatgtgtaCATACATATCTTTAAAAGGTACCAAT
AAAGGCGGCAATATTACATAATTTTAAGATTGTACGCGTTGTGATCAAAA
TGATATCATAAGTGCTATCTACTTGTCCATTTACCATTTCGTAttgcatt
gttttgttttgcttggTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccaatttccgtaattccgtc
taaattttcgccaaattccgccactccgtccgaaaaaagggccgattccg
ctcctccgccaaacgtgaaaccccccccccaactAGGAGTTTTGAGTAAC
CTGGACAAACATTTTTTAGCAAAATGTGGTTTTTAGCtcttaaaattttc
caatttcggTTGATTCTTTATGCATCTAGTCCTTCCTTCCATCTCAGCTA
CTTAACTTCTTTACAAGCTATCCAACTAATAATCTAGCTATATTGGCTGA
ctttccagcctcggctggtttatttatatTTAAAGAGAACATGTCGGCTA
TTTAATGGGCACTTTTATTTTAAATCGTAAAAGatgtatgaaataaagaa
aaactaaaaaaaaaaaaaactccaatccaAGTCAAAGCAAAAACCAATGA
AAAGTATACTTTACGAATTCTTTTTCAGTCCTCGCTCCATCCTGAGGTAT
TTAGTAAAAATCGTTTCATTCATTTATTCAACAGCACAAAGGTATGAAGA
ACTGGGACAACCGAAATGTAGATGTCTGGGAACTAGTGGATACACACGGT
ATCAAAATCAACAGATATACCCTTTACGTTGATAGTCAAACATTGCATCC
AGTCTTCTACGAAATGTTGGGCTATAACTCGTTATTAGGATCTCACTTTG
ATGAATACAAACTATACTATACCATCTTTGCTGAAGATTTCCCCGTTGAT
GTGTTCAATATCCCGACAGGTAAGAAAGTGCAGCTCTGCATGATATATCC
TAACAACCGTAGATGGAGTTTAAAGAGCAGCAATACTTTATttaaattgc
ttcattttttaacctttctctATTGTTGGGTCTTATTGATGTTACCAAAA
TACCAAGAGTTACCCAAGAGTTATCAACTCAAAACATTGCACCCTTCTTA
TAATAAGAATCATTCATCAATTGATTCATttatcatttcaaaaaaaaaca
agatgacctttttttctttttgtacgaAAATTCTAGAGTGCAatattatt
attcaaaaattaaataaaaatgaacatAAGATGGTAAACGGAAAAAGTCA
CTATTTCATCTAGCGATACTTTGAACATCATATTTCTATGGGAATTTCTC
TTCAACGAGTGCAAATTCTGAAATGGATAAAGGATTGATTTGTCATCTTA
TTGGTAATGTTTTTCTTGAATAGTAGAGTATGGTAGAGTACCAAGATTTC
TTTGTCTTTAACATATCTTTGTTAAGAAGTCATTCAGTAGTAGGGCACTG
GCTATTGTTATTATCATACTTCGATTCCCACTCGATCTTGTTATTCACTT
GACTtatgaatataattttgttCAGTTTAACCCATGCCATATGTGTTAAG
TATATGATACTAGTAGAAGATATGCtttatttttaaatgtaaagGTGTGA
GATTATCTTGAAATGTGTTTTGATAGACAGTTTGTGAGGAGAAAGTACGC
CCTTTCACTAACTATTTATATATAACAAGCAGTGTCAGCAGAGTCAACGA
GTATCTGTAATGATTTCCCCAAGTTCACCATTGTTTTTCAAGATATCCAA
AATATCTGCTATTTGACATAAAGTTAAATCAGCTTGTATTAGAATGTATA
AAACAGATAATTCCTGTATTTGATGCCCTGTGTTAGATCGTGGCCGGGAA
AGCCTGCGTATGCATAAAAGTTTGTTCTTTCTAGTGGGTCATTTTGTAGT
ACTTGCTTGTGAAGTAACAAACCATCAACccttatttctactatgtactT
TCCCAATAATGGTGAATATAATTGGGTGATTAGAATCTTGTAATAAACGT
TTTTGACGATATCTAAAAGGAAATTTCCAGGTTGTTTGATCTTTAAACTT
GTGCTTCCTGATCCGCTGAGTgtgatgattttttgctcagtGTTTTCatc
acaaattttgaaagcatttGAATGTGTTAATATATCCGTTGTTTTCATGA
CATCGATGCTGAATATCCAATTTTTGtatacatttttgaatttttgcaat
GTTTGTTGGTTGGCCATAAATTCTAAAGACAATATAAAATAAAGTAGGAC
GAGGTAATTTTAATCACATTTCTCGAAAACGATTCAgaagatgttgaaaa
ttgttCAGTTGGACTTACCACTTGGGTTTTGATCGACATTATACTCTATG
CCAGTAATGGAACAAAAAGGACATTCTCCAAACGAGAACCTCACACCATT
GCCAAATATTTGATCATTATGCTCAATTCGGACGACTTCGTTACCATCGA
CACGTGCTGAATAGACCATTGTGTCTGAGGATGCGTCAAAATAAGTTGAA
ATTTCCAACTCATACTTAGTATTCGGCTCCATTTGAGGGATCAGTACATC
TCCAGTAAAGGTATTGGGACTCTCCATGAAActaatttttaattgaaaag
ttTCTTCTGGTATCCTGAGCTTTAAGATATATAGTTCACGGTGGGAGTCA
TAAAGTACAAAAGGATTTCTTTCCACTGTATCGGGTACATCAGATGTAAA
TGTGAAATTTGCCCTAATCTTCATTATGGGCGTCGTGTGTTGAAATACAT
CCAACCATAAACGTGCGTTGTTTGAAATGACTTctgttaaaagaaaaaac
acagGAGATTGTTAGTTTTACATGTCTTGTGTTTTTACACaattgagtct
ccataacttgaacacgCACGTGAAGcacaaatttattcgagttatggaaa
ttttgagttatggatAAGGTTTGTAAGGTATGGTTAACTGATAGGGTGAG
AAAAGTTGTTCAAACTGGGGAGACATTCCAGtcgtagaggttcgagttaa
agagactctactgtacttACTTATGTTACAAGGGAACAATCTTTGGCGGA
AAGAAACTCTCACGGTGCGGGAATTAACCTAATCCTGATTCGTGATCTTT
GTAAAGTTTTGCACGCTGGATGAAGCTCTCGCGAATTACGGTACTCATTG
GTTCcttggtcaaatttttttttttcaaattacgaAAAACTAAGATGAGA
TTGCTTTTACCGATACAAAAAATTAATACAAAAAAGCGAAACTGGCTGAC
CTTTTCGAGTACAATGTTCTCCACGAACACATTTACATGTATGAGAGTCG
CTGTCGAACTTTGGTTGACAATATATTCGTCCATTTGTCGAACAAATGTT
TTCCGCTGTTGAGCAAATCGTCTAAAAGGAAAATGAGAGTATAACAAAGC
ATTTTACGTCGAGGTGTCCTTTATTGGTGGCATAGGAGTTGTCTTCTTTG
AACTGTCTACGCTATGGTTTATCCTACCTGCCACCTGGCAAAACACTGAC
AAAGTTTTTGGATCGAGTGACTCAATCAAAAAGGAACCATTTGGGAACAT
GACCATACTTTCACTTCATTCGTGATGGGGTCTGCGATTGATACTTAGCG
CAGTCATCGACATGCTTTTCTCAGTTTTTATCTAGATCCAACTCCCCTCA
CATCGAATGTGTTTACTCGGAAGAAGGTACATTCACATACCAATTGAATC
ACTGCACCGAGTGGGCATCGAACACCGACCTCCTTAAGATCGATATCCAC
TGCACTACTGCATCAGTTAAAATAGACATATACTTACTGACAACGTATGG
TGTTCGGCGTCGTTGGCATTGACCAAAAGATAAGGTTGTTTATAGTGCGT
GTCGTCTAAAAGCTGACATCGAAAATATGTCTCATTCTCCGCTATCAAAT
TCAAAGAAACGCAACCAGCACATTTTATACATTCGCCTTTACATTCAACA
ATTGTTcgaacgaaaacacttttgacaGGAGTTTTAATCAGCAGCTTATC
CTCAAATTTCGTCATACTGATGTACGAAACTCTAATATCTTTCCCATTTT
TCCCTTTAATAATTTGATGGCGTaatattttctgttttatttCTGTAGAT
GTGTTACAAACACTTAGAATTGATAAAACCGCCAAAtggaaataaatatt
tttcttttttgacatctTTTCTTGGTCTTCGTATACTGTATCTTCTTCGC
cgaatttttttctgtaatttaactttaaaatattttagaatttttatttt
gactttaaagTTGTTACGAATTTTATGGATATTTCAATGCGTTGAATTCG
TTGTTAATGGACTCCTAAGATTGGATTGTGATGTTGATTGTGATAAGTCT
TAAATAATGAATGAAGTAATTCAAAAACTAAATCTATGGTTCACTCTTAA
TTCAACCACCCATCGTTCCTGTCATGACTAAATTGTTGtaaatatcaaaa
aacttttcaaaaatcttttatatttataacaaataaaaatgaacattctg
aaaattgaaaatgagaattttttggaTTGAATTTTTGAACCTGCTAGAAC
GCCTTTTTTTCTATGAAATCCAGAACAAATAAACCCAAATAGTCCCGTAG
AAGCATAGGCAACAGGTGTACCTTTACCCCTACAATAGGttcagggtgtc
tacgggaaaACCATGAAACCTCAAAAAATAAACCCTCCAACTAAACCATA
AAAACCTTAAAACCTGAGAAGCATGATCTTTTATAGCATAAACATTTGAA
TTTGTCTTTTATctacgattttttttttcgtttgctACTaaacaaaacta
cttttttatAAATGGAAACTGCGAATAGTTTCTCCTTTGTCACACTTTTA
GGATTCTTATTTTTCCCAAGATGAAttattgaaaaactttgaaaaatacc
GGACCAGCCTGTTAATTGTTCGGATTGTTTATGATTtatgttttaaaggt
tttgtttttgacttagactgatatcgtttgcttactcatcaattctaatt
cacaagctttttcacattggattgatacggatgtggagcaagattggtca
gaaagaggaaaagaaaaacatttctttggcttatatcagcataatataaa
aataggcagacactgtcccgatatgaaatgtgtgtctaatatgaaacgga
atcacttatgtaaaaacaaaacctttaagttgaatgttttattcaattca
attccaTCCCTTTCGTATGAATGTATTATTTGTACCCAAACGAGTGTACA
TCAACTCGTCAGTTTGAATCTTACTTCTTCTATTCCGTAGACATGAAATG
CTCAGGATTTCCAGGACCAGGTCACGAAGCACGTATTGTGGCCAACCCAA
TGAAAGAATTCATCTATCCTGAGGATCACTCACATTTACATCAAATGTAT
TCCGATTTTGTCAAGAAGTTCAGCAAACAAAACGTCGGAGAGGAGAAGAA
ACACACCTTTAAACATAACCTCAGGTTAGGAGCTTTTGGAGGactgttaa
aggttttgtttttaaatggaCGTTTCTCTGATGCTGATAAAACAGATTTA
ACAattgaattttatcaaatttgcaCTCGCTTAGCGAGCGAGTCCTGTCT
CTTGGTTAAAAATGTCAAGTGAGCACAAACGATATAAAGGAATTTTCTTC
TTGCAAAGGAGATTATTAATGAAAACTTATGGATGTTTGGGGATTGATAC
GCTGTATGGTACTGACTTTAAAACCGAGTATCCCCAAATTAATCAACAAC
TCCTTCATCCGCCCCCAAAGATGGCGTCTGGTATGGCAAGATAAAGACGA
TTGTATCATGTTCTACTTTCTTTATTTGTATACAGATACATCAATTCGAT
GAACCGCAAACGTTTGACTTACCGATTGGCTGTCAACCATTTTGCGGATA
ATTCACCGAGTGAATTGAGAAGACTTCGTGGACGATTGAGTGGTTCCAAC
AACaaaaaacacatcaaaagcAATGCTAAGAAATTCGTCTCTGCTGTTAA
TGTCAAAGATTTACCAACACAAATCAACTGGCGTTTGAGAGGTATGTTTG
TACATATTCGTTCGAGTAAATCTTTTTGTTGAATGGACTCATACTGGTAG
CGTTCACAAAAAGAAGAAGGTTTGGTACTCCATAGGTAGAATCACGAAAT
CAGAGAGTTTTACTTAGTTGGTCTGGCCTAGTCGACTAATTTCCTTCTTT
CATTCAACTAGACACAGTAAAGTCGAGTAATTCCTCAACCCTTGTCAAAT
ATTTCTTATCATTTTACCTTGAGCCATATAAACTAAATCAATGCCACGGT
CATCTTGAAAAAAGTTAAGGGGTTAATCTTAAGAAACTGCACCAGTTGTT
TTTAAGCATCTCCATTCTTTTCATTGTCTTTCAAACTTATGTAATTTACT
GTctttactttttcaaaactaccaGGAGGAGTGACACCAGTGAAAGATCA
AGCTGTTTGTGGATCATGTTGGAGTTTTGGAACTACTGGTACTATCGAAG
GTGCTGTCTTTATGAAAGTAAGCAAAGTGAATTTGTCAACATTATGTAAA
TGTAATGCCCTAAAATAGTTTGCAAAACATCCTTTTCACTCATTAAACTT
GTCTGATTCATAACTCTCCTTTTTATGCAGACAGGGCATTTGATTCGATT
ATCTCAACAAAATCTGATGGATTGTTCATGGGGCTTCGGTAACAACGGTT
GTGACGGCGGTGAAGAGTTCCGTGCGTACGAATGGATCATCAAACATGGC
GGAATCGCTACGGAACTCAATTATGGACAATATCTGGGTGTGGTAAGTTA
TTTATTCTCACTGTACACGTATTTAGTGAAAATGATCATCTTGGACTAAA
GGCAAGAAAATACAGGTCGTTTTTGAATGGAATTTGTTTTACGTGGTTAC
TACTTTTCATACTTTATTTATTATACACCAGAAAATATGCTTTGTAACAA
AAGAatatagaaagtttttttttaagcagGTTTCAgtatcgttttttatt
ttttcatttttgccgAATTTAGGACTTTAGTTTTATAGGGTTAAGTTTTT
AGCATTTAGAATTTTAATTTTCGATAattcaaaattctttaaatattcaG
TTGAAGTGTCTTTTCAGTACCCTACAGTTGAAGTTGAAATACTGAATTAT
GATTATATATAATTctgcattttttcaacttaCACAGGAcagtttttgtc
attttaaccAATCACAAGCCGGAGCTGTTTTGTCTGGTTACGTCAACGTG
ACGTCAGGATCTGAAGATGCTTTGAAGGAAGCCATTGCTACCAAAGGACC
AACATCTGTTGGAATCGATGCTGCTCATCTCTCATTTGTTTTCTACGCTA
ACGGTGTCTACTATGAACCAAAATGTGGTAAGTTTTAACTGGTGAAGAAG
GTGGCAAGGCCGAAAGACCAAAAATTAAGCAATGCAAAATTGACCAGAAT
ATCTCTTCTCTTTTGAGACTGAAGCCCTCTAGGCTCCTACAGTTTTGATT
CTAGACAGCTATACATAATTTGActttaaatttggatttttgagacTTCA
GATTGACTTGTGACTGAACAAGAAGTTCATGAAGCCCACAAATTTGCGTA
TTTTGAAATTGGAAACATCAATGTTAAACCCTAAATCTTTATTTAAGATA
TGGATGTTAGTATGCTATCTGAAATTAACTATCAGCAGTTTCTTGAACTT
TAATTTTCCTTATACTGTGATGTTTTATTACCTTCTAGGAAACGGTCCGG
ATGATTTGGATCATGCAGTTCTAGCAGCTGGTTATGGGACTTTGGACGGT
GAAGATTATTGGCTAGTCAAGAACTCATGGTCAACACATTGGGGAAATGA
CGGTTACGTCTTGATGTCTCGCAAAGATAACAATTGTGGTGTTGCTACTG
CTGCAACTTATGTCGAGTTGAAATAAAACTTATTATTCGAGGCATTTTAC
CAGTTTATGTCGCCGGTTCAAGATTTCTCAACAAAATCATTGTATATAAA
ACACACGATTGATTAGATTCTCCAATTCTTTGCTAATGTTTGAATTAATT
TATCATCATTTATGAGCCTTTTTCGTTTTACCAATTTAGTATAAAATTTA
ATAACAAAATCTTTCTATATATTTTTAAGCATTTAAGATATTTTTGACCT
TCTTTTGGAACCATTTAGTATTTCAGCATTTATAGTTAATAACTCTTTCa
caatgtaatttttttctagaaaactcaCAAAAAAGATTCCGTTTATG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00056152	TCONS_00056152	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00056152-protein	TCONS_00056152-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_268	supercontig	scaffold_268:128730..142376 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
214.14	221.37	144.02	123.46	125.38	96	96.1	101.22	211.19	155.7	205.39	192.22	164.98	182.03	253.36	264.75	158.17	179.53	216.28	249.44	112.51	112.34	149.76	179.53	194.03	180.83	80.29	111.94	204.33	195.54

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XLOC_035352 (gene) - C. hemisphaerica