XLOC_035826 (gene) - C. hemisphaerica

Overview
NameXLOC_035826
Unique NameXLOC_035826
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:682383..686576+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035826 ID=XLOC_035826|Name=XLOC_035826|organism=Clytia hemisphaerica|type=gene|length=4194bp|location=Sequence derived from alignment at scaffold_284:682383..686576+ (Clytia hemisphaerica)
AACATTTTCAACAACTTCAAATGAGAACGGAGAAGCACCATCAACTGCTG
TCTCCTCCACTGAGtgtattttgaaatgtaaaacTACTGATTCTTCAACG
ACAGCTTATTTTGTTGAAGAAGTATCGAAATGTTTTTGTCTTGTGAATGA
AACTCAAGATATATTTTCCAATGATATCACGATCAATGGGACGCTGTATA
AGCCAGAACCTGTAAGTAAGACGAAAATTATTCACCTATCAACCTTGAAA
GTGCGAggagactgggttcgagttttaggccatgttcagacgttatggtt
ccgttccgttccgaagcaagtgtgaacgtcaaaattcgaaacgtcaaaaa
agaagacgttacaaagcaaaacggtttcgctccacttttttcatcggaac
ggaactgctctgTTTTCTTTCTCCGAAACATTCCAAAACCAATATGAGCA
CACTCGATTTGTAACGAGAATCATACCGGAGCAAAAcagaacagtaacgt
gtgaactaGCCTATCTAtatcccaacacgcgatttttttatcaccggaac
ggtgtcgaggaaaaagccgtggtcgtctggcGTCAAAATGTCTGAAGTCG
TTGCACTAAGACAATGTTCAGatgttactgttccgtttcgctccggtttg
attttttgttacggatcgagagtgttcatattggtttcgaaacgtttcgg
aacaagaaaacggagcagttccgatgaaaaaagtggagcaaaTATGTCTC
CAtttattttgctttgtaacgtcttcttttttgacgttttgaatttttga
tgcTAACAGTCTTATGGCTCCCGAAAcagagacggcccccaaaacggagg
tcgtcattaaaatgaggattctaaCCCGTAGATTTATCAGACGTCTAATT
ctgatttttgcttattttgaaagaatgatgattatacttaaaaatgagca
tgtttttgatggtttgagacggattcaaaataacatatttgtgtctgaag
gaaatatttaaacaccaaaattagataaaaattgcatatacctcattcta
gctccttggatagtgaaaataagttatgaaaatggggtataggaaacttt
ctacacctaatgcaaaaacggcaaattccgtcatttttttacaaaatgta
ggagaaaaatacctttaaagcttattattttcagtttcagttaagctgtt
tttctaaaaatttcatAGCAtcttccatacatgaatggaactattttcaa
aagaaatttgattaaaatgttgttaaatcaaaattctcatttcgaaaatt
tctaaattttcagtttggatcatctttgcatcatcgaaaatcttgaaata
ttttataaaagtcataaattttacatccttCGGCTtataaatttaaggga
aaatataaatatgttcatagtttctccccctattaccactgggcttgata
atttgattttaactacacctacgtNaaaacacaaatatgttcatagtttc
tccccctattaccactgggcttgataatttgattttaactacacctacgt
tttgggggccccaagcctccgttttgacaaccaggaaGTATActctaaaa
attttatcaaacaaactaatgcccaaaaccctctaaatcatatttcaaaa
ctatggtcaaaattttgtattcatatcttaaagatatctcaagaaatcgc
taaaattgcaaacctccgttttgggagCCATtaaaaaaagctacctatct
ttaagcgaatgaaaaatattgctgaaattgaaaattttgaaaaaaaactt
atgggaaataaagtagagatgttaaagtttttcatggagcaaaaattttt
gtaaaacgtctttttcttttgatttgagagaaattttaaattcgatcgac
gttttgggggccacatactgtacacTTGTTTATTCGGAcccgtttcgttt
cggagcaaAATGGAACCGTGACGTCTGAACGTCGATGGTCTGAACATGAC
CTAATTCTCAAAGACAACGAATGTTGACGTCATTACGTAACGTGTACCTT
TGAAAGCTCTCCCACACAGTTAGCGCAGTTTTTAGTTCGTCAGAACATAA
TTATTTTTACTCTCATTGATTATTTGATAAAGAAAACTTAGCCTGTGGAT
CTCAgggttaaaaaattgtttttcgtaCGTATCAAAATAAAAGGCTTGAA
GTTGCTTTTCTGACCAAGTTTTTTTGCGAGCAAGTGAACCAAAAACAACG
TCTGCGTTAGTTTTGTTGCTTAGATTAGTCATCAgacaaaatttccattt
tttatttGTAATGGAACGATATAACTGTTCTTTCTTTAGAAAATGACATC
ATGCGGGCAAGTCAAGGACAGATCTCGTTTCTCAACAAACCCTGAAACAG
GTTTCTACACACTTGACAAAGACAATGTACCAACTGACGTATTCTGTGAT
TTCACAAACCAAGGGAAACCTTCTTGTAAACatctgaaagaattttgtcC
AACTTGTGCATCAGGATTTTACacttttgaaatcgaaaatgaattGAATA
AGGTTTATTGTGAAATGGATGTCGATGGAGGTATGAAGCATATGCATTCT
TATCTTTTAAGCTAAAACACAACGTTGTTGCAAAATTTGTCACACATTCC
CTTAACTCTTTCTAGACGTGTGGGCCAATATTctgagtttttttcttttt
tcaaaaagtgaaattttctctCCCGCGAAGGGTTAATATTGCAATAGATC
AGCCACTCTTCCAACCTCGTTCCCATGTATCTCagactttatttacgtta
ctggtACGCATAGGCCTTTTCAAAAGGTATGTTCCCAAGTTATTATTTTC
AAGATGCTACCTTGGGATTTTCCAGGTATTTTGAGGGTAACCTTTCGGAA
CGGAAAGATTTGGGAGAACAACGGCTggctttcttgtttttttttgtcca
TTGAAGTGCTCAAAAGATCATCCATTTACAGGTTACATTTTTCATTCCCC
CTCTGCGAGGTTTGGCCTCACACAAAAATAAGATGAAAAGTCAAATCAAT
CAAGTCAACTCCTTTATGTACGTTTTGGAAGCAAGGTAGATTGTATCACA
GACCTGTCGCAGGCAAGTGATATcttcacccctgtatcacagacccgctg
aaaccccagccccactggaaaatttggaaacaaTTTCGTCCCGGTTGGGA
GagtaccctggaatttcagccccactaggaAATAGACTTTGATTTCATAC
CCATTCGAAATTCCCTGCTCAAaaactgcactccaaaaccatgctcactg
gatttttcaacaatataatttctatccccattggaattacactaggaatt
tttatcccactaaggaaaaaaagttccaccggggctgtgagacagggtat
CTATAGCGAATACGAATTCAGCTTAGGTTGAAAACTTTATACACAGTAAA
GTAATATCATCATCCATTATTTCGATACTCTTCAAGGTGGCTGGTTGATG
TTTGGAAACTTGGAAATCATCCCAGATGCAACATCTTTAGACTCTGCTAA
CGATGCTGTTCAAAACCCATCATCTATATCTGAACTTCAAAATGTGCAAT
CGGGATCTTTCTACTTGGCACCCACAGAACTCCAAAAGCTTTACAAATCT
TCTGGATACAGTGAAATGCGTATTATGTGTTACAAAAAATGGCATATGCG
GACCCTAGATGTCGTTTTGACTGGCCTCAAATTCGTTGACTGGATGGTTA
GTGGTTTCAAGAAAACTGGATTGTGTGGTGATGTGCGATTTCTACCAATG
GATGATTCATTCACATCTGTTCAAGCTTGTTCTGGATTGAAATTCGGTGG
AATTCATCTTATTTATGAGCCGAACCGATACCACGTGGTCCTGGGATATC
ATGGCACGAAANCcatttttgccccccccccccagttgctacggcactgt
ctAGTGATCGTACCTTGGAAAAACTTATAATCTCAATTCGCAGAACGCAG
TGTTCAACAATAAAAAGTtcattactgcagtgacgtacaaaatatactaa
aaatacgaatcctatgaaataggctaatatTTTAGGCTATGGTCGCGACC
CGTAAACAATTAATCAAGTTGGTCTCGCATAAAGAGAAACGTGAAATTAA
TCTAAAGTATATTTAACTATTTAATACCACATGCACACATTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056868TCONS_00056868Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056868-proteinTCONS_00056868-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:682383..686576 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.05	0.16	0.12	0.27	0.98	0.66	0.87	0.85	2.52	2.27	4.29	3.65	0.29	0.12	5.74	12.91	0.17	0	0.04	0.04	0.28	0.29	0	0	0	0