XLOC_035477 (gene) - C. hemisphaerica

Overview
NameXLOC_035477
Unique NameXLOC_035477
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_272:177555..181041+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035477 ID=XLOC_035477|Name=XLOC_035477|organism=Clytia hemisphaerica|type=gene|length=3487bp|location=Sequence derived from alignment at scaffold_272:177555..181041+ (Clytia hemisphaerica)
aaaagatgtagaaaaagaatccccttgatgaaaatcatgtgtttgatttg
ccgagttaaaaaataaatgacagaaattgaagcttgcaacagatttacac
tcaGTTACACTGGAAAtgctttggtacaacactgacttatcacatctgac
ttatcacATTTCGCTAAATGCTCAGAGCGCGACGGcccattttccctttc
ctatctttcaccttacctgtttattctactttctgagacttagtttctct
cTGAGCAATCAGCGaaatctgacttatcgcttgagccgccatcttgaaac
accacattatgatctgtaaaaacgacgctaaaagtacccaaaaagttaac
ccaatcggaagaaagtttagaaatcaaagtgagatcgggaaatcggattt
ttttttttgccgtctcatggaactggaaaattttacctatttgaatgctc
agcttaggctgaccaaaaacttttacttttaATTTGTCCTATCTACTTTA
ACAGTTCATCTTTTTGGCCATTGCTTATATGTATTAGATCTTTACCTTTT
AGCTTCAAGAACAAGTCACGCGTCTGGGTGACATCAACGAGCGTTTACGA
TCCGATTCGAGTGTCTTATCGAACGAATCTATAACATCCAGCGAATCGAT
TCACAACGAGAAGGCTGATCTTAACACTTCGACTGCATCTCTATTAGATG
AACTACGAATGGAGGATGCGAATTATAACGAATATGAAGAGGAAGAAACT
ATGGAAAATTCGAGTTTCGCAGTCTTAACAACGTCTATATGTCTAACAAG
TGATGAAACGAACGATACGCCCGACAAACAAGATGCACCCTCGGAGCGAC
CGCCCGTCAAGAAGGATCCAGACCGACCGAGATACACGTTAAAAGAAATG
CAGAGTTTACTTGAGGAGAGGAACAcgtataaaatcaaaatgatgGCCCT
CGAAGAAGAGCTAGAACTTTATAAGGACGGGTAAGACCCTTTTTTACATT
TACTTTTTACGGGCTGGAAGTTTCGCGTGGTCAAAATTATTGGCCCCGTA
GTTCTGCTTATTTTTTAGCGAGTACCTCACAAAAATGGGGGATTTTTTAT
TTCCTTACACTTTGATGGTTTTAGGAAAAAGAGGGCTTCGAAAGTCGAAT
GTCTGGAGCCCGAAAATCTGGCAGTAacgaaaaatcccggtttttggtaa
GGTGCTCGCTAGAAAACCTGTAGGAATCGAGAGTGGAGGTGACCCATGta
tcatttgataacacatgTGAAAGCTTTTCAATCGGGTATCAACTCTCCAA
TCGTGTTTGAAGTTTTCCTGTATTTCCATTTTTATTTAGTGGGCCGAACT
TTTTGAAAGCGACACAATCCGCACCAGCCAACGTCAACGATCCCCAAAAG
AAGAATTCTGGTGTTAGAACGTTGTAAGTAGTTGTTCTTTGGCTGTCCAA
TTCTTTCCGTCCCTGCCTTAGCCAAAGAATTTAAATCTTCGTACAAATTT
GTACAGCTTTTCCCAAAGAAAATTGTAATCTTATTTCAACTATTCTAAGC
CGAGTCAAAATACTGAGTTTTGAGGAATTTActttataaattaaaatttg
ctggttttttttgggacaccctTTATTTCTTTGGTTGTCTCCCTGTCGTA
GTTTTGGTTTCAACAACTCCATCTTTAAATatattaaggccggtctccac
ttgcgcgcgctgcgatcgcactttttggtttcaatactttttgcttggaa
aaaagatcatgtcataaaaatgtagcgcgcgcttgtaaaaaatgttgaac
acatttcaacttttttaaccgttacgtcagatcgcgccaatggagttgct
taatttttcttttgaccaatagtgTGGAAGCTTttctcgaaaaagtgcga
tcgaagcgcgcgcaagtgtaGACCGGCCTTTAGGGGATCTTTGAAATGTA
CGCTTTGATATACGAATAATCTTTTTAGAACAAGACTCGTGCCTCAGATG
TGTGGCTTTCAGGAGGTCCCCCAAAATGTAGCTCTTAACATTAACACTAA
TCCTTACGTTAACTTGTTTAATtatctaccttatcggggaaaacttcgtc
gggaaaaagtaacgaaattttggccttaatgcgtttaccaactaccagca
agtgacgaatattttttcccgacgaagttttccccgataaggtatttacT
CATGCTTTTCAACTGTTATCGATTCATTAATcgactttttctatttttta
gtaTGCAGAAATTTCTTGGGAAGTAATCTGTGAAAACCCTGGACGTAACC
GGTCTCCAttctttagtttgttttttatttatatgaAAATATAGTTGAAT
TTATATAATTAtagaaaaagaaaggatttattttgaaaagcaAGAGAAAC
GTTTTAATTTGAgttatgaaaaaattatttctaaagtttttttatcattg
aaaattatttttattaatttttttttttacgttgaatatttttttaaaat
taaattcagTTTGTTTGTTAAGTTTGAAATGTTTGAAATGTTATTTTATG
AATGCTCTATGAAGTGAATATCTTTTTCCACTATAATACTTCGACAACTT
CGAGCTGGTGTTCAACCACTGCATAACTATTTGCTCCTTTCCCAATGTCT
TTCTCACAACCCTTAAACGGGCAAAACCTTTCGTTGGGTAACATTTTTAA
CTCTAAGAAAGTCTCTTGAAGTTGACAAGAAAGGAAAGATTTGCctaaaa
attccgtcactttccCCGACTAAATATTTCACTTTCATGACACTTTTGCA
CATGGAGAATACATTGAAAAGTACTTGGTAACGTAATATAATCTTCCTTG
CATCTAGTCTACACGAGGATGAATAATATATCTCTAATATTTGTTTCAat
atactttaagggcagaaactttcgcgggcagaaactttcacgtttttcgc
ggttttgatcctttttcgcgaagaaagtttctgccaggtaagaaattaaa
cctgaaaaGCGCGAAAGTTCTTTTCgcaaaaaataaactttcctactcag
gtttgcactgtttgctaaatttttgcgtgttttatgagtttttgttacca
aaaagggtaaattttatatgaatttgCGAAAGTTCTTTCTAAGAAATTTC
GGCTAAAACCATaattcgcgaaacttaaattcgCAATATCTCGCCATTTT
TTTAacttcgcgaaactttctgcccgcgaaactttctgcccttaacaata
tattatttcattattatattattgacgaatttttaaagaatataacattt
ttttgtaattcaTAAATACTCCCATTGTTGCTTAGCATTCAAATACACAA
TTCGGAAGAAATTCTATTCAAGTTGTGTTGTACGAGTATtaaagttgact
ctctctaattcgaggtTCAAGGACCAAAAGTTTTCTTctaattagagaaa
gattcgaattacagagagtaatttaaaccattTCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056314TCONS_00056314Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056314-proteinTCONS_00056314-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_272supercontigscaffold_272:177555..181041 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.66	22	6.49	3.6	13.24	10.04	16.97	19.1	10.66	12.95	10.15	8.31	10.64	11.5	13.36	13.93	18.24	19.62	11.45	11.09	10.55	10.72	16.77	15.46	25.45	26.51	36.25	26.49	21.8	17.64