XLOC_035747 (gene) - C. hemisphaerica

Overview
NameXLOC_035747
Unique NameXLOC_035747
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_282:246627..252238+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035747 ID=XLOC_035747|Name=XLOC_035747|organism=Clytia hemisphaerica|type=gene|length=5612bp|location=Sequence derived from alignment at scaffold_282:246627..252238+ (Clytia hemisphaerica)
aaaaaacttcatttttgggcATATTTTGACCCAAATAGacccaaaaaata
ttatttaaaaaatcgggctctgtcacattatTGCAATGAGACAAACTTGC
CAAAAAGTAACCTTTCTTTAATTTCGATTGATATAAACAATATACAATAT
TTCCAGTGGTAGCAAAAAATATCatccaataaaaaataaagtataaaaat
aAGGAAATGATAAATGTACAAAATGACAGTTGATTTAATaattgaaattt
gttgaaagtcaaacgcttttatttataagaaccagtaaattttggctgag
cctgagattgtttttaaatttctacTGCTCCAAATAATAAAGCCATTGTT
CTGAGGGCCTAAATCTGAGGttggtgttcttataaaattgttcttataaa
tcaaaaagcgtgtaacagatcataaaaaagttttagtCAAACTGAAAGTT
TGTTAGAAAAAGAACATTGTCATTATATGATAGAAAGTATCCAAATTCGT
GACAAAACTGTATCTTTactaaaaaattgaagaagcataAAAAAAGAGTT
AAATAGATATAATGTATGATATCAACAACTAAAATTTCATACAAAAGAAT
TATGatacattaaaattttaatttcaaaaatgaatccaattttttccatt
gatAAACAGACCACATCAATCAGTTGGTGGTGAACATATTTTAGAATGTC
CACTTCTCCAGTGAGTGACCTGGCAATTCCTGGAACAATACAAATTAATT
CTACAGCGGCCACACTTCTTAAACTTTTTCTCTCGCTCATCTGGTTGTCT
TTTACCGCAAACTGGATTCGAGCAGATAACAGTTTCAAGGACTTTACAGG
TCTTATTTGTGGTGTTCATATGATGAGTGAACTTGGACAATAAAAGCTTT
TTGTGGTCTGGTAACTCTTCCAGGTTAACCATATGATTGATACAATTACT
GGCAACCTCAgctttttctttcatatttGAATCAAGTTCAGACCATTTAG
AAAAATCCAACAGCACATCTTGCAGCTTTAATTCATGGCATTTCTTCACA
CATCCTTGATGGTTCTGGCAGATAATTATCAAGCTTAAAAGAATCTCCTC
ATAAGTGAAAAATGACACAACTTTCAGTTTAAATTTCAATACTTCTGCGA
GTAAAATGATCAAATCGGATTCATAAATTATAGTAAAAAGGGAATTTGGA
CCACCCAACAGTAATGTTTGTAACAAGTGTACAGCAATATCTCTCAGCAA
TAAGTAGGCATCAGTGGCAATCTTTGAGAAACGTAGCAACTCAACTAAAG
CTTGTATAAGCATTTTATCTTTCCACAGATATTTTTTGACCACTCGTATA
TCTTTTATACCAACCAAAAGGGCACCTGAAAATAAATGTCTGTCAGTGAT
CGGTTTACTTTTTAACATATCAACAACATCTTTAAGCGCCCGCTCAGCTA
TGTGCTGGCACAATGTATCATTGAGTGCTGCATCAGGTAATTCATCATTG
CAAAGGTCTAGTACACGAAAATCatgtttttcaaccaaaaaaagTACAAG
CTCAGCAGCTTCATTAGGCGACTTCCCTTCAATTAATTTGCTCAATGACT
CTCTTTTCTCCTCCTCCTCTGCCATGTTCTTAATTCATTTCTCTatcaaa
aaagtgaaagtaaTTTGCTTTTTTAATGCTTAATAATATAAAAAACCAAC
TCAATAAACAATATCATCCGGTCAAAGCCATGAAAActatttatttgttt
tatttttcacatcTAACGTTAGACATGGCGGCTatctaaaatatgttccg
ttcgcgtcgcccgaccgactcaccttcaaaacataaatcccGAGTCGGGC
AAGTTGGAAAAATGTCGGAAAGTTTTTGATAGCTAAGCACTTCTTTGAAT
CATCATTTGCTACgagtttttatttacttaacccacattgagtcccgttt
gagttttttcatgtatccttattgaaattttccagTCGAAATTCGGCGAc
gcggtagggccaatacccCTGAGAGCCGAAAATAtttaaaacaaattcat
acTACAGTGTTTCAAGtgattttatttgctttggtaAATTGTTCCAAGCC
CTGNAGTTCAGACCATTTAGAAAAATCCAACAGCACATCTTGCAGCTTTA
ATTCATGGCATTTCTTCACACATCCTTGATGGTTCTGGCAGATAATAATC
AAGCTTAAAAGAATCTCCTCATAAGTGAAAAATGACACAACTTTCAGTTT
AAATTTCAATACTTCTGCAAGTAAAATGATCAAATCGGATTCATAAATTA
TAGTAAAAAGGGAATTTGGACCACCCAACAGTAATGTTTGTAACAAGTGT
ACAGCAATATCTCTCAGCAATAAGTAGGCATCAGTGGCAATCTTTGAGAA
ACGTAGCAACTCAACTAAAGCTTGTATAAGCATTTTATCTTTCCACAGAT
ATTTTTTGACCACTCGTATATCTTTTATACCAACCAAAAGGGCACCTGAA
AATAAATGTCTGTCAGTGATCGGTTTACTTTTTAACATATCAACAACATC
TTTAAGCGCCCGCTCAGCTATGTGCTGGCACAATGTATCATTGAGTGCTG
CATCAGGTAATTCATCATTGCAAAGGTCTAGTACACGAAAATCatgtttt
tcaaccaaaaaaagTACAAGCTCAGCAGCTTCATCAGGCGACTTCCCTTC
AATTAATTTGCTCAGTGACTCTCTTTTCTCCTCCTCCTCTGCCATGTTCT
TAATTCATTTCTCTatcaaaaaagtgaaagtaaTGCTTAATAATATAAAA
AACCAACTCAATACACAATATCATTCTGGTCAAAGCCATGAAAActattt
atttgttttattttcactttATCTAATGTTAGACATGTTTACATAGTTAA
ATATACTAATTTATGCCAACAATATACTAAAAACACTAAAAGtgtataaa
atatttaaaatacagTACACAGTTTGCATTGGCAGTAAATTTTAATATCC
TCgacttttaaaacaaattcatacTACAGTGTTTCAAGtgattttatttg
ctttggtaAATTGTTCCAAGCCAAACCAAATGAACCAAGTCAAATGAATT
AAGGCAAACTGTGTTTTTAGAAAAGGAAGTTTAACTCTTGAACCACATCT
TAGTTCAAGTTTTATTGTCAGGATTTTTGGGATCaataataatttcaatt
ttttcaaatgcaTTCCATCCTATTTTAGGGTCAATGTGGTTTAAGAATTT
AAAAACTTCCTGTAACATAAGTTGGAAGTTTTGTGCATGAACAGGCAGAC
ACTCTGATATTATCAATAGTTCATCATATCATGGACAGAGGTATACCATA
AAGAAATTATACATAaggaaacaggagaagtatgctattgtaaccaagct
cgccctacgattaaaaaagttacgatgtatgtatgctcataatctcatat
attgCATTTTTAAGCTCTTAATTACCcattggtgaaatcttattggctca
atgaagctttaagaaaatatttggactaaaaaaggcctgtaaacttggca
atcctacatcaaattataagattttttgatcaatgttttctttaaggtga
agtctattgcttgatactttactccaaaattctccagtgaCTTTaagtct
acaaattgagtctgaaattgtgtctgctttcaaaaaaatgacgtagaaaa
aagttggtaaaaagtatgtcattttatcttaacaattttgtaaactCTGT
CACAACCACGgagcgctgacttttagttttttataaaactgttttttttt
tgcttagtggtcagagaggaataatcctttttcaatcagtgattcaagct
ttcatattattcctttctctaaagaagggtgtcggaattagacgagggat
gtcaatataagaccaacttacagtaacTGCTTTGTCAACTACCTTATCTG
CCTAAACTTAgttggccctaagtgactacCCTCAACTGCTATAACTTGGA
gcgattggttgaaacatgggactagttgatctggcctgtattttcactta
ctgttaaatctctttgacaaaaaatttgttttgataactccaccaagttt
atcaaccaTACTTCTTTGTTCCTCTTAAAGTGCACAGACACTCATGTGTG
TTccactatggatttttttcatatttcgattttaaaagcctacttggtgg
gaaagagaaatcatgtattttttaatacgccgttcattaaatCAAATTAA
ATGACTTCAAGGCTTGAAATAGCGGTTGTACATCGGACATTATCCGACCC
AATTTGCCCCAGGTTCGAcccaaaatttatcatttctaAGCCAAAAACAA
CCCCTGTTGgacattgggccattccagaaaatttttgttaatccCCGTCG
GACGGCgtgaattttttcattttttctagccttggaaataatttttcttt
tccagtggtgatCAGAGattccgataaaaatccatgtacttaTGCAAAAT
GCATCggaaattccactcttttttgccttttttaattcaattgccttgga
aattcatacattttcttctctcgccttggaaatttcgaattttggtgaaa
acttttgctcTCTGAAATCCTGTGTtttcatggtttcagcccacttttca
ggtgcccccattgagcatggtgcccccagcaatttaggtccccttgaaaa
attgctttgagttaggtacccctattcagcagataatttctttgaattga
cacattttgttcttttgtcattcctaaaatcaTGCTCACACATGAACTTC
TGCTAATAagctttgttgttatgctataaagatggcggctgtaaatcaaa
acaatcacattagaaaaatatagcaaaagatggcgtgatgggaaacGAAA
GAAAAATTGGATGGGAAACTAGGTGCTGGGGTAAAAAATTCAATAATTTG
AAATATTTTGAAATATTAGATTTcatcaagacagctaggtacccttaatg
aataggtaaccccaaagaattgcaaggcattagcccccctctactaacct
ggcctaggtgcccatcagatttctgggggggcTGATACCATGGTTTTCCG
CCCCCCCTCTGTTAcggacaaattctggaatggcccattttgtccgaccc
agttgaaatcgttatttcgagccatggactttggaggtttggtaaaatgg
tggccgaattgccgtcccatgttttgtcagatagttccaagttagagcag
ttgatggtaaattttggcttggtgactaaaattaggaccgactaaaaatt
tgggccaactaaaatttgggctaactaaaaatttgggccaaatttaaaat
ttataaattaagctttccttattttccagtattttaagctttctcctatt
ttccatctgcttgtaaatttagaaatggcccaaatttttagttggtctca
attattagtcggcccttagtgactaaattttggcgaggtgactaaaatta
ggaccGACTAATAAAATTTGGCTGATATAATAGCTGGGAGACGCGTCTGC
TCTCTGTTTGTGTGATATTGAAGTataataccgtgagattgggtaacttg
catcagtggagg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056738TCONS_00056738Clytia hemisphaericatranscript
TCONS_00056739TCONS_00056739Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:246627..252238 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.97	28.74	9.27	5.76	16.2	12.34	13.6	14.57	12.14	13.09	9.36	6.38	8.28	7.01	6.7	6.6	13.18	10.82	4.1	5.05	12.82	8.98	32.22	28.35	9.99	11.93	7.6	3.87	18.07	20.41