XLOC_035870 (gene) - C. hemisphaerica

Overview
NameXLOC_035870
Unique NameXLOC_035870
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:911538..919548-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035870 ID=XLOC_035870|Name=XLOC_035870|organism=Clytia hemisphaerica|type=gene|length=8011bp|location=Sequence derived from alignment at scaffold_284:911538..919548- (Clytia hemisphaerica)
CCTCGCTTTCAAAAGCAATTTCCCATAAATTATTTTTCAATACGAGGCCA ATCAAGAAGGCTACCTTTTGAACGTGTATCTTTCAAAAAGTCAAAACAAA ACGTAAACACAAGACGAAAGACTGGAAGACCGAGTGAGAAATCTTAGAAA CTTTATAATCATGGTAAGTTGTTAGATTTTTAATTCTGGGTCACCTAGAT TCAGTAAGTCAGGAGAAGCAATGATGCTGTGTTATAAGTGGTTGTTGACC ATTGTTGCTGCACAGCCGTTAATCGGTCGATAGCGTTCGATCGTCGATTC CGTTCGATTGAGATCGTCTGGGAATATGTCATATTCTATCATATTATATT CGAAAGCATCACTGGCCGAATTATTGAAAAAATTAAAAAACATGAGGTTT CGTGAGGTTTCACTTCCATGAGTCGGCTGATTTTTTAAAAATACGCGCGT TAGTTTTCAGATGATGAATGATTAGCACAGCGAGCGCTATCGTAATTATA TCGCGGATATCTTCTCTGGAACATTCCGGTGGAGACCAATCGCCGAAAAT CTACCTCTGGAACACCGGAAGTGCTCCCGAATCTCCCGAATGTTCCAGAG CATGTTTCCGGAGCGCCGGGAGGGTCCTAAATTCCGCAGCTTTACTGCTG CATAATTTTGCAGGTCTGGCCTTTGGACCAAAATCGGCATCGCATGGCCT GGACCGGTGTCCCAAAATAATGTGCATTTAGAAGAACAACCCATAAGAAA ACTTTTCACCCTAGCATTTTAATTTCCTACCTAGCGATTTATTCACAATC ATTCTTGGAAGAAATGCTACTTCGTTAAAAAAAACGCTACTTTGTTCAAG AAAGCAAGTATTTGCCTGATTTTGCATTAGGCGGATCTCTAAAAATTGTT TGGTTCCCGTCATCCGACCGACCCTGATTTTTACTCTGAAGTTAGAGTCG GAGAGTCGGAGACCCCTTTTGCCATTTCTGGATTCCTAATTGTCAACCTC TGGGTGCTCAGTGTTTACAAGTTTTCAAATCGAAATAGCAAGCGCGGCGC GCCAGCGGAAAGTGAACCAAAAACCATTTTATCCATGATTTCTCGATTTT TTAACCCGATTTCATAATTCGGACCTTCGTGGAAGCAGACCGCGCTCGCG AAGCATCACTTTCTAAAAAACAAGATGTTGCATGATGATTATGGGGCTCA CAATCAATGAACAAAGATGGTATGTATGTACAAAAAAATATTTTCGACCG ACCAACCAACCCACTTTGTAAAGTCGAAATGACGGGAACCAAGCAATTTC TAGAGATCCGCCTTATTTTAGAAGAAAATTGGTAGGCGTTCATAATTTTT AAAATCACAAGCTTCAATTGGAAGCGTTGTGTAAAATAGCAGCGCAACCC TGGGGAAACGCTGCGAAAAACTGCAACGTTGCGGAATATTGCAACGTTGC GGATCTATGCAATTTGCAGAACTGAAAAGGACTAGGAACGACTACAAAGT TAAGTGTGTTTGTGTTTCTGAATAGCGCGCCTTTTCAGTTTTTGACTTTC TGGCGCACAACAAGATTCTTGTTGTAGAATTTTCCGTGGAAGGACTATTT TCCTCAGATGTATAATTTTCAAGCGCCTTCAGAGGTGGACTTTTTGGTTT GCCATCACCCGACCAACCCTACCTCGAAACCTGCCGACCCAAAAAATTAT ATTGCCATTTCAAAGAAGATTTTTTTCCTTCAAAAACTTCAAATAATAAA AAATCAAAACTCGCATCTTGTTTGTCTCAAGTATAAGAATCCTAAATTCC CTGCTAGCACTTCTGTTTTTTATTCAAAATTACCTAAATATAAACAAACT GTTAACCCTTCCATGAACGAAAATTTCATACCCACCTCCAAAAATCTAGG TTCGGTGACCGCAAACCAACAATTTTTTAAGCCCAGCCTCAGGCTACCTA CAACTCAATTTTGATCGGCCTCAAGCCAAACTTCCAGAGTTTTCCAGAGC AGCTAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCATTTGGGTAACCTCAATT TAACCACATCATATTTCTAAGTATTACTCAGGATTGAAGTAACCTCTTAA ATTCGCGTTTCTTCTAAATCCACGAGAAATTTCTACTTGAGTTCTTCAAA GTTTTGATATGATAACCTCAAAATTCCACCAGATATGGTATCAGATATGA CAGAAGGTAGGAATGTCACAAAACCCCCTTTTATTTCTGACTGTGTTCAT TGTACAACAGTGATATGTCAAGCTCAAATCCTAGCTTTTAGAATCAAATT TCAACAAAAAATAACATATGATAAGATTCTCTCTTGCAAATGAATCTTCA ATTTTCAGGAAATCATAGTTACAAAGACCTTTCAAGACAACTGATTTCAG TTTACAAGTTTTTGTTCAATTACAGCAAAGTATCAAAAGCCAAATAATAA TGCAGTTTAATGTTTTTTGCTAAATTTGACAATAAAGTTATGTCCGCAAC TAGCAAGGTTACATTTTCTAATTTTCTGTTGACTAACTGAAATATAGCAA ACTTTTGTTTTTTTTTGAAAGTTTATGATGAGTCTTTCAACTCTAGAATG AAATTACTTGATCATAGCCAGTTTTCTTTTCATAAAGTCAAACTTTATAG GAATGATTTTTAGCATTTTAGATTTTTTTTTTGAAAAAGCGTCTGGGTTT TAAAAATAATGCAATACTGGACAGCAAAATTTGATTTTCAATGCAGCCTA ATATATTAGCCATGGGCTGAAATCTAAGACAAGTATTAGATTATGCATAT TTGTGACCTTCCAAGCGATTTGAAGTACCTGAAAATCAGACTGGTCTCGG TCCGCTATTGCAAGCAGTCTAGTAGCGGACAAATTTTTGTTTTAGACCGG CCTTCAGACCATCGAGAAATGTGATCTCTAACAGTCCTGGCTGCTTCTAG TGGCCACTTGTTAGACTGGTCCTGAGCGCTCATTAGACCGGTCTGGGCTG TTGTAAAATGATATCGACCAGGCGATGGCGATCAGGGCCGGTCTGGGACT CTTAGCAGCCTTTTGGTTATTTATCGACCCTTAAAAGCCCATCTAAAGAC CGGTCCTATTTTCAGGTACTTTAGGCGTACAAACTTTCGCGAGCAGAAAC TTTCGCGAGGACGAAAAATCGCAAAATTCACGACATTTACTTTCGCGTAT TTAACGGAAAAATATATTTCGCGAGCATAAACTTTCGCGAATCAAGACGT AGAATTGAGAATTTTCACATGAAAAAATGGCTTAGAGGGACAAATACTTC TTGGATTGGCTTGAAACATTTGTCCTTTGACTTATTAGTCTTATAGCAGG CTAAAAAGTTCCATAAAATTTACATTTTATTTAAAGTTTGAAGATTTACA AATTATCTATTTTGTCAAGAATTTTTCGCGAGCATAAACTTTCGCGAATG GCCCTTCCTAGAATTTTTAAATACATTTACTTTCGCGAAAAGGGCCAAAA TGCGCGAAAATCGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAAAG TACTTTAAATCGCTTGGGGAGTCACATTTTATTTCAAATGGCATCTAAAC TACAAAGAACTTTTTGCCAGATTTGTCTGATTATAACTACTCTAGGTCAA ATTTCTGGACTAAGCCAGTTTGATTAAGCTCTGATATTTGTATTTTCTAA AAATTGAAGTCTTGAATAAAAAAATCATCCAGGAATGAAATTCAACTTCA AAACTTTGTTTTTCCAAAGATTTTCACATAGGGTGACAATACCAGACTGG CCCTATTGTTAACAAAATTTAATCTCAACACTAAAGAATTGCTAGAGTTT GAGTAGCTTGATATTTCAATCAACATTTCTTTTTGGTTAAAATCAATTAC ATAATTTCATAGTGATTTGAAAAAAACAGGGATTTTTCAAGCCAAAAAAC TCAATCTAACTCAATCCAAAGTATAAAAGATATTTTCTAGCAAAATTAAA CTTCTTTGTTGTTTACAAACAAAAATCTCTAATATTATCTACATATTCAA AACGGAAAAATGAATTTTCTGCTTTCTACATATTCAAAATATGTTTTATA ATTATGTTCAGTTTTGCCCTCTGAACACCAACCAAACTCCCAGCTTCATC AATATACAGCTTTGCTGAGAAAATTCCCTTTCAGGCATATTAGAAACTCG ATCTAAGTTTATTAAAACAGCCTCAGCTCAAAGTGCTTTATAGAAAAATC CCTGCGAAAAGTTAAAATTGTATCAAATAATGGGTCTGAATTTAATTATA TTTCATTATTATTTTCTTTTTAGATGTTTTACGTTTTGTTTTCATTATTT GTGGCAACCGCCTTCTCAGCTGATCTTGACTCACAAGCCAAATTACTAGC ATCAAAGACAGTAGAAAATAAATTCATCGTTGAAAATAGAGAACTCACAA TCAAATACAGTATCTACAATGTTGGAACTAGGTAAATAAAACATTCATTT TACCATCACTTATTCATTGATGATTTGATCAGGGATATTTGGCCTGATTT GGCAGAGTCATCTAGAAAGTGACTATGGCTAAAAAGATCTATTTACATTG TCTTTATACAAAAAATGGACTTTCTTTTTTATCTCAGGAGATTTCCTTTG TCTACTGTGCTATAGACTGGTGAATGACAAATTAACTCAAGGGAACTATA GATTTTTGGCAAGCAAATGCTTAGCAAATCCATTGTTTCGATAACCATGT CCTTGGGCCAGTGTTTCAATTGTTTAGTTACCAAGCCCGTGTCATTTTAA AATTCACTCTATTAATCGGTATTGTAAATTCATTAAATTGATGAAAAAGC TGTTTTAAAGGATGGTTGTTTTATTAAAATACTCATGCTCATCACATTAT TGATATTTTGTTTTTCGTGTACAGTGCTGCATCTCAAGTCAACTTAGCCG ACGAGACTTTCCCAATCCAAGACTTTGAAGTTGTCCGTGGACAATTACCA GCTGCCTGGAAAAGCATTGCACCAAACGGAAACGTCACTCACATTGTCGT TTACAAACCATTGAAAGCTGGATATTTTAACTTTACCTCTGCTCAAATCA CATACGTCCCAAGTGAGGGAGCTGAACTCCAAGTAAGAATAAAAAATTTG AATATTATTCACAGTTACTTCTACATTTATAAGTCGACTAATTTTATTGG AACTTGAATTTATGTGGCTACAGGCCACAGTTTAGAGTCAAATTTTGCAA AATTGTCCTGCGTGAATGCTATGTTCTCTAGGTATTTCAAAAACAATTAA AATCCTGTTTCTGTATTTTCAAATATTGCCAGGGTCTCTATTTTCTGTTC ATTTTGTTGCAGTATGATTAAATTCTTCTGATTTTCCCTTTCTTTCAGAG GGCATTCACATCATTCCCAGGTGAAGGAGGTATCATGACCGAAGTTGACT TCGCCAGAAAACATTCCCCTCATCTTGTAAGTAAATGATGCACTTATTAT AAAATTGTATTGGCTAACTTTTCCTTTTTTGGATATTGGTCACAGTTGCA ACATTTCTCAAATTATTATTATTGTTATTGGAAAACTTATTCATCTTCAA TTACTAAATGGAACTTATTTTCAATCTCTTTTCTTTTTCAGCTCGAGTGG ACCATCTTCATTTTGATGTGCTTACCATCTCTTGTCATCCCATTCTCATT ATGGTATAAGTCACACTCAAAATACACTAATGCACAAAAACCCAAAAAGC AATAGATGATGATGCGACAATACTTCAAAATCATCACAACCTTAGGCTTT ATAAATTATTTAGGGACTTTTGAACTTTTTCTATCAATCAGGAAAGATCT TTAAGTTAAATTTTCTAATGCATTTTTCTTTGTCTCTTTTGATTGCGTTT TTTTGTAGGATTTGAATCCTCGCCAGTCCAATTCTTGTCAGTTCTCATCC TTTATACTCTATACTTCTTACTTGTTATGATGTTCTAATAACTTCATTAT GATATATTTTCAAGTCAATGTTATTATTTTAGAATAACACTTTTGTTTTA AAAACTAGTAATTTTTTATATGATACGTCGAAAGATAAATAAAATGGTGT TCAAAAAATCAAATACCTCACTGTTGTCGTTTTCTTTGGATGAAATTTTG ACTTTCTTCTTTGTTCAAAGAAAAGTAGAAATTTCCTAGTTTTCTAGATT TTATAAATGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056959TCONS_00056959Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056959-proteinTCONS_00056959-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:911538..919548 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SSR2PREDICTED: translocon-associated protein subunit beta isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
308.74 333.92 294.55 289.55 382.35 306.91 746.52 761.75 407.12 482.37 276.48 376.34 208.75 209.72 243.06 272.72 257.03 232.37 76.95 115.3 140.54 141.92 186.29 188.92 184.2 191.75 128.25 97.61 269.74 185.39