XLOC_036027 (gene) - C. hemisphaerica

Overview
NameXLOC_036027
Unique NameXLOC_036027
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:34619..44754+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036027 ID=XLOC_036027|Name=XLOC_036027|organism=Clytia hemisphaerica|type=gene|length=10136bp|location=Sequence derived from alignment at scaffold_286:34619..44754+ (Clytia hemisphaerica)
gcatactcggcgccttgggccccgcagggttgctagtaacggctcgaatt
tcagtcaggttaaaagtcgatgtcggaatgagcaatagacaaccttcttt
tgagaccttgtaattatcctctcCCCCTCTTCGCCACTCTTCGCTTTCGG
ACGTGAAGTGGTCGtttaaacataaaaatgccCTACATGCAGATTATGTA
GAGAACGATAGATTCAATCGCGGTGTAATAAACAAAGTAATCTGGGAACG
AAGTTtgtttcatatatttttttaaaacactCTTCAAAAGTACGACAATT
TTCTTCAGTAAGCAGGGATGTATAGAGAAAAGAATCATATTGATATTTTG
AAGCATGTTTTAAAAGTAagctgaaaaagaagaaagcgAAAGCAGAaact
caaaaaagaaaagaggtTTTCCAAAGAAGGAACTGGAAAGCCAAACCAAA
AGCAAGGTATTTTCTCAGCAGCAAAGCAGAAAGCAACCAAACCAGGCACA
GTCCAACAAAGCCAAAAATCTAAAAGGTACTAACTTCTTCTTCACCCATT
TTACATTTGATTTAATTGCAATTGTTGAACTGTAGAGCCAGAGGCTTTAA
Ctctcagttacatcaaaatgcctcgaaaatgtcaatatgaaaattgcgta
atcagagaacgtatgtctcgctcattataaaaaggccgaaacaaactttc
aataattggattgtaacatcgagttaagcctcttttgttaagtcaccagg
gggtaaataaaacagaccttgatacatttatagtttgtttcaacttgaca
attcatttaaaactcagcctcctaaatatttggggtaggtaaaacatgta
caaagaaattcatacttttccaacccggcgaatctttaaaaaagaagcga
acaataaaatataattaccctttccaaataaacctcttcggtggcgagcg
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNactctgttctcacacttatgtcttctttttttt
gcgtccttttccgtgattacttttatttatatttttaaagacaggtaata
aggcatattgatgtaactgactcTAGTTtttatatagaccttttttcaaa
gaggccaccctgttgaataattatatagtccagcagaaaaaccaTGATAA
AACGCAGCTTGTAAAATAGAATATTCGCGCATCCTTTAATTTCCTGCAAT
TTCTGGGATATGTTTTTGACGATTTTAAGTGAGTTTTACTTACTTCCAAT
GTGTATTCAAGCTAGATTTTATATCCCAGAGGCATATACCATGAATCAAG
GTCGCATTTTATTAAAAGAGTCCTAAGATAAGATTTCTACACATTCAGAA
TGATTACTAGTTTGCACACTGCGAACACCTTCGCACTACCAAGTGCACGA
AAAAAGGCCTATTTCGCGGGCCTTTTATTTTTGCGCACAtaaccagacga
tgtcaatcgaacggaatcgaacgaaaattccaatcgaatcaatcaaacgc
aatcgaacgcaatcaaatgattgcgattcgattgccgaacgcaatcgaat
atcaatcgaacgtaaaattctgggtaaaattcgattgattcgattgatat
tcgattacattcgattgatattcgattacgttcaattgatgttcgatgac
gttcgactgcgttcgacaggtggtcgattaaattagattccaatttacct
caattcctttcaatttcgagcacctcttattagggaggttaagtatcgat
acgATCAGATACGATAGATAAATCAACACAACGAACGGGCTTTTACACAC
AACCTACATGTGGGCCtgcatgatctgcattttctagaattcaggctaaa
atgattcatatcatctcgtttaactcttcaaatgttgaacgagaatcaac
gttaatcaacagaatcaattagTTGAACCAGTTGAATGCATAAGCCAACC
GAACGTAGTCGAATCAGTCGAATACATtagtcaatcgaacgcaattgaat
caatcgaacacaatcgaatcaatcgaatccaggcactaatcgaacgcaat
cgaatcaatcgagaaaatcgcggtaatattcgattggcattcgattgcgt
tcggcaatcgaatttcaatcattcgattgcgttcaattgattcggcgttc
gattcgttcgattgacattgtCTGGACATAATCTGCGCGAAAATAAAAGG
GACGCGAAAATTAATGGAATTAAGGTAtataaattaaactttttataCAT
AGTTTGACTTTGTTTATTTAACAGTCTCTCCTACAGTATaccaggattag
aaactaggctagtcttacatCTTCCCCTTGCAAAagtacaatgctgacaa
gttgactcACGACCCTGGACGTCGCCGTACATTGGGTggtggtgtacggt
ggggctggatctaaatgtccgGTGGGAATTTTGGGTTAGGTTCGAAAACA
CCGTACACTTTCCCACCAGACATCAATATCCCCACCGTACAATTGGTAGT
CTGGCATCTTTAAGTGGACGGAAAGCAAAAAATGAGAAGTTCAACGATGT
GTACGGTGGGATTTTTAAGCTTCCTGGAAAGCTCCACCGTACTATGTCAG
GTGGGACCACCAAACTTTGTACGGTGGTGAAAATAAGTGaacttgaaatc
cactgtacaTCCCACCGTCAGTCAGGGAGATTCCTCAATTGTGGTATACA
GCAATTGTGGTAGGTTTCATTTGTGgttagcctacaaaggcttataactG
CTACCtatagtgctggtcgacaaagataaacaaacttCGACTGTATAAAA
TCATAGgagaagaaagcttttctttattaaaagaatctgatctacgaaaa
atatattttgtctgtgcgttaaaaagatataaTCAATTATGAACAAAAGT
TGCCTGTTTTCTCCCTGAAACTTTCTGTTTCTtgaatatactgcaattgc
ggtatattaaaaagtgtaaaagtgacgtttatacCGCGATTGCAGTATAA
AATTACTACTGCAATCGAGAGCCTGACCGTACCCACTGTACATCACCGTA
CAATGTACGATACAGCGGTGTCCAGGGTCATTATGTTGACACAACATATT
GACATGTATGTAAATTGatgtactttaggcgtagaaacttttttgagcag
aaactttcgcaagaacgaaaaatcgcgaaattcacgacatttacttttgc
gaatttgacggaaaaatcttttttgctaGCATagactttcgcgaatcaag
acgtaaaaatgagaattttcacattaaaaatggcttagaggggcAATATT
TCTTGGATTGAACTctttagtcttttagcaggctaaaaagtgccataaat
gtTACATTTCATTCAAAGCTTGAAGTTTTAAGGGCTCCTTaaactacaca
atatattgacaaacaatattcaacaatatggtttgcggaccataatgtac
gaagtaaacaactggtactctattataaaaaggaattttctttctgtaaa
atccccctatattgttgaaatattgcaaatcgagctgacaatatattgca
agcatgttttcaatatattgcccaCATTCAGCAATACttcgtcaatatat
tgcctgacaatatattgtctagtgtatgtagccctttacagattttctgt
tttgtcagcaattttttgcgagcataaacttacGCGAATgacccttccta
gaatttttaaatacattattttactttcgcgaaaagggctaaaGTTTGCG
AAAATCCCAAtatttatattgaaatctgcaacaaaaacaaaagtggtctc
ttctactgattgcttttTGGTGCTCCTTTGCAGACTATTTATCacatttc
caccaatgagattgccgcATTTCACATCACATGGCCCTCTTTTTTTGCac
ccgtggcctctcagtgccttgcacaacAGGCGGCTATAAAATCTCACCCT
TCATTATATTAAATTGGCCCGCACTCAAAATCTCATAATCTTGatacaag
tttaagtctatattatatatactgtttaaaattcaaatataatctatcta
tctatatatttcatactaAAAGGTCCTAGGACCCATTATCCGTATATACa
tttgtttgttaaaaaaaagaaatatgaataaataaataaataaataaaat
gttaagagcaataaaatgttttaaaattttgattaatgCTTAATAACGAG
AAGAAAAGAATAAATAGGATTAGTGGATAACCAAGCATGCAGCCCTGCGT
GCTGTTATAGATCGTGCTTGAGACTAGGTTTGATATAGAGAAGTACTAAA
AGAAGTACTTAAAGCTAGCAGAAAGAATTCAAACTTGTAGTAGCCTCAGT
GCTGGGGCAAGCATAGGATGAGCAGCCATAAACAACGAAATACAAAGACC
CTTCCCACAttgagtaatttttttttctcctagtttctctAGGTGACACA
AtggatttcaaaagtttcttctttgtttggttgtttttgtTTGCCAATCA
AACCACAGCTGGCAGAGAGCATGATGATTTCCCAAAAGACGATTACAAAA
CCTTCTTCAAAGATCTGAATGAGGCTCTTGGGTTGGAACAATTACTGGAT
ACCATTGGCTTCTATTTCAGGTTGGTTTTTAATTTCAGTAATTGTGTACT
GCTTGGGAATTCATATAACCAACTTCCTGTATTACTTTGACGAAAACACT
CCTCCTTTTAAATGCCCATCGAATAAACACCTCttaagttaaaaattttt
ttctcgataaaCCCCCCTTCTCAAATAAACGCCTCCCCTCCAGGAGGatt
gtttatttgaaacaaagTACCTtgttaagggaagaaatttctgcggaaag
aaaattttggtgGATCTGGTggatttagccaaattttattttttcaagcc
acccgtcaaattaaattccctctgagaAAACTCTTTTTGACCATTTGcaa
aattcccgccaaaatttttcTCTTCAAGAAGAACTTTGTTAAAAGTATTg
atattttattgttctaacTATTTCGACCCAATTCTACATCGCTAATGACA
TTATCTCAAAAAAGACCCAAAAGGCAAACCATGTCTCCCTTTAAATTTAT
AAAGATGACCCCCCCCCATCGAATAAATGTTCCtcctaaaagtttttttg
atacTAACAAAGTATAAAAATttactttagaaaaaattagcattttgttt
gataacATACAATGATGTTCATATCGTAGAACGTACATCAGAATAGGGCA
AGCATACACGTGGCAGAAGTTCAATAATGATTGGAAAGATTTGCAGATAT
CACCCTCTGTGTTCAAGTTATTCCATTTCATACACAAGTTGTTTTGGGTT
GCAATTTCACAAACCGGTGTGAAGTTGATTCATGCCATGAGGGATGGTCA
GGTCTTCTTATTGCgcttcttgaaaaagaaatgtgACAAGACACTGGATA
AGAATTGTAAGTAGAAAAAATTTTGACGcctatgatttttttttaatgtt
agtATTAtacgagcccccccccccccaagcggTGTGCGTGACTACGtggt
tttgaaatttctttctttgtgattgcgtgatgagaggtcaaaacgtgatc
gtgatttgaaaagtttttaagccGTAATACGTGATTCTtgaactttttca
aagggatgcgtgattagCCGTTTTAtttgctgattttcgtgatcgtgatt
gaagacaaaaatttgcgtgatatcgtgatcagagttaccgctggggAGGC
CTCTTAAACAGATTTTACCAAAAGACTATGACTAGTACTATAAGGGTGAG
TGGTACCGAGAAATATCATTGACAAAAAGACAATATGGCAGGAATAACTT
TAAGTAAAATTTGATAATTGtgatttatgatgaaattaatGTGCTATTGT
ATccacttttcttttcaaaaaacacACGTTGTAACTTTGTAAGATACAAA
AtgtctttttcttcaaaaatatgcAACGGTGCCAATTTTCTGtcaatttt
cttaaatattCTTGACGGAATATCATCATTCATAGGGACGCTTATTCGCA
AAACTTGCGGATTTGGAGAAGTATTATATTAGGGTTAGTACTGGTACagc
attttgtatttttctcatattttctAGCTGCACTCCACCCATGGAATGTT
CTGATGGAGCAAAACGAACAAAGCGTCTCATTTCTGGTGTTTGTATATGG
TCTCATGATTTCTTTGATCCTCATCAAAATATTGAGCTGGTGGAATTTTA
TGGTCTATCTAGCATTCGGCTTTCTTGTATACTCTTTTGGTGGACCATAC
ATGGTATTTAAGTGGTAAGTAAGCTTTGAGACCACTGAGCTTTATATAGA
CCCTGGAGGCAGTTTCTCAATCCcaaccaagcaaaatcttttaatCGGAG
TTTCTTTTAAAGTAGTACCTGCACCAAGAGCGCTAGatccgaggggtaaa
tcacttcgaaaaaagcgtacgaaatgatttttgatttttgatttttttgt
gattttttgattttttctgtgattttttgatttttttgNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtttgtgatttttttgtgatttttttgtgatttttga
ttttttgcgtgatttttttgtgatttttctaagaagtgtacgagattttt
tcgagtaatttacccctcgGCTAGATCTACTTTGCTTTCACACTAGTGAT
atagcgccgtttgtcgttagACGAGTTTTAACATTACAATGGGTTCTCTG
CAGGTACAGTTttaaaaacttcgatcaaaaatggcggatatagcttgatc
cagggtttataaaggtcagtgtttgagacacccctatctcacagTCTCGG
TGGCACTTCCCCTCACGATGAAAATTATTTCCATCGAAACCCAATGTGGA
TCGAAATTCTTTTTTCCATCGAATTTTAAATTGGGATGAAAACAAGGTCA
ATGTTCAAGTGGGACTAAAACTGTTCCTTTAATGGGATGGACTTTTGCGG
GGCACTTAATTTCACGGATGACGCTATtgggagacaatattttcacgact
CTGTGCCTTTTACTGTCAAACAATGAATGTTGATTGTTGAAATATGCATT
ATTAGCGCTTGTTTGATACCATCAAGCATTTTTATAAGTAGCTTAATTGT
TTGCTTTAAGTATTTTGCGGATAAGGCCTTTCTAAATTTCCattgacacc
caaatccgcaaattttaatccccgcgaaattttatcccatcaTAGTATAT
CCCCCGTGGACGAAATCTTGGGCAAATTTTACAGTGTGGtagggtcccac
cgggtctgcaTTGGTTCTCATAATAATCATCCagttaaaaattgtaaatt
actacaaattaaattgaatttttcaagtTGTGTGAGATTGTACTAGGACT
TTTGAATtccatttttgatggaaaaaaGAATCCAAACAACCACCATTCTG
GCAAAGATTAATCATTTTTAAGACCAAATGGCGAATTTTTAAAATCCAGA
AATTCTTGTGATTTTTATGCTCCAGAAATTTAATCTGAtttaaaatcata
ttttttctCTTGTAATCCCTTCTTTCCTGAGCTTTCGATTAGAATTAGAA
AGGAGCTTTACTATCAGGAACTGACAGAAATATTTCCAACTTATGGTTCT
AAACTTTCCCACATCTTTTATTCGTTCATGATTCGGAAAGTAAGAACCAT
TTCTTCCTTGAAAATTTTATCTATCGGCTGCTATAGTTTTACATTAATAT
CTTTAGTTACGTTTGTAGTATGTTTCGTCGTTTTGGGTAAAATTCCATTC
CCGGACTTAGATTCTACTACCTTTTCCGGAAAAAAATTCGCTGCTGTTTC
CTAAAGGTATGGAAAATTTTGTGTTCACTTAAGAAACTGTCTAACTTCCC
GAAGCTTATTCTTGAACTACCTGGAGTTCCGGTATATTCCGCTAGAAAAA
TAACAGTGGAATCTTATTCCGGGAAGTTGAATCTTAACCCTAAACAACGT
tacattttttcatcttttaggCTATTAACCATCAcagctttgttttggtt
tatatTCGATTTTGTGTTGACCTACCCTTTTCAAACAGCAATTGCTATTT
TAACACTATACGGTATGGTTCATATAACCTGGCTTCTACGTAGCATTGTC
AACCTCTTTTTTGGGCGTTCAGACACGCCCCCGCCCACGCCAAGACATTA
TAGAGATTATCCTGATGCTTCTCCGCCGAGGGCGCGACATCGGGCGGAGG
GTGAATTCACAGATTTGACGAATCGGATAGATGGTATGGAGAGACGAACG
GAACTTTTAAACGATCGGTTGGACCAATTAAGCCGGTCTATGGAAAGAGT
ACTACAAAATATGGGAGACGAAGACTCTGATTAGTAAATGATTGTTGGTT
CAATCTCAGAGATTAAGACGTTCTACAAAATATGGGAGATTAATCTGATT
AGTATTAATGATTTGTTTACTTAATTTTTGAGTAGATTCTTTTGAGCAAG
CACTTTATAACCTATTATACCTAAAATTGAGTAGACActcattgggctct
tccagaaaatgcaCGCACATGGACATAGTgaaggatatagtgtccggggt
agtgaaaaatccacaaaatttgccttgtctggTGGTgggcaaacttgctc
tgttcaagggtaattttgctctgtttgagggtaattttgaatgtccaggt
ggtcaactgatgcttgtcagGGGGGGTTAGACCAgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057168TCONS_00057168Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057168-proteinTCONS_00057168-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:34619..44754 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.88	45.89	33.42	31.37	11.46	9.28	9.25	10.46	7.96	10.16	7.91	6.84	4.74	5.51	7.4	9.05	7.9	8.78	3.84	4.59	5.04	4.83	25.63	22.67	7.36	8.66	9.77	8.71	25.77	25.61