XLOC_035362 (gene) - C. hemisphaerica

Overview
NameXLOC_035362
Unique NameXLOC_035362
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_268:163383..166754-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035362 ID=XLOC_035362|Name=XLOC_035362|organism=Clytia hemisphaerica|type=gene|length=3372bp|location=Sequence derived from alignment at scaffold_268:163383..166754- (Clytia hemisphaerica)
GTGAAAACTAAGGTCTTTTAAAGCTGGGCGTGCAATATAATTATTGAGTT
TCAATAGTTCATTCAAGCTCTCCTGGTTGATTTAAAAAAAAGCTAATATA
AACTGATTTGACCAAGGTTTGTGCGTTCGAGACAAATCAGAAAGAAGAGA
AAGGAGAGAGGAGATGCTAATCTATCGGAAAAGATAAACCAACAATGGAA
AAGAATAGATGGAGGTAGTAATTTGTTTTCTAATGAGGTGTTGTAACTCG
TTACCGCCTTCCATGAAAGCTATTCAATTCAGATTACGTATTCAATCTTT
TGTATGTGACGTCATGTGGATACTAGAATCAGGGGGTCATTCGATTGTTG
TATAAAAGCATCGAATTATGGAAGATTGGAATCAATTGACTAGCGATTTT
CAAAACGAGTTCATCTCGTCAACACAGCGACTTTACTAGCAGCAGCAATC
ATAATTCTTGTCTTTTCAGCACATTTTCTTCTTCGACATTTACTACAAAT
CAAACTTTGAAGAGTGTTCAAAAGAAAAAGAATTGTGACTATCATTATAA
CGAAAGATCTGATAAAAAAACTGCAAGCAAAATGTGTGGTAAGTGTCATG
TTATCTTTTGTGATCTTTAAATCGCTCCTCAGTCATCAGTTTCGTTACTC
TGAAGGGATACTAATCATAATCATATAATTACTGCAACTACTTGGCTCAA
GAGCTTTTTGTCTAACAGGATTATTATTTGGGCTGGTTATAGCGTTCTAA
GTATACTATGTCACGGGACGAATGAAAGATTCAACTCTCAGAACTTAAAA
TTGCGTGGATGAAATCATTCGTTATATTCTACAGTATATCCGCACCTGGA
CTTCAACTTCTATTCATGTCCAACTTATTGATGAATGTTGTTTTATCAAT
GGTTGAAAGTGTGAATAGTATTCGTATGAACGTGTGGTATTAAGTTAATC
AAGTGATTATTCCACTTCTACAGCTTAAGAAATCACCTTATAAAACTTTA
GATGATGTTAAAATAGTGCTGTAATAAGAAACCTATTAACAAATCGCATG
AGCAAGCTCGTTTTTTGTATGTTTCAGTTCGTGCCTGTATGAAGAAAATA
ACGGTTCGCAGAGAGCTTTTTAGCGTTTATTTTTAGTTTTGCAAGCGAGG
GTGAGGTCTGCCAACCCATTGTACACAGAAGTCTTACATCTTTACCATTT
CTTTTGTAGACACAATGGCGTATACTAGTGGACCTGTGCTTTATCACCAA
CGAGAAGTGGCCACTGAGGAATTACTGCGACCAAAGATTGTGACTCCATT
ACCTCTTCAGTCTTCTGTTAAAGTTGGCTCCGAATTCAAATTACTATGTC
TTTTGACCGGTTACCCAACCATCGAGATCAATTGGTATTTGAACGGAGAT
CTTCTGGTGGAGACTGAAGACGGACGAATTCGTTTTGATAACCATCAAAG
ATTGCTGGTGATTCGAGACTTGAAACCATCAGATGCTGGTTCAATTACCT
TTCATGCAACCAACAAATACGGAGAAGTAACGTGTAGTTCTCATTTGCAA
GTCTTAATGACCAAACGTGAGAAATTTGCGCATTCAAGGTATGGGAATTA
TTCGTTAAATTCGAGTAACTCACCAAAGCCAATCCGACGTTTGTTACATG
CGCTGAATAGGATGAAATCGTTTTAGAGGGAAGACAGCAGATGAAGGTGA
TATCAGATTTTCAGAAGGAAAGTTGACCTTTGCAATCGAGAATCCACCAT
AGAATCATATAACGCTTTTCACCGAATATTTACAACGGCAACAAAGACTT
TCTTAAGAGAGTGACAATTCACTAAATAACGACATCGCATCTCAAAAACT
TTGACTTGAGACAATAAGGAATATCCATAGGATGTATAATGAGTGATTCT
ATATCGTCATGCTACTCCACACGATTATGATTCTTACCCACCATGCATAA
ACTAACCTAACAAATCCCGGGATTGAAAAGATTTAAAACGAACTGAAAAG
TGAATAAAATGGATAATAAAGAAACCGCAAACCTCCAACCGTGCTATCTG
ACGTGAAAGGCGAACGAAGCTTTATGTTACCCAAAGTTTGGCAATGTAAA
ATTGGGTGTAAAGCTTCGTGCCACTAGCTGAGACAACTTCAATGGAGGGT
GCAAGGTTGACGTAAAGCCTTGACCACACGCCGAGTGCATTCTAAAAGCG
GGTGCCTCGATTCTGACGTATATGCAACGAACTATAGAAAAGACACCTGC
TGAAAAATTGAAAGAATAGACTAATCACTGGGTGTGTTTGGGTTTGTTTT
TAGCACCCAGCACATCTTATTATTGTTTAAGTAAGACAATAAAAGAGCTT
CTAAAATAATTAATAACGAAGGCTCAATAAAGACAATGGGGCCCTGTTGA
GGGCCATAAATACCTTACATACAAAAAAGAAGGGTCCTTTCGGGGACAAA
AAAAAGCTATTAATAAACAAAAAAACTTATTTTTTCCGNAATAAGAAACC
TATTAACAAATTGCATGAGCAAGCTCGTTTTTTGTATGTTTCAGTTCGTG
CCTGTATGATTAAAATAACGTTTCGCAGAGAGCTTTTTAGCGTTTATTTT
TAGTTTTGCAAGCGAGGGTGAGGTCTGCCAACCCATTGTGCACAGAAGTC
TTACATCTTTACCATTTCTTTTGTAGACACAATGGCGTATACTAGTGGAC
CTGTGCTTTATCACCAACGAGAAGTGGCCACTGAGGAATTGCTGCGACCA
AAGATTGTGACTCCATTACCTCTTCAGTCTTCTGTTAAAGTTGGCTCTGA
ATTCAAATTGCTATGTCTTTTGACTGGTTACCCAACCATCGAAATCAATT
GGTATTTGAACGGAGATCTTCTGGTGGAGACTGAAGACGGACGAATTCGT
TTTGATAACCATCAAAGATTGCTGGTGATTCGAGACTTGAAACCATCAGA
TGCTGGTTCAATTACCTTTCATGCAACCAACAAATACGGAGAAGTAACGT
GTAGTTCTCATTTGCAAGTCTTAATGACCAAACGTGAGAAATTTGCGCAT
TCAAGGTATGGGAATTATTCGTTAAATTCGAGTAACTCACCAAAGCCAAT
CCGACGTTTGTTACATGCGCTGAATAGGATGAAATCGTTTTAGAGGGAAG
ACAGCAGATGAAGGTGATATCAGATTTTCAGAAGGAAAGCTGACCTTTGC
AATCGAGAATCCACCATAGAAACATATAACGCTTTTCACCGAATATTTAC
AACGGCAACAAAGACTTTCTTAAGGGGGTAGTCATATGAGATTTTGAAAA
TTGGTGAAAAATTTATCAATTTCGGGATTTAAGGCTTTTTAGTATCCTTT
ATCCTTCCTGAACATACCCTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056170TCONS_00056170Clytia hemisphaericatranscript
TCONS_00056169TCONS_00056169Clytia hemisphaericatranscript
TCONS_00056168TCONS_00056168Clytia hemisphaericatranscript
TCONS_00056167TCONS_00056167Clytia hemisphaericatranscript
TCONS_00056166TCONS_00056166Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056170-proteinTCONS_00056170-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_268supercontigscaffold_268:163383..166754 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.08	0.06	0	5.65	4.41	10.67	10.18	8.59	5.37	3.85	6.1	14.43	9.62	15.49	14.89	34.4	22.62	5.12	4.17	3.8	4.18	1.32	1.34	1.3	1.25	0.18	0.25	1.32	0.93